RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 DDR1Q08345 913 aa10.18□□□□□ -0.78
HNRNPC-226ENST00000556628 RALBP1Q15311 655 aa10.18□□□□□ -0.78
HNRNPC-226ENST00000556628 ANKRD13DQ6ZTN6 518 aa10.18□□□□□ -0.78
HNRNPC-226ENST00000556628 PIM2Q9P1W9 311 aa10.18□□□□□ -0.78
HNRNPC-226ENST00000556628 AFDNP55196 1824 aaKnown RBP10.18□□□□□ -0.78
HNRNPC-226ENST00000556628 DLG5Q8TDM6 1919 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 ATP10DQ9P241 1426 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 BRCA1P38398 1863 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 ARFGEF1Q9Y6D6 1849 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 SERPINB2P05120 415 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 IL6STP40189 918 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 EIF5P55010 431 aaKnown RBP10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 C1QTNF8P60827 252 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 NFIXQ14938 502 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 TAF7Q15545 349 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 BICDL1Q6ZP65 573 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 ARHGAP27Q6ZUM4 889 aa10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 GPBP1L1Q9HC44 474 aaPredicted RBP10.17□□□□□ -0.78
HNRNPC-226ENST00000556628 NPHP1O15259 732 aa10.16□□□□□ -0.78
HNRNPC-226ENST00000556628 A1BGP04217 495 aa10.16□□□□□ -0.78
HNRNPC-226ENST00000556628 SNRPA1P09661 255 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-226ENST00000556628 DDX10Q13206 875 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-226ENST00000556628 DCTN1Q14203 1278 aa10.16□□□□□ -0.78
HNRNPC-226ENST00000556628 DALRD3Q5D0E6 543 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-226ENST00000556628 PNISRQ8TF01 805 aaKnown RBP10.16□□□□□ -0.78
HNRNPC-226ENST00000556628 SCN7AQ01118 1682 aa10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 KCNQ3O43525 872 aa10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 DZIP3Q86Y13 1208 aaKnown RBP10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 ZNF526Q8TF50 670 aaPredicted RBP10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 BCL2L12Q9HB09 334 aa10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 TBC1D2BQ9UPU7 963 aa10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 USP16Q9Y5T5 823 aa10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 NRXN2Q9P2S2 1712 aa10.15□□□□□ -0.78
HNRNPC-226ENST00000556628 ADCY9O60503 1353 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 SENP3-EIF4A1A0A087X0R7 540 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 KCNA3P22001 575 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 CHRNA5P30532 468 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 LSM11P83369 360 aaKnown RBP eCLIP10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 NFE2L2Q16236 605 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 SETDB2Q96T68 719 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
HNRNPC-226ENST00000556628 MYBBP1AQ9BQG0 1328 aaKnown RBP10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 H0YIN7 160 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 NUDT7P0C024 238 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 PDE6BP35913 854 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 TBC1D9BQ66K14 1250 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 PDZRN3Q9UPQ7 1066 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 LAMB4A4D0S4 1761 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 BCORQ6W2J9 1755 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 DLEC1Q9Y238 1755 aa10.13□□□□□ -0.79
HNRNPC-226ENST00000556628 KDM3BQ7LBC6 1761 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 SLC34A2O95436 690 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 PBX2P40425 430 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 PIP4K2AP48426 406 aaPredicted RBP10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 ST5P78524 1137 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 LMOD3Q0VAK6 560 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 C2CD5Q86YS7 1000 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 TTLL6Q8N841 843 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 TMC2Q8TDI7 906 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 MIS18AQ9NYP9 233 aa10.12□□□□□ -0.79
HNRNPC-226ENST00000556628 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 CAMTA2O94983 1202 aa10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 C9orf131Q5VYM1 1079 aa10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 CLEC4GQ6UXB4 293 aa10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 CNBD1Q8NA66 436 aa10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 BRIP1Q9BX63 1249 aa10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 RYDENQ9NUL5 291 aaKnown RBP10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
HNRNPC-226ENST00000556628 UTRNP46939 3433 aa10.1□□□□□ -0.79
HNRNPC-226ENST00000556628 RIPK4P57078 832 aa10.1□□□□□ -0.79
HNRNPC-226ENST00000556628 PRR5LQ6MZQ0 368 aa10.1□□□□□ -0.79
HNRNPC-226ENST00000556628 ZNF622Q969S3 477 aaKnown RBP eCLIP10.1□□□□□ -0.791e-21■□□□□ 9
HNRNPC-226ENST00000556628 RNF181Q9P0P0 153 aa10.1□□□□□ -0.79
HNRNPC-226ENST00000556628 ANKRD31Q8N7Z5 1873 aa10.09□□□□□ -0.79
HNRNPC-226ENST00000556628 EIF4A1P60842 406 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-226ENST00000556628 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
HNRNPC-226ENST00000556628 NGEFQ8N5V2 710 aa10.09□□□□□ -0.79
HNRNPC-226ENST00000556628 THUMPD2Q9BTF0 503 aaKnown RBP10.09□□□□□ -0.79
HNRNPC-226ENST00000556628 TSPYL4Q9UJ04 414 aa10.09□□□□□ -0.79
HNRNPC-226ENST00000556628 LHX6Q9UPM6 363 aa10.09□□□□□ -0.79
HNRNPC-226ENST00000556628 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 SBF1O95248 1867 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 CACNA1SQ13698 1873 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 NBPF26B4DH59 902 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 GTF2E1P29083 439 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 NBPF10Q6P3W6 841 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 TPTE2Q6XPS3 522 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 KIF6Q6ZMV9 814 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 C16orf71Q8IYS4 520 aaPredicted RBP10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 NBPF15Q8N660 670 aa10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 NIP7Q9Y221 180 aaKnown RBP eCLIP10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 RRP7AQ9Y3A4 280 aaKnown RBP10.08□□□□□ -0.8
HNRNPC-226ENST00000556628 CCDC88AQ3V6T2 1871 aa10.07□□□□□ -0.8
HNRNPC-226ENST00000556628 MYL6BP14649 208 aa10.07□□□□□ -0.8
HNRNPC-226ENST00000556628 LMNB1P20700 586 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms