RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 TONSLQ96HA7 1378 aa8.44□□□□□ -1.06
FOXN3-215ENST00000557261 COL19A1Q14993 1142 aa8.43□□□□□ -1.06
FOXN3-215ENST00000557261 GIMAP6Q6P9H5 292 aa8.43□□□□□ -1.06
FOXN3-215ENST00000557261 METTL16Q86W50 562 aaKnown RBP8.43□□□□□ -1.06
FOXN3-215ENST00000557261 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
FOXN3-215ENST00000557261 PTPRTO14522 1441 aa8.43□□□□□ -1.06
FOXN3-215ENST00000557261 ABCC3O15438 1527 aa8.43□□□□□ -1.06
FOXN3-215ENST00000557261 ESPNB1AK53 854 aa8.42□□□□□ -1.06
FOXN3-215ENST00000557261 TMEM229AB2RXF0 380 aa8.42□□□□□ -1.06
FOXN3-215ENST00000557261 SCAMP3O14828 347 aaKnown RBP8.42□□□□□ -1.06
FOXN3-215ENST00000557261 PPEF1O14829 653 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-215ENST00000557261 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
FOXN3-215ENST00000557261 EMID1Q96A84 441 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-215ENST00000557261 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
FOXN3-215ENST00000557261 ARHGAP31Q2M1Z3 1444 aa8.41□□□□□ -1.06
FOXN3-215ENST00000557261 PPM1GO15355 546 aaPredicted RBP8.41□□□□□ -1.06
FOXN3-215ENST00000557261 TREHO43280 583 aa8.41□□□□□ -1.06
FOXN3-215ENST00000557261 NPR3P17342 541 aa8.41□□□□□ -1.06
FOXN3-215ENST00000557261 FMR1Q06787 632 aaKnown RBP eCLIP8.41□□□□□ -1.06
FOXN3-215ENST00000557261 ANKLE1Q8NAG6 615 aa8.41□□□□□ -1.06
FOXN3-215ENST00000557261 SCG3Q8WXD2 468 aaKnown RBP8.41□□□□□ -1.06
FOXN3-215ENST00000557261 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
FOXN3-215ENST00000557261 RBCK1Q9BYM8 510 aa8.41□□□□□ -1.06
FOXN3-215ENST00000557261 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
FOXN3-215ENST00000557261 PIK3C2BO00750 1634 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 LAMC1P11047 1609 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 PLA2R1Q13018 1463 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 CCDC144AA2RUR9 1427 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 UHRF1BP1Q6BDS2 1440 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 PTCD1O75127 700 aaKnown RBP8.4□□□□□ -1.06
FOXN3-215ENST00000557261 SLC19A1P41440 591 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 MAPK8P45983 427 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 USP4Q13107 963 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 DSC3Q14574 896 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 AGERQ15109 404 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 NT5DC4Q86YG4 428 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 TMEM87AQ8NBN3 555 aa8.4□□□□□ -1.06
FOXN3-215ENST00000557261 DNAJC2Q99543 621 aaKnown RBP8.4□□□□□ -1.06
FOXN3-215ENST00000557261 KIF1BO60333 1816 aa8.4□□□□□ -1.07
FOXN3-215ENST00000557261 POLR1AO95602 1720 aaPredicted RBP8.4□□□□□ -1.07
FOXN3-215ENST00000557261 IFT172Q9UG01 1749 aa8.4□□□□□ -1.07
FOXN3-215ENST00000557261 MROH2AA6NES4 1674 aa8.4□□□□□ -1.07
FOXN3-215ENST00000557261 YEATS2Q9ULM3 1422 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 FZD6O60353 706 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 IGHA2P01877 340 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 LDHBP07195 334 aaKnown RBP8.39□□□□□ -1.07
FOXN3-215ENST00000557261 SF3A1Q15459 793 aaKnown RBP8.39□□□□□ -1.07
FOXN3-215ENST00000557261 FAM26DQ5JW98 314 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 TBCELQ5QJ74 424 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 DPH6Q7L8W6 267 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 DHX38Q92620 1227 aaKnown RBP8.39□□□□□ -1.07
FOXN3-215ENST00000557261 SLC10A4Q96EP9 437 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 TINF2Q9BSI4 451 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 SLC6A16Q9GZN6 736 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 CLTCL1P53675 1640 aa8.39□□□□□ -1.07
FOXN3-215ENST00000557261 CNTLNQ9NXG0 1405 aa8.38□□□□□ -1.07
FOXN3-215ENST00000557261 KIAA1210Q9ULL0 1709 aa8.38□□□□□ -1.07
FOXN3-215ENST00000557261 M0R2N6 131 aa8.38□□□□□ -1.07
FOXN3-215ENST00000557261 FAM13AO94988 1023 aa8.38□□□□□ -1.07
FOXN3-215ENST00000557261 NBPF20Q3BBV1 942 aa8.38□□□□□ -1.07
FOXN3-215ENST00000557261 TMC1Q8TDI8 760 aa8.38□□□□□ -1.07
FOXN3-215ENST00000557261 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
FOXN3-215ENST00000557261 SIGLEC1Q9BZZ2 1709 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 GPR182O15218 404 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 IGFBP4P22692 258 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 TNNI2P48788 182 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 SCNN1DP51172 638 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 RNF20Q5VTR2 975 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 SPRYD7Q5W111 196 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 TRIM67Q6ZTA4 783 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 ZNF511Q8NB15 262 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 SIN3AQ96ST3 1273 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 C1QTNF2Q9BXJ5 285 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 ADGRB3O60242 1522 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 RALGAPBQ86X10 1494 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 SPATA31E1Q6ZUB1 1445 aa8.37□□□□□ -1.07
FOXN3-215ENST00000557261 KDM5AP29375 1690 aaKnown RBP8.37□□□□□ -1.07
FOXN3-215ENST00000557261 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 A0A1W2PRU2 124 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 RAPGEF3O95398 923 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 EIF1AXP47813 144 aaKnown RBP8.36□□□□□ -1.07
FOXN3-215ENST00000557261 FANCCQ00597 558 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 EHHADHQ08426 723 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 LIAT1Q6ZQX7 453 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 ATCAYQ86WG3 371 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 COL26A1Q96A83 441 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 TANGO6Q9C0B7 1094 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 ACBD3Q9H3P7 528 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 BRPF3Q9ULD4 1205 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 NOS1P29475 1434 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 NPATQ14207 1427 aa8.36□□□□□ -1.07
FOXN3-215ENST00000557261 ATAD2Q6PL18 1390 aa8.35□□□□□ -1.07
FOXN3-215ENST00000557261 ZBTB39O15060 712 aa8.35□□□□□ -1.07
FOXN3-215ENST00000557261 KIF3BO15066 747 aa8.35□□□□□ -1.07
FOXN3-215ENST00000557261 NDUFB5O43674 189 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms