RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TACC3Q9Y6A5 838 aa10.07□□□□□ -0.8
SYNE3-205ENST00000557275 KRT83P78385 493 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 MRVI1Q9Y6F6 885 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 INTS8Q75QN2 995 aaKnown RBP10.06□□□□□ -0.8
SYNE3-205ENST00000557275 ANKRD24Q8TF21 1146 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 UTP14AQ9BVJ6 771 aaKnown RBP10.06□□□□□ -0.8
SYNE3-205ENST00000557275 SCLT1Q96NL6 688 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 PSME1Q06323 249 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
SYNE3-205ENST00000557275 BICDL1Q6ZP65 573 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 ELL2O00472 640 aaPredicted RBP10.06□□□□□ -0.8
SYNE3-205ENST00000557275 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 SYNCQ9H7C4 482 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 FAM76AQ8TAV0 307 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 APAF1O14727 1248 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 HSP90AA5PQ58FG0 334 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 PRPF4BQ13523 1007 aaKnown RBP10.06□□□□□ -0.8
SYNE3-205ENST00000557275 SLC4A8Q2Y0W8 1093 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC144CPQ8IYA2 1237 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 STX6O43752 255 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 PCK1P35558 622 aa10.06□□□□□ -0.8
SYNE3-205ENST00000557275 ATF3P18847 181 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 CALCOCO2Q13137 446 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 CETN3O15182 167 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 VPS52Q8N1B4 723 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 ATRIPQ8WXE1 791 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 NOP2P46087 812 aaKnown RBP10.05□□□□□ -0.8
SYNE3-205ENST00000557275 GIPC1O14908 333 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 RNF8O76064 485 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC40Q4G0X9 1142 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 IMPG2Q9BZV3 1241 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 RSPH14Q9UHP6 348 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 RSPH3Q86UC2 560 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 ERMNQ8TAM6 284 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 NKIRAS1Q9NYS0 192 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 ATP6V1E1P36543 226 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 SEPT8Q92599 483 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 GPRASP1Q5JY77 1395 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
SYNE3-205ENST00000557275 IQCA1Q86XH1 822 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC89Q8N998 374 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
SYNE3-205ENST00000557275 RAB11FIP3O75154 756 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 MICALL1Q8N3F8 863 aa10.05□□□□□ -0.8
SYNE3-205ENST00000557275 NOC2LQ9Y3T9 749 aaKnown RBP10.05□□□□□ -0.8
SYNE3-205ENST00000557275 ST20-MTHFSA0A0A6YYL1 179 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 ARMC9Q7Z3E5 817 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 SH3BP5O60239 455 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 CNNM3Q8NE01 707 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC96Q2M329 555 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 HNRNPMP52272 730 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYNE3-205ENST00000557275 ZSCAN16Q9H4T2 348 aaPredicted RBP10.04□□□□□ -0.8
SYNE3-205ENST00000557275 USP5P45974 858 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 RILPL1Q5EBL4 403 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 ZC3H15Q8WU90 426 aaKnown RBP10.04□□□□□ -0.8
SYNE3-205ENST00000557275 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 C8orf76Q96K31 380 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 RBBP5Q15291 538 aaKnown RBP10.04□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC63Q8NA47 563 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.04□□□□□ -0.8
SYNE3-205ENST00000557275 MYO10Q9HD67 2058 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 MTIF2P46199 727 aaKnown RBP10.04□□□□□ -0.8
SYNE3-205ENST00000557275 TNNC1P63316 161 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 ATF7IPQ6VMQ6 1270 aa10.04□□□□□ -0.8
SYNE3-205ENST00000557275 INF2Q27J81 1249 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 HDXQ7Z353 690 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 UBE2HP62256 183 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 NAA16Q6N069 864 aaPredicted RBP10.03□□□□□ -0.8
SYNE3-205ENST00000557275 CCT6BQ92526 530 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 MCUR1Q96AQ8 359 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 CCDC194A0A1B0GVG4 234 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 SMARCC2Q8TAQ2 1214 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 AIDAQ96BJ3 306 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 GOLGA8QA0A0J9YX86 632 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 GOLGA8OA6NCC3 632 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 GOLGA8NF8WBI6 632 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
SYNE3-205ENST00000557275 DRC3Q9H069 523 aa10.03□□□□□ -0.8
SYNE3-205ENST00000557275 SDCCAG8Q86SQ7 713 aaPredicted RBP10.02□□□□□ -0.8
SYNE3-205ENST00000557275 NLRP5P59047 1200 aa10.02□□□□□ -0.81
SYNE3-205ENST00000557275 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
SYNE3-205ENST00000557275 CEP85LQ5SZL2 805 aa10.02□□□□□ -0.81
SYNE3-205ENST00000557275 PLEKHO1Q53GL0 409 aaPredicted RBP10.02□□□□□ -0.81
SYNE3-205ENST00000557275 SPC25Q9HBM1 224 aa10.02□□□□□ -0.81
SYNE3-205ENST00000557275 MTMR7Q9Y216 660 aa10.02□□□□□ -0.81
SYNE3-205ENST00000557275 GNG11P61952 73 aa10.02□□□□□ -0.81
SYNE3-205ENST00000557275 BICD1Q96G01 975 aa10.02□□□□□ -0.81
SYNE3-205ENST00000557275 AKR1B10O60218 316 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 RNF10Q8N5U6 811 aaKnown RBP10.01□□□□□ -0.81
SYNE3-205ENST00000557275 PDCD7Q8N8D1 485 aaKnown RBP10.01□□□□□ -0.81
SYNE3-205ENST00000557275 ATP2A3Q93084 1043 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 SYCP3Q8IZU3 236 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 CCDC26Q8TAB7 109 aa10.01□□□□□ -0.81
SYNE3-205ENST00000557275 GSTA5Q7RTV2 222 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms