RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 C8orf58Q8NAV2 365 aa14.92□□□□□ -0.02
SLIRP-205ENST00000556310 NYXQ9GZU5 481 aa14.92□□□□□ -0.02
SLIRP-205ENST00000556310 ADCY9O60503 1353 aa14.91□□□□□ -0.02
SLIRP-205ENST00000556310 ABCC12Q96J65 1359 aa14.91□□□□□ -0.02
SLIRP-205ENST00000556310 GPTP24298 496 aa14.91□□□□□ -0.02
SLIRP-205ENST00000556310 AIMP1Q12904 312 aaKnown RBP14.91□□□□□ -0.02
SLIRP-205ENST00000556310 CHMP4AQ9BY43 222 aa14.91□□□□□ -0.02
SLIRP-205ENST00000556310 HYPKQ9NX55 129 aa14.91□□□□□ -0.02
SLIRP-205ENST00000556310 SALL2Q9Y467 1007 aaPredicted RBP14.91□□□□□ -0.02
SLIRP-205ENST00000556310 CACNA1FO60840 1977 aa14.91□□□□□ -0.02
SLIRP-205ENST00000556310 FANCIQ9NVI1 1328 aa14.91□□□□□ -0.02
SLIRP-205ENST00000556310 FAM177BA6PVY3 158 aa14.9□□□□□ -0.02
SLIRP-205ENST00000556310 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
SLIRP-205ENST00000556310 PARP10Q53GL7 1025 aa14.9□□□□□ -0.02
SLIRP-205ENST00000556310 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
SLIRP-205ENST00000556310 TTLL6Q8N841 843 aa14.9□□□□□ -0.02
SLIRP-205ENST00000556310 SBF1O95248 1867 aa14.9□□□□□ -0.02
SLIRP-205ENST00000556310 SLX4Q8IY92 1834 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 KLRG2A4D1S0 409 aaPredicted RBP14.89□□□□□ -0.03
SLIRP-205ENST00000556310 SRGNP10124 158 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 GTF2E1P29083 439 aaPredicted RBP14.89□□□□□ -0.03
SLIRP-205ENST00000556310 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 STYK1Q6J9G0 422 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 TSPYL6Q8N831 410 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 PLBD2Q8NHP8 589 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 RNF123Q5XPI4 1314 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 FER1L6Q2WGJ9 1857 aa14.89□□□□□ -0.03
SLIRP-205ENST00000556310 LAMB2P55268 1798 aa14.88□□□□□ -0.03
SLIRP-205ENST00000556310 NTSR2O95665 410 aa14.88□□□□□ -0.03
SLIRP-205ENST00000556310 SUSD4Q5VX71 490 aa14.88□□□□□ -0.03
SLIRP-205ENST00000556310 ARHGAP27Q6ZUM4 889 aa14.88□□□□□ -0.03
SLIRP-205ENST00000556310 PPP1R42Q7Z4L9 355 aa14.88□□□□□ -0.03
SLIRP-205ENST00000556310 ZNF784Q8NCA9 323 aaPredicted RBP14.88□□□□□ -0.03
SLIRP-205ENST00000556310 ZNF622Q969S3 477 aaKnown RBP eCLIP14.88□□□□□ -0.03
SLIRP-205ENST00000556310 ZNF521Q96K83 1311 aa14.88□□□□□ -0.03
SLIRP-205ENST00000556310 TWISTNBQ3B726 338 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-205ENST00000556310 ANKRD13DQ6ZTN6 518 aa14.87□□□□□ -0.03
SLIRP-205ENST00000556310 NUTM1Q86Y26 1132 aa14.87□□□□□ -0.03
SLIRP-205ENST00000556310 SPOCK2Q92563 424 aa14.87□□□□□ -0.03
SLIRP-205ENST00000556310 CNKSR1Q969H4 720 aa14.87□□□□□ -0.03
SLIRP-205ENST00000556310 MASTLQ96GX5 879 aa14.87□□□□□ -0.03
SLIRP-205ENST00000556310 NPR1P16066 1061 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 GOLGA2Q08379 1002 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 TCIRG1Q13488 830 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 ERFEQ4G0M1 354 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 NLRP10Q86W26 655 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 TIAM2Q8IVF5 1701 aa14.86□□□□□ -0.03
SLIRP-205ENST00000556310 DDX60Q8IY21 1712 aaKnown RBP14.86□□□□□ -0.03
SLIRP-205ENST00000556310 CRY2Q49AN0 593 aa14.85□□□□□ -0.03
SLIRP-205ENST00000556310 DIEXFQ68CQ4 756 aaKnown RBP14.85□□□□□ -0.03
SLIRP-205ENST00000556310 PRPF40BQ6NWY9 871 aaKnown RBP14.85□□□□□ -0.03
SLIRP-205ENST00000556310 UTP14AQ9BVJ6 771 aaKnown RBP14.85□□□□□ -0.03
SLIRP-205ENST00000556310 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
SLIRP-205ENST00000556310 PHAXQ9H814 394 aaKnown RBP14.85□□□□□ -0.03
SLIRP-205ENST00000556310 ZBTB47Q9UFB7 747 aaPredicted RBP14.85□□□□□ -0.03
SLIRP-205ENST00000556310 ISCA1Q9BUE6 129 aa14.84□□□□□ -0.03
SLIRP-205ENST00000556310 DICER1Q9UPY3 1922 aaKnown RBP14.84□□□□□ -0.03
SLIRP-205ENST00000556310 DDX58O95786 925 aaKnown RBP14.83□□□□□ -0.04
SLIRP-205ENST00000556310 RASSF7Q02833 373 aa14.82□□□□□ -0.04
SLIRP-205ENST00000556310 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
SLIRP-205ENST00000556310 SOGA3Q5TF21 947 aa14.82□□□□□ -0.04
SLIRP-205ENST00000556310 RIC3Q7Z5B4 369 aa14.82□□□□□ -0.04
SLIRP-205ENST00000556310 TRMT112Q9UI30 125 aaKnown RBP14.82□□□□□ -0.04
SLIRP-205ENST00000556310 SH3TC1Q8TE82 1336 aa14.82□□□□□ -0.04
SLIRP-205ENST00000556310 NFKBIEO00221 500 aa14.81□□□□□ -0.04
SLIRP-205ENST00000556310 C21orf2O43822 256 aa14.81□□□□□ -0.04
SLIRP-205ENST00000556310 ALDH1B1P30837 517 aa14.81□□□□□ -0.04
SLIRP-205ENST00000556310 HOXA10P31260 410 aaPredicted RBP14.81□□□□□ -0.04
SLIRP-205ENST00000556310 TRIM28Q13263 835 aaKnown RBP14.81□□□□□ -0.04
SLIRP-205ENST00000556310 SLC10A5Q5PT55 438 aa14.81□□□□□ -0.04
SLIRP-205ENST00000556310 C9orf131Q5VYM1 1079 aa14.81□□□□□ -0.04
SLIRP-205ENST00000556310 RPGRQ92834 1020 aaKnown RBP14.81□□□□□ -0.04
SLIRP-205ENST00000556310 CREBZFQ9NS37 354 aa14.81□□□□□ -0.04
SLIRP-205ENST00000556310 ATP5J2-PTCD1G3V325 749 aa14.8□□□□□ -0.04
SLIRP-205ENST00000556310 TCERG1O14776 1098 aaKnown RBP14.8□□□□□ -0.04
SLIRP-205ENST00000556310 VAMP4O75379 141 aa14.8□□□□□ -0.04
SLIRP-205ENST00000556310 NLRP3Q96P20 1036 aa14.8□□□□□ -0.04
SLIRP-205ENST00000556310 RNF181Q9P0P0 153 aa14.8□□□□□ -0.04
SLIRP-205ENST00000556310 LTBP3Q9NS15 1303 aa14.8□□□□□ -0.04
SLIRP-205ENST00000556310 LMNB1P20700 586 aa14.79□□□□□ -0.04
SLIRP-205ENST00000556310 CCDC93Q567U6 631 aa14.79□□□□□ -0.04
SLIRP-205ENST00000556310 C3orf67Q6ZVT6 689 aa14.79□□□□□ -0.04
SLIRP-205ENST00000556310 C7orf43Q8WVR3 580 aa14.79□□□□□ -0.04
SLIRP-205ENST00000556310 METTL22Q9BUU2 404 aaPredicted RBP14.79□□□□□ -0.04
SLIRP-205ENST00000556310 ZC3H4Q9UPT8 1303 aaKnown RBP14.79□□□□□ -0.04
SLIRP-205ENST00000556310 SNED1Q8TER0 1413 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 E9PSI1 815 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 KSR2Q6VAB6 950 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 RBM17Q96I25 401 aaKnown RBP14.78□□□□□ -0.04
SLIRP-205ENST00000556310 CRAMP1Q96RY5 1269 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 MYD88Q99836 296 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 TAOK3Q9H2K8 898 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 MAP3K2Q9Y2U5 619 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 MYH3P11055 1940 aa14.78□□□□□ -0.04
SLIRP-205ENST00000556310 PI4KAP2A4QPH2 592 aa14.77□□□□□ -0.05
SLIRP-205ENST00000556310 HCLS1P14317 486 aaPredicted RBP14.77□□□□□ -0.05
SLIRP-205ENST00000556310 PRELPP51888 382 aa14.77□□□□□ -0.05
SLIRP-205ENST00000556310 FLIIQ13045 1269 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms