RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 GMPSP49915 693 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-242ENST00000556644 CDC37L1Q7L3B6 337 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 RASAL3Q86YV0 1011 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 RTKN2Q8IZC4 609 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 LARGE2Q8N3Y3 721 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 DEFB123Q8N688 67 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 FAM122AQ96E09 287 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 GGNBP2Q9H3C7 697 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 TERF2IPQ9NYB0 399 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 ZNF330Q9Y3S2 320 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-242ENST00000556644 TRIM17Q9Y577 477 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 UNC80Q8N2C7 3258 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 FLT4P35916 1363 aa6.04□□□□□ -1.44
ATXN3-242ENST00000556644 LAMB4A4D0S4 1761 aa6.03□□□□□ -1.44
ATXN3-242ENST00000556644 RBBP6Q7Z6E9 1792 aaKnown RBP6.03□□□□□ -1.44
ATXN3-242ENST00000556644 ANKRD26Q9UPS8 1709 aa6.03□□□□□ -1.44
ATXN3-242ENST00000556644 ERVV-2B6SEH9 535 aa6.03□□□□□ -1.44
ATXN3-242ENST00000556644 FKTNO75072 461 aa6.03□□□□□ -1.44
ATXN3-242ENST00000556644 ST5P78524 1137 aa6.03□□□□□ -1.44
ATXN3-242ENST00000556644 INTS3Q68E01 1043 aaKnown RBP6.03□□□□□ -1.44
ATXN3-242ENST00000556644 C2orf69Q8N8R5 385 aa6.03□□□□□ -1.44
ATXN3-242ENST00000556644 HTTP42858 3142 aa6.03□□□□□ -1.44
ATXN3-242ENST00000556644 ERBB4Q15303 1308 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 NCAPD2Q15021 1401 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 PPM1GO15355 546 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-242ENST00000556644 CYP19A1P11511 503 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-242ENST00000556644 NPR1P16066 1061 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 MKRN3Q13064 507 aaKnown RBP6.02□□□□□ -1.45
ATXN3-242ENST00000556644 OTOP1Q7RTM1 612 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 KRT26Q7Z3Y9 468 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 NIM1KQ8IY84 436 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 NFATC2IPQ8NCF5 419 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 DPF3Q92784 378 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 EYA1Q99502 592 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 PRO3102Q9H379 93 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 PGAP2Q9UHJ9 254 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 TBC1D2BQ9UPU7 963 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 STXBP5LQ9Y2K9 1186 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 EMILIN1Q9Y6C2 1016 aa6.02□□□□□ -1.45
ATXN3-242ENST00000556644 TTC28Q96AY4 2481 aa6.01□□□□□ -1.45
ATXN3-242ENST00000556644 TCERG1O14776 1098 aaKnown RBP6.01□□□□□ -1.45
ATXN3-242ENST00000556644 ZNF530Q6P9A1 599 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-242ENST00000556644 TMEM106CQ9BVX2 250 aa6.01□□□□□ -1.45
ATXN3-242ENST00000556644 BCL2L13Q9BXK5 485 aa6.01□□□□□ -1.45
ATXN3-242ENST00000556644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.01□□□□□ -1.453e-6■■□□□ 13.5
ATXN3-242ENST00000556644 CACNA1AO00555 2505 aa6.01□□□□□ -1.45
ATXN3-242ENST00000556644 NPC1L1Q9UHC9 1359 aa6.01□□□□□ -1.45
ATXN3-242ENST00000556644 SCN7AQ01118 1682 aa6.01□□□□□ -1.45
ATXN3-242ENST00000556644 SNED1Q8TER0 1413 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 WTIPA6NIX2 430 aaPredicted RBP6□□□□□ -1.45
ATXN3-242ENST00000556644 FAM177BA6PVY3 158 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 PPIP5K2O43314 1243 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 CXCL9Q07325 125 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 SLC39A6Q13433 755 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 AOC3Q16853 763 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 SLC4A8Q2Y0W8 1093 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 MOB2Q70IA6 237 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 ARMC5Q96C12 935 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 SNX27Q96L92 541 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 SETDB2Q96T68 719 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 PSMD1Q99460 953 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 TONSLQ96HA7 1378 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 SPTBN5Q9NRC6 3674 aaKnown RBP6□□□□□ -1.45
ATXN3-242ENST00000556644 VCANP13611 3396 aa6□□□□□ -1.45
ATXN3-242ENST00000556644 TMEM265A0A087WTH1 108 aa5.99□□□□□ -1.45
ATXN3-242ENST00000556644 RAD17O75943 681 aa5.99□□□□□ -1.45
ATXN3-242ENST00000556644 EGFRP00533 1210 aa5.99□□□□□ -1.45
ATXN3-242ENST00000556644 TBC1D10BQ4KMP7 808 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-242ENST00000556644 SAMD7Q7Z3H4 446 aa5.99□□□□□ -1.45
ATXN3-242ENST00000556644 NBPF5PQ86XG9 351 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-242ENST00000556644 ZC3H15Q8WU90 426 aaKnown RBP5.99□□□□□ -1.45
ATXN3-242ENST00000556644 MTMR10Q9NXD2 777 aa5.99□□□□□ -1.45
ATXN3-242ENST00000556644 PTPN22Q9Y2R2 807 aa5.99□□□□□ -1.45
ATXN3-242ENST00000556644 LAMA3Q16787 3333 aa5.99□□□□□ -1.45
ATXN3-242ENST00000556644 MRC1P22897 1456 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 CENPFP49454 3210 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 ST20-MTHFSA0A0A6YYL1 179 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 HSP90AB1P08238 724 aaKnown RBP5.98□□□□□ -1.45
ATXN3-242ENST00000556644 MTHFSP49914 203 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 RBM26Q5T8P6 1007 aaKnown RBP5.98□□□□□ -1.45
ATXN3-242ENST00000556644 MICALL2Q8IY33 904 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 REM2Q8IYK8 340 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-242ENST00000556644 CD99L2Q8TCZ2 262 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 CDCA5Q96FF9 252 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 ZNF333Q96JL9 665 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 STAP2Q9UGK3 403 aa5.98□□□□□ -1.45
ATXN3-242ENST00000556644 CNOT7Q9UIV1 285 aaKnown RBP5.98□□□□□ -1.45
ATXN3-242ENST00000556644 ZBTB12Q9Y330 459 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-242ENST00000556644 ASTN2O75129 1339 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-242ENST00000556644 ROCK2O75116 1388 aaKnown RBP5.97□□□□□ -1.45
ATXN3-242ENST00000556644 A0A087WZG4 1122 aa5.97□□□□□ -1.45
ATXN3-242ENST00000556644 FYB1O15117 783 aa5.97□□□□□ -1.45
ATXN3-242ENST00000556644 ECM2O94769 699 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-242ENST00000556644 EIF5P55010 431 aaKnown RBP5.97□□□□□ -1.45
ATXN3-242ENST00000556644 CAP1Q01518 475 aa5.97□□□□□ -1.45
ATXN3-242ENST00000556644 NOM1Q5C9Z4 860 aaKnown RBP5.97□□□□□ -1.45
ATXN3-242ENST00000556644 ANKRD13DQ6ZTN6 518 aa5.97□□□□□ -1.45
ATXN3-242ENST00000556644 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-242ENST00000556644 ZNRF3Q9ULT6 936 aa5.97□□□□□ -1.45
ATXN3-242ENST00000556644 ZNF609O15014 1411 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms