RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 ZBTB33Q86T24 672 aa6.5□□□□□ -1.37
PCNX1-214ENST00000556849 DZIP3Q86Y13 1208 aaKnown RBP6.5□□□□□ -1.37
PCNX1-214ENST00000556849 TIGD1Q96MW7 591 aa6.5□□□□□ -1.37
PCNX1-214ENST00000556849 HINFPQ9BQA5 517 aa6.5□□□□□ -1.37
PCNX1-214ENST00000556849 TANGO6Q9C0B7 1094 aa6.5□□□□□ -1.37
PCNX1-214ENST00000556849 TGIF2Q9GZN2 237 aa6.5□□□□□ -1.37
PCNX1-214ENST00000556849 DIAPH3Q9NSV4 1193 aa6.5□□□□□ -1.37
PCNX1-214ENST00000556849 HMGXB3Q12766 1538 aa6.5□□□□□ -1.37
PCNX1-214ENST00000556849 CUL7Q14999 1698 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 COL17A1Q9UMD9 1497 aaPredicted RBP6.49□□□□□ -1.37
PCNX1-214ENST00000556849 SFI1A8K8P3 1242 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 TREHO43280 583 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 BAG4O95429 457 aaKnown RBP6.49□□□□□ -1.37
PCNX1-214ENST00000556849 TPM3P06753 285 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 PSME1Q06323 249 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 USP4Q13107 963 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 OXLD1Q5BKU9 147 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 BLOC1S3Q6QNY0 202 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 LRSAM1Q6UWE0 723 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 CCDC85AQ96PX6 553 aaPredicted RBP6.49□□□□□ -1.37
PCNX1-214ENST00000556849 CARD11Q9BXL7 1154 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 PANK3Q9H999 370 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 GEMIN8Q9NWZ8 242 aaKnown RBP6.49□□□□□ -1.37
PCNX1-214ENST00000556849 SEPT3Q9UH03 358 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 PDZRN3Q9UPQ7 1066 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 PCDHGA11Q9Y5H2 935 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 DDX49Q9Y6V7 483 aaKnown RBP6.49□□□□□ -1.37
PCNX1-214ENST00000556849 UNC13AQ9UPW8 1703 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 DNMT1P26358 1616 aaKnown RBP6.49□□□□□ -1.37
PCNX1-214ENST00000556849 DAPK1P53355 1430 aa6.49□□□□□ -1.37
PCNX1-214ENST00000556849 CLGNO14967 610 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 PRPF40AO75400 957 aaKnown RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 CYP2E1P05181 493 aaPredicted RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 SLFN14P0C7P3 912 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 HOXB1P14653 301 aaPredicted RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 EMP3P54852 163 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 RAD51AP2Q09MP3 1159 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 FKBP5Q13451 457 aaPredicted RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 GNL2Q13823 731 aaKnown RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 ZSCAN23Q3MJ62 389 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 TSGA10IPQ3SY00 556 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 GIMAP6Q6P9H5 292 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 CTR9Q6PD62 1173 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 TMC7Q7Z402 723 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 FAM184AQ8NB25 1140 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 TMEM87AQ8NBN3 555 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 NBPF3Q9H094 633 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 RBSNQ9H1K0 784 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 MORC2Q9Y6X9 1032 aaPredicted RBP6.48□□□□□ -1.37
PCNX1-214ENST00000556849 REREQ9P2R6 1566 aa6.48□□□□□ -1.37
PCNX1-214ENST00000556849 ADGRL2O95490 1459 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 GRIN2AQ12879 1464 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 SCAF11Q99590 1463 aaKnown RBP6.47□□□□□ -1.37
PCNX1-214ENST00000556849 KANK1Q14678 1352 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 ST20-MTHFSA0A0A6YYL1 179 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 K7ELQ4 463 aaPredicted RBP6.47□□□□□ -1.37
PCNX1-214ENST00000556849 FOXO3O43524 673 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 NR1I2O75469 434 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 ATP2B1P20020 1258 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 HDAC1Q13547 482 aaPredicted RBP6.47□□□□□ -1.37
PCNX1-214ENST00000556849 NOLC1Q14978 699 aaKnown RBP eCLIP6.47□□□□□ -1.37
PCNX1-214ENST00000556849 MSS51Q4VC12 460 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 ZNF771Q7L3S4 317 aaPredicted RBP6.47□□□□□ -1.37
PCNX1-214ENST00000556849 TMC4Q7Z404 712 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 METTL16Q86W50 562 aaKnown RBP6.47□□□□□ -1.37
PCNX1-214ENST00000556849 NT5DC4Q86YG4 428 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 RNF34Q969K3 372 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 THAP11Q96EK4 314 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 DMRTB1Q96MA1 342 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 HS3ST6Q96QI5 342 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 TINF2Q9BSI4 451 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 MKNK1Q9BUB5 465 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 LMBRD1Q9NUN5 540 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 CGNQ9P2M7 1197 aaKnown RBP6.47□□□□□ -1.37
PCNX1-214ENST00000556849 ADAMTS8Q9UP79 889 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 PTPRGP23470 1445 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 BICRAQ9NZM4 1560 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 RAD50Q92878 1312 aa6.47□□□□□ -1.37
PCNX1-214ENST00000556849 KDM5DQ9BY66 1539 aa6.46□□□□□ -1.37
PCNX1-214ENST00000556849 ARHGAP33O14559 1287 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 ABCC5O15440 1437 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 SORBS3O60504 671 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 MBD3O95983 291 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 IGFBP4P22692 258 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 PLCB3Q01970 1234 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 WDR43Q15061 677 aaKnown RBP eCLIP6.46□□□□□ -1.38
PCNX1-214ENST00000556849 CEP170Q5SW79 1584 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 SH3BP5LQ7L8J4 393 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 NUDT12Q9BQG2 462 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 CCSER2Q9H7U1 834 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.46□□□□□ -1.38
PCNX1-214ENST00000556849 FAM53CQ9NYF3 392 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 PRKAG2Q9UGJ0 569 aa6.46□□□□□ -1.38
PCNX1-214ENST00000556849 DDX41Q9UJV9 622 aaKnown RBP6.46□□□□□ -1.38
PCNX1-214ENST00000556849 PRDM2Q13029 1718 aa6.45□□□□□ -1.38
PCNX1-214ENST00000556849 LRRIQ1Q96JM4 1722 aa6.45□□□□□ -1.38
PCNX1-214ENST00000556849 DXOO77932 396 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms