RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 HIF1AQ16665 826 aa8.14□□□□□ -1.11
PCNX1-212ENST00000556516 RAB44Q7Z6P3 723 aaPredicted RBP8.14□□□□□ -1.11
PCNX1-212ENST00000556516 NXF1Q9UBU9 619 aaKnown RBP8.14□□□□□ -1.11
PCNX1-212ENST00000556516 PCDHGC4Q9Y5F7 938 aa8.14□□□□□ -1.11
PCNX1-212ENST00000556516 PDGFAP04085 211 aa8.13□□□□□ -1.11
PCNX1-212ENST00000556516 TNP2Q05952 138 aa8.13□□□□□ -1.11
PCNX1-212ENST00000556516 GPR161Q8N6U8 529 aaKnown RBP8.13□□□□□ -1.11
PCNX1-212ENST00000556516 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
PCNX1-212ENST00000556516 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
PCNX1-212ENST00000556516 C8orf34Q49A92 452 aa8.12□□□□□ -1.11
PCNX1-212ENST00000556516 SAMD5Q5TGI4 173 aa8.12□□□□□ -1.11
PCNX1-212ENST00000556516 ALKBH2Q6NS38 261 aa8.12□□□□□ -1.11
PCNX1-212ENST00000556516 KRT25Q7Z3Z0 450 aa8.12□□□□□ -1.11
PCNX1-212ENST00000556516 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
PCNX1-212ENST00000556516 NDFIP2Q9NV92 336 aa8.12□□□□□ -1.11
PCNX1-212ENST00000556516 DCTN4Q9UJW0 460 aa8.12□□□□□ -1.11
PCNX1-212ENST00000556516 EFSO43281 561 aa8.11□□□□□ -1.11
PCNX1-212ENST00000556516 NDUFB5O43674 189 aa8.11□□□□□ -1.11
PCNX1-212ENST00000556516 FAM157BP0CG42 384 aa8.11□□□□□ -1.11
PCNX1-212ENST00000556516 LBRQ14739 615 aaKnown RBP8.11□□□□□ -1.11
PCNX1-212ENST00000556516 FIGNL1Q6PIW4 674 aa8.11□□□□□ -1.11
PCNX1-212ENST00000556516 SV2AQ7L0J3 742 aa8.11□□□□□ -1.11
PCNX1-212ENST00000556516 TMC1Q8TDI8 760 aa8.11□□□□□ -1.11
PCNX1-212ENST00000556516 KCNMB2Q9Y691 235 aa8.11□□□□□ -1.11
PCNX1-212ENST00000556516 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
PCNX1-212ENST00000556516 H3BM21 787 aa8.1□□□□□ -1.11
PCNX1-212ENST00000556516 MZF1P28698 734 aaPredicted RBP8.1□□□□□ -1.11
PCNX1-212ENST00000556516 TMC7Q7Z402 723 aa8.1□□□□□ -1.11
PCNX1-212ENST00000556516 CCDC9Q9Y3X0 531 aaKnown RBP8.1□□□□□ -1.11
PCNX1-212ENST00000556516 GPR182O15218 404 aa8.09□□□□□ -1.11
PCNX1-212ENST00000556516 FGFR3P22607 806 aa8.09□□□□□ -1.11
PCNX1-212ENST00000556516 CTBSQ01459 385 aa8.09□□□□□ -1.11
PCNX1-212ENST00000556516 GAS6Q14393 721 aa8.09□□□□□ -1.11
PCNX1-212ENST00000556516 DNAJC14Q6Y2X3 702 aaPredicted RBP8.09□□□□□ -1.11
PCNX1-212ENST00000556516 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
PCNX1-212ENST00000556516 SLC30A3Q99726 388 aa8.09□□□□□ -1.11
PCNX1-212ENST00000556516 KCNH4Q9UQ05 1017 aa8.09□□□□□ -1.11
PCNX1-212ENST00000556516 UBAP1LF5GYI3 381 aa8.08□□□□□ -1.12
PCNX1-212ENST00000556516 TERTO14746 1132 aaKnown RBP8.08□□□□□ -1.12
PCNX1-212ENST00000556516 XYLBO75191 536 aa8.08□□□□□ -1.12
PCNX1-212ENST00000556516 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
PCNX1-212ENST00000556516 NANOS1Q8WY41 292 aaKnown RBP8.08□□□□□ -1.12
PCNX1-212ENST00000556516 ATXN7L1Q9ULK2 861 aaPredicted RBP8.08□□□□□ -1.12
PCNX1-212ENST00000556516 ANKRD33BA6NCL7 494 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 SASH3O75995 380 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 EPB42P16452 691 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 GJD3Q8N144 294 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 TRERF1Q96PN7 1200 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 MARK1Q9P0L2 795 aa8.07□□□□□ -1.12
PCNX1-212ENST00000556516 C2CD2LO14523 706 aa8.06□□□□□ -1.12
PCNX1-212ENST00000556516 TARSP26639 723 aaKnown RBP8.06□□□□□ -1.12
PCNX1-212ENST00000556516 SPEM2Q0P670 501 aa8.06□□□□□ -1.12
PCNX1-212ENST00000556516 FOXR1Q6PIV2 292 aa8.06□□□□□ -1.12
PCNX1-212ENST00000556516 BHMTQ93088 406 aa8.06□□□□□ -1.12
PCNX1-212ENST00000556516 GMCL1Q96IK5 515 aa8.06□□□□□ -1.12
PCNX1-212ENST00000556516 RBCK1Q9BYM8 510 aa8.06□□□□□ -1.12
PCNX1-212ENST00000556516 TMEM63CQ9P1W3 806 aa8.06□□□□□ -1.12
PCNX1-212ENST00000556516 FOXD3Q9UJU5 478 aaPredicted RBP8.06□□□□□ -1.12
PCNX1-212ENST00000556516 IGHA2P01877 340 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 NFKB1P19838 968 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 ORC1Q13415 861 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 ASB16Q96NS5 453 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 FAM129BQ96TA1 746 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 GSX2Q9BZM3 304 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 FAM13BQ9NYF5 915 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 ZFATQ9P243 1243 aa8.05□□□□□ -1.12
PCNX1-212ENST00000556516 PCSK2P16519 638 aa8.04□□□□□ -1.12
PCNX1-212ENST00000556516 KCNQ4P56696 695 aa8.04□□□□□ -1.12
PCNX1-212ENST00000556516 KRT76Q01546 638 aa8.04□□□□□ -1.12
PCNX1-212ENST00000556516 ZNF438Q7Z4V0 828 aa8.04□□□□□ -1.12
PCNX1-212ENST00000556516 RGS22Q8NE09 1264 aa8.04□□□□□ -1.12
PCNX1-212ENST00000556516 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
PCNX1-212ENST00000556516 COL25A1Q9BXS0 654 aaPredicted RBP8.04□□□□□ -1.12
PCNX1-212ENST00000556516 PHF24Q9UPV7 400 aa8.04□□□□□ -1.12
PCNX1-212ENST00000556516 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.04□□□□□ -1.12
PCNX1-212ENST00000556516 BMP4P12644 408 aa8.03□□□□□ -1.12
PCNX1-212ENST00000556516 MX2P20592 715 aa8.03□□□□□ -1.12
PCNX1-212ENST00000556516 TAGLNQ01995 201 aaKnown RBP8.03□□□□□ -1.12
PCNX1-212ENST00000556516 NFX1Q12986 1120 aaKnown RBP8.03□□□□□ -1.12
PCNX1-212ENST00000556516 CCINQ13939 588 aa8.03□□□□□ -1.12
PCNX1-212ENST00000556516 NPAS4Q8IUM7 802 aa8.03□□□□□ -1.12
PCNX1-212ENST00000556516 ZSCAN29Q8IWY8 852 aaPredicted RBP8.03□□□□□ -1.12
PCNX1-212ENST00000556516 TTC16Q8NEE8 873 aa8.03□□□□□ -1.12
PCNX1-212ENST00000556516 CFHR5Q9BXR6 569 aa8.03□□□□□ -1.12
PCNX1-212ENST00000556516 ELP3Q9H9T3 547 aa8.03□□□□□ -1.12
PCNX1-212ENST00000556516 CYP2E1P05181 493 aaPredicted RBP8.02□□□□□ -1.13
PCNX1-212ENST00000556516 P4HBP07237 508 aaKnown RBP8.02□□□□□ -1.13
PCNX1-212ENST00000556516 RARAP10276 462 aa8.02□□□□□ -1.13
PCNX1-212ENST00000556516 MAPK8P45983 427 aa8.02□□□□□ -1.13
PCNX1-212ENST00000556516 PCBP4P57723 403 aaKnown RBP8.02□□□□□ -1.13
PCNX1-212ENST00000556516 TBC1D8BQ0IIM8 1120 aa8.02□□□□□ -1.13
PCNX1-212ENST00000556516 ZNF775Q96BV0 537 aaPredicted RBP8.02□□□□□ -1.13
PCNX1-212ENST00000556516 PNMA5Q96PV4 448 aa8.02□□□□□ -1.13
PCNX1-212ENST00000556516 IGFLR1Q9H665 355 aa8.02□□□□□ -1.13
PCNX1-212ENST00000556516 CNTN3Q9P232 1028 aa8.02□□□□□ -1.13
PCNX1-212ENST00000556516 TREHO43280 583 aa8.01□□□□□ -1.13
PCNX1-212ENST00000556516 MMP20O60882 483 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms