RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 SPON1Q9HCB6 807 aa14.55□□□□□ -0.08
GABRB3-210ENST00000556166 ALDH1L1O75891 902 aa14.54□□□□□ -0.08
GABRB3-210ENST00000556166 NBPF5PQ86XG9 351 aaPredicted RBP14.54□□□□□ -0.08
GABRB3-210ENST00000556166 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
GABRB3-210ENST00000556166 UTP14AQ9BVJ6 771 aaKnown RBP14.54□□□□□ -0.08
GABRB3-210ENST00000556166 CWC25Q9NXE8 425 aaPredicted RBP14.54□□□□□ -0.08
GABRB3-210ENST00000556166 PARP3Q9Y6F1 533 aa14.54□□□□□ -0.08
GABRB3-210ENST00000556166 NUP98P52948 1817 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 CARMIL3Q8ND23 1372 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 ARFGEF2Q9Y6D5 1785 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 H7C1W4 665 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 CASP7P55210 303 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 ERFEQ4G0M1 354 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 RTL5Q5HYW3 569 aaPredicted RBP14.53□□□□□ -0.08
GABRB3-210ENST00000556166 PRR5LQ6MZQ0 368 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 FAM89AQ96GI7 184 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 USP44Q9H0E7 712 aa14.53□□□□□ -0.08
GABRB3-210ENST00000556166 CCT4P50991 539 aaKnown RBP14.52□□□□□ -0.08
GABRB3-210ENST00000556166 TPTE2Q6XPS3 522 aa14.52□□□□□ -0.08
GABRB3-210ENST00000556166 ZBTB38Q8NAP3 1195 aaPredicted RBP14.52□□□□□ -0.08
GABRB3-210ENST00000556166 TRMT112Q9UI30 125 aaKnown RBP14.52□□□□□ -0.08
GABRB3-210ENST00000556166 POLD1P28340 1107 aa14.51□□□□□ -0.09
GABRB3-210ENST00000556166 PPP1R42Q7Z4L9 355 aa14.51□□□□□ -0.09
GABRB3-210ENST00000556166 SRCAPQ6ZRS2 3230 aa14.51□□□□□ -0.09
GABRB3-210ENST00000556166 PCCAP05165 728 aaPredicted RBP14.51□□□□□ -0.09
GABRB3-210ENST00000556166 NBPF7P0C2Y1 421 aaPredicted RBP14.51□□□□□ -0.09
GABRB3-210ENST00000556166 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
GABRB3-210ENST00000556166 PDE3AQ14432 1141 aa14.51□□□□□ -0.09
GABRB3-210ENST00000556166 SLC10A5Q5PT55 438 aa14.51□□□□□ -0.09
GABRB3-210ENST00000556166 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
GABRB3-210ENST00000556166 FTSJ3Q8IY81 847 aaKnown RBP14.51□□□□□ -0.09
GABRB3-210ENST00000556166 CNBD1Q8NA66 436 aa14.51□□□□□ -0.09
GABRB3-210ENST00000556166 COL24A1Q17RW2 1714 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 ABCC12Q96J65 1359 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 PXDNLA1KZ92 1463 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 GRM8O00222 908 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 UBE3BQ7Z3V4 1068 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.5□□□□□ -0.09
GABRB3-210ENST00000556166 NYXQ9GZU5 481 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 COG6Q9Y2V7 657 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 UTYO14607 1347 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 SH3TC1Q8TE82 1336 aa14.5□□□□□ -0.09
GABRB3-210ENST00000556166 IBTKQ9P2D0 1353 aaPredicted RBP14.5□□□□□ -0.09
GABRB3-210ENST00000556166 ZBTB7BO15156 539 aaPredicted RBP14.49□□□□□ -0.09
GABRB3-210ENST00000556166 KAZALD1Q96I82 304 aa14.49□□□□□ -0.09
GABRB3-210ENST00000556166 MEIS3Q99687 375 aa14.49□□□□□ -0.09
GABRB3-210ENST00000556166 IRS4O14654 1257 aaPredicted RBP14.48□□□□□ -0.09
GABRB3-210ENST00000556166 ITPRIPQ8IWB1 547 aa14.48□□□□□ -0.09
GABRB3-210ENST00000556166 C9orf78Q9NZ63 289 aaPredicted RBP14.48□□□□□ -0.09
GABRB3-210ENST00000556166 MS4A1P11836 297 aa14.47□□□□□ -0.09
GABRB3-210ENST00000556166 GTF2E1P29083 439 aaPredicted RBP14.47□□□□□ -0.09
GABRB3-210ENST00000556166 EPHA10Q5JZY3 1008 aa14.47□□□□□ -0.09
GABRB3-210ENST00000556166 BRIP1Q9BX63 1249 aa14.47□□□□□ -0.09
GABRB3-210ENST00000556166 KLRG2A4D1S0 409 aaPredicted RBP14.47□□□□□ -0.09
GABRB3-210ENST00000556166 MVPQ14764 893 aaKnown RBP14.47□□□□□ -0.09
GABRB3-210ENST00000556166 SUCLG2Q96I99 432 aa14.47□□□□□ -0.09
GABRB3-210ENST00000556166 NPHP1O15259 732 aa14.46□□□□□ -0.09
GABRB3-210ENST00000556166 ST5P78524 1137 aa14.46□□□□□ -0.09
GABRB3-210ENST00000556166 FOXO4P98177 505 aa14.46□□□□□ -0.09
GABRB3-210ENST00000556166 CDHR2Q9BYE9 1310 aa14.46□□□□□ -0.09
GABRB3-210ENST00000556166 C10orf71Q711Q0 1435 aa14.46□□□□□ -0.1
GABRB3-210ENST00000556166 NRXN2Q9P2S2 1712 aa14.46□□□□□ -0.1
GABRB3-210ENST00000556166 ANKRD36CQ5JPF3 1778 aa14.46□□□□□ -0.1
GABRB3-210ENST00000556166 CRBNQ96SW2 442 aa14.45□□□□□ -0.1
GABRB3-210ENST00000556166 PLA2G12BQ9BX93 195 aa14.45□□□□□ -0.1
GABRB3-210ENST00000556166 AFDNP55196 1824 aaKnown RBP14.44□□□□□ -0.1
GABRB3-210ENST00000556166 KCNA3P22001 575 aa14.44□□□□□ -0.1
GABRB3-210ENST00000556166 CHRNA5P30532 468 aa14.44□□□□□ -0.1
GABRB3-210ENST00000556166 IRX6P78412 446 aaPredicted RBP14.44□□□□□ -0.1
GABRB3-210ENST00000556166 FHDC1Q9C0D6 1143 aaPredicted RBP14.44□□□□□ -0.1
GABRB3-210ENST00000556166 PPP1R1BQ9UD71 204 aaPredicted RBP14.44□□□□□ -0.1
GABRB3-210ENST00000556166 CD2APQ9Y5K6 639 aa14.44□□□□□ -0.1
GABRB3-210ENST00000556166 A0A0G2JLW4 131 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 PDE8AO60658 829 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 UBTFL1P0CB47 393 aaPredicted RBP14.43□□□□□ -0.1
GABRB3-210ENST00000556166 CRY2Q49AN0 593 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 ANKRD44Q8N8A2 993 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 NLGN2Q8NFZ4 835 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 TTLL11Q8NHH1 800 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 ZBTB40Q9NUA8 1239 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 CSF1RP07333 972 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 GNAI3P08754 354 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 DPEP1P16444 411 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 SF3B3Q15393 1217 aaKnown RBP14.43□□□□□ -0.1
GABRB3-210ENST00000556166 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 NLRP3Q96P20 1036 aa14.43□□□□□ -0.1
GABRB3-210ENST00000556166 CCDC85AQ96PX6 553 aaPredicted RBP14.43□□□□□ -0.1
GABRB3-210ENST00000556166 BICC1Q9H694 974 aaKnown RBP14.43□□□□□ -0.1
GABRB3-210ENST00000556166 LRRFIP2Q9Y608 721 aaKnown RBP14.43□□□□□ -0.1
GABRB3-210ENST00000556166 SRGNP10124 158 aa14.42□□□□□ -0.1
GABRB3-210ENST00000556166 PDE6BP35913 854 aa14.42□□□□□ -0.1
GABRB3-210ENST00000556166 CTSWP56202 376 aa14.42□□□□□ -0.1
GABRB3-210ENST00000556166 LMBR1LQ6UX01 489 aa14.42□□□□□ -0.1
GABRB3-210ENST00000556166 C2CD5Q86YS7 1000 aa14.42□□□□□ -0.1
GABRB3-210ENST00000556166 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
GABRB3-210ENST00000556166 DDX19BQ9UMR2 479 aa14.42□□□□□ -0.1
GABRB3-210ENST00000556166 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
GABRB3-210ENST00000556166 TGFB2P61812 414 aa14.41□□□□□ -0.1
GABRB3-210ENST00000556166 EXOC6Q8TAG9 804 aa14.41□□□□□ -0.1
GABRB3-210ENST00000556166 SYT17Q9BSW7 474 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms