RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 PSMD1Q99460 953 aa12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 MIS18AQ9NYP9 233 aa12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 GJA3Q9Y6H8 435 aa12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 WDR33Q9C0J8 1336 aaKnown RBP12.05□□□□□ -0.48
HNRNPC-227ENST00000556897 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
HNRNPC-227ENST00000556897 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
HNRNPC-227ENST00000556897 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
HNRNPC-227ENST00000556897 COL4A5P29400 1685 aa12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 LMOD1P29536 600 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 EIF6P56537 245 aaKnown RBP12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 MAP2K1Q02750 393 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 TAF7Q15545 349 aaPredicted RBP12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 SLC51AQ86UW1 340 aa12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 ABHD8Q96I13 439 aa12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 NYXQ9GZU5 481 aa12.03□□□□□ -0.48
HNRNPC-227ENST00000556897 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-227ENST00000556897 EPS15P42566 896 aa12.02□□□□□ -0.49
HNRNPC-227ENST00000556897 SCNN1DP51172 638 aa12.02□□□□□ -0.49
HNRNPC-227ENST00000556897 CC2D2BQ6DHV5 1058 aa12.02□□□□□ -0.49
HNRNPC-227ENST00000556897 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.49
HNRNPC-227ENST00000556897 RPGRQ92834 1020 aaKnown RBP12.02□□□□□ -0.49
HNRNPC-227ENST00000556897 LTBP1Q14766 1721 aa12.02□□□□□ -0.49
HNRNPC-227ENST00000556897 ERVV-1B6SEH8 477 aa12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 GPTP24298 496 aa12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 PPP2R1AP30153 589 aa12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 HOXA10P31260 410 aaPredicted RBP12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 GRM1Q13255 1194 aa12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 CAPNS2Q96L46 248 aa12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 MAP3K15Q6ZN16 1313 aa12.01□□□□□ -0.49
HNRNPC-227ENST00000556897 TRAF5O00463 557 aa12□□□□□ -0.49
HNRNPC-227ENST00000556897 SUSD4Q5VX71 490 aa12□□□□□ -0.49
HNRNPC-227ENST00000556897 KIF6Q6ZMV9 814 aa12□□□□□ -0.49
HNRNPC-227ENST00000556897 TTLL7Q6ZT98 887 aa12□□□□□ -0.49
HNRNPC-227ENST00000556897 ZBTB3Q9H5J0 574 aa12□□□□□ -0.49
HNRNPC-227ENST00000556897 RRP7AQ9Y3A4 280 aaKnown RBP12□□□□□ -0.49
HNRNPC-227ENST00000556897 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
HNRNPC-227ENST00000556897 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
HNRNPC-227ENST00000556897 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 MYL6BP14649 208 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 ECE1P42892 770 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 CST9Q5W186 159 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 CYP4F22Q6NT55 531 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 NIM1KQ8IY84 436 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 GPR101Q96P66 508 aaPredicted RBP11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 CRAMP1Q96RY5 1269 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 NUP98P52948 1817 aa11.99□□□□□ -0.49
HNRNPC-227ENST00000556897 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
HNRNPC-227ENST00000556897 IBTKQ9P2D0 1353 aaPredicted RBP11.98□□□□□ -0.49
HNRNPC-227ENST00000556897 EIF4A1P60842 406 aaKnown RBP11.98□□□□□ -0.49
HNRNPC-227ENST00000556897 USP50Q70EL3 339 aaPredicted RBP11.98□□□□□ -0.49
HNRNPC-227ENST00000556897 THSD7BQ9C0I4 1608 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 NTSR2O95665 410 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 AOC3Q16853 763 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 ZNF34Q8IZ26 560 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 THUMPD2Q9BTF0 503 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 GPRC5DQ9NZD1 345 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 TSKSQ9UJT2 592 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 TLL2Q9Y6L7 1015 aa11.97□□□□□ -0.49
HNRNPC-227ENST00000556897 CCDC85CA6NKD9 419 aa11.96□□□□□ -0.49
HNRNPC-227ENST00000556897 TMX4Q9H1E5 349 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-227ENST00000556897 ATP6V0A2Q9Y487 856 aa11.96□□□□□ -0.49
HNRNPC-227ENST00000556897 TRPM7Q96QT4 1865 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 KDM3BQ7LBC6 1761 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 AOC2O75106 756 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 NEFMP07197 916 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 CXCL9Q07325 125 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 GIGYF2Q6Y7W6 1299 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 SAPCD2Q86UD0 394 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 NLRP3Q96P20 1036 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 ADARB2Q9NS39 739 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 ZNRF3Q9ULT6 936 aa11.95□□□□□ -0.5
HNRNPC-227ENST00000556897 DLG5Q8TDM6 1919 aa11.94□□□□□ -0.5
HNRNPC-227ENST00000556897 CELF2O95319 508 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-227ENST00000556897 SLC34A2O95436 690 aa11.94□□□□□ -0.5
HNRNPC-227ENST00000556897 MAP2K2P36507 400 aa11.94□□□□□ -0.5
HNRNPC-227ENST00000556897 GMPSP49915 693 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-227ENST00000556897 PPP1R42Q7Z4L9 355 aa11.94□□□□□ -0.5
HNRNPC-227ENST00000556897 GLIS2Q9BZE0 524 aaPredicted RBP11.94□□□□□ -0.5
HNRNPC-227ENST00000556897 ABCC4O15439 1325 aa11.93□□□□□ -0.5
HNRNPC-227ENST00000556897 MLLT1Q03111 559 aaPredicted RBP11.93□□□□□ -0.5
HNRNPC-227ENST00000556897 PARP10Q53GL7 1025 aa11.93□□□□□ -0.5
HNRNPC-227ENST00000556897 SLC10A5Q5PT55 438 aa11.93□□□□□ -0.5
HNRNPC-227ENST00000556897 PLEKHF1Q96S99 279 aa11.93□□□□□ -0.5
HNRNPC-227ENST00000556897 UTP14AQ9BVJ6 771 aaKnown RBP11.93□□□□□ -0.5
HNRNPC-227ENST00000556897 VPS33BQ9H267 617 aa11.93□□□□□ -0.5
HNRNPC-227ENST00000556897 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 PDIA6Q15084 440 aa11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
HNRNPC-227ENST00000556897 PROSER3Q2NL68 480 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms