RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 RAB11FIP3O75154 756 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 FGD1P98174 961 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 NGLY1Q96IV0 654 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 BTG4Q9NY30 223 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 SMC3Q9UQE7 1217 aa14.94□□□□□ -0.02
APEX1-216ENST00000557159 LMO7Q8WWI1 1683 aa14.93□□□□□ -0.02
APEX1-216ENST00000557159 FAM208AQ9UK61 1670 aaKnown RBP14.93□□□□□ -0.02
APEX1-216ENST00000557159 MEX3CQ5U5Q3 659 aaKnown RBP14.93□□□□□ -0.02
APEX1-216ENST00000557159 RBM43Q6ZSC3 357 aaKnown RBP14.93□□□□□ -0.02
APEX1-216ENST00000557159 KCNB2Q92953 911 aa14.93□□□□□ -0.02
APEX1-216ENST00000557159 TM6SF1Q9BZW5 370 aa14.93□□□□□ -0.02
APEX1-216ENST00000557159 SNX14Q9Y5W7 946 aa14.93□□□□□ -0.02
APEX1-216ENST00000557159 SLIT2O94813 1529 aa14.93□□□□□ -0.02
APEX1-216ENST00000557159 COL14A1Q05707 1796 aaKnown RBP14.93□□□□□ -0.02
APEX1-216ENST00000557159 TRIM6-TRIM34B2RNG4 842 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 CDC25BP30305 580 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 GIMAP6Q6P9H5 292 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 MTMR6Q9Y217 621 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 ERBB3P21860 1342 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 AK2P54819 239 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 RUFY3Q7L099 469 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 RILPL2Q969X0 211 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 LSG1Q9H089 658 aaKnown RBP14.92□□□□□ -0.02
APEX1-216ENST00000557159 TSPYL4Q9UJ04 414 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 EXOC6BQ9Y2D4 811 aa14.92□□□□□ -0.02
APEX1-216ENST00000557159 BCL9LQ86UU0 1499 aa14.91□□□□□ -0.02
APEX1-216ENST00000557159 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
APEX1-216ENST00000557159 NEMFO60524 1076 aa14.91□□□□□ -0.02
APEX1-216ENST00000557159 MAP3K11Q16584 847 aa14.91□□□□□ -0.02
APEX1-216ENST00000557159 VPS53Q5VIR6 699 aa14.91□□□□□ -0.02
APEX1-216ENST00000557159 PLA2G4DQ86XP0 818 aa14.91□□□□□ -0.02
APEX1-216ENST00000557159 TDRD7Q8NHU6 1098 aaKnown RBP14.91□□□□□ -0.02
APEX1-216ENST00000557159 FAM53CQ9NYF3 392 aa14.91□□□□□ -0.02
APEX1-216ENST00000557159 LRRC37A3O60309 1634 aa14.9□□□□□ -0.02
APEX1-216ENST00000557159 COL5A2P05997 1499 aaPredicted RBP14.9□□□□□ -0.02
APEX1-216ENST00000557159 USP42Q9H9J4 1324 aaKnown RBP14.9□□□□□ -0.02
APEX1-216ENST00000557159 SLFNL1Q499Z3 407 aa14.9□□□□□ -0.02
APEX1-216ENST00000557159 MPNDQ8N594 471 aa14.9□□□□□ -0.02
APEX1-216ENST00000557159 KCND1Q9NSA2 647 aa14.9□□□□□ -0.02
APEX1-216ENST00000557159 FIBPO43427 364 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
APEX1-216ENST00000557159 SSH3Q8TE77 659 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 ANKRD24Q8TF21 1146 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 HYPKQ9NX55 129 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 MRVI1Q9Y6F6 885 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 RGPD5Q99666 1765 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 CCDC66A2RUB6 948 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 FAM177BA6PVY3 158 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 SLFN14P0C7P3 912 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 TYRO3Q06418 890 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 UNC5CLQ8IV45 518 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 NUP62CLQ9H1M0 184 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 DDX19AQ9NUU7 478 aaKnown RBP14.89□□□□□ -0.03
APEX1-216ENST00000557159 MAP3K5Q99683 1374 aa14.89□□□□□ -0.03
APEX1-216ENST00000557159 AFF2P51816 1311 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 NWD2Q9ULI1 1742 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 PTGS1P23219 599 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 EVA1CP58658 441 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 TAF7Q15545 349 aaPredicted RBP14.88□□□□□ -0.03
APEX1-216ENST00000557159 CCDC112Q8NEF3 446 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 KIF18AQ8NI77 898 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 PI4K2BQ8TCG2 481 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 STK31Q9BXU1 1019 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 USP21Q9UK80 565 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 PLCH1Q4KWH8 1693 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 WDR17Q8IZU2 1322 aa14.88□□□□□ -0.03
APEX1-216ENST00000557159 PNMA6EA0A0J9YXQ4 647 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 TNNT1P13805 278 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 PDCP20941 246 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 ZNF75DP51815 510 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 KRT85P78386 507 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 DNM1Q05193 864 aaKnown RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 FOXD4L6Q3SYB3 417 aaPredicted RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 ZSCAN25Q6NSZ9 544 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 FOXD4L3Q6VB84 417 aaPredicted RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 LTV1Q96GA3 475 aaPredicted RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 STRN4Q9NRL3 753 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 GJB2P29033 226 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 RBM6P78332 1123 aaKnown RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 TSHZ3Q63HK5 1081 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 LARP1Q6PKG0 1096 aaKnown RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 POTEAQ6S8J7 498 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 SARM1Q6SZW1 724 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 G2E3Q7L622 706 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 KRT222Q8N1A0 295 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 ZNF397Q8NF99 534 aaPredicted RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 SCAND2PQ9GZW5 306 aaPredicted RBP14.87□□□□□ -0.03
APEX1-216ENST00000557159 IL25Q9H293 177 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 ZSWIM6Q9HCJ5 1215 aa14.87□□□□□ -0.03
APEX1-216ENST00000557159 SLC20A2Q08357 652 aa14.86□□□□□ -0.03
APEX1-216ENST00000557159 POLA2Q14181 598 aa14.86□□□□□ -0.03
APEX1-216ENST00000557159 TERF2Q15554 542 aa14.86□□□□□ -0.03
APEX1-216ENST00000557159 RNF20Q5VTR2 975 aa14.86□□□□□ -0.03
APEX1-216ENST00000557159 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
APEX1-216ENST00000557159 ZNF771Q7L3S4 317 aaPredicted RBP14.86□□□□□ -0.03
APEX1-216ENST00000557159 CCDC186Q7Z3E2 898 aa14.86□□□□□ -0.03
APEX1-216ENST00000557159 SPC24Q8NBT2 197 aa14.86□□□□□ -0.03
APEX1-216ENST00000557159 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms