RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 PPP1R1BQ9UD71 204 aaPredicted RBP5.07□□□□□ -1.6
LINC00648-202ENST00000555985 ABCC12Q96J65 1359 aa5.07□□□□□ -1.6
LINC00648-202ENST00000555985 NEUROD2Q15784 382 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 GIGYF2Q6Y7W6 1299 aaKnown RBP5.06□□□□□ -1.6
LINC00648-202ENST00000555985 PIP4P2Q8N4L2 257 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 ISCA1Q9BUE6 129 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 CHPF2Q9P2E5 772 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 PARP3Q9Y6F1 533 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 DUOX1Q9NRD9 1551 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 RNF123Q5XPI4 1314 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 CCDC88AQ3V6T2 1871 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 VAMP4O75379 141 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 DPEP1P16444 411 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 TRIM28Q13263 835 aaKnown RBP5.06□□□□□ -1.6
LINC00648-202ENST00000555985 SLC10A5Q5PT55 438 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 C7orf43Q8WVR3 580 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 BRIP1Q9BX63 1249 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 TSR2Q969E8 191 aaKnown RBP5.06□□□□□ -1.6
LINC00648-202ENST00000555985 DBF4Q9UBU7 674 aaPredicted RBP5.06□□□□□ -1.6
LINC00648-202ENST00000555985 PDZRN3Q9UPQ7 1066 aa5.06□□□□□ -1.6
LINC00648-202ENST00000555985 TAF1P21675 1872 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 PRELPP51888 382 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 SLFN5Q08AF3 891 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 PLBD2Q8NHP8 589 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 WDR90Q96KV7 1748 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 HYPKQ9NX55 129 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 PODXL2Q9NZ53 605 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 COL4A5P29400 1685 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 A0A0G2JLW4 131 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 PITPNM1O00562 1244 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 SRGNP10124 158 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 HOXA10P31260 410 aaPredicted RBP5.05□□□□□ -1.6
LINC00648-202ENST00000555985 SUSD4Q5VX71 490 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 STYK1Q6J9G0 422 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 COPS6Q7L5N1 327 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 XAGE3Q8WTP9 111 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 ADAMTSL1Q8N6G6 1762 aa5.05□□□□□ -1.6
LINC00648-202ENST00000555985 EIF5BO60841 1220 aaKnown RBP5.04□□□□□ -1.6
LINC00648-202ENST00000555985 ANXA1P04083 346 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 BRPF1P55201 1214 aaPredicted RBP5.04□□□□□ -1.6
LINC00648-202ENST00000555985 TCIRG1Q13488 830 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 HDGFL1Q5TGJ6 251 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 NLRP10Q86W26 655 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 IL27Q8NEV9 243 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.04□□□□□ -1.6
LINC00648-202ENST00000555985 ZNF652Q9Y2D9 606 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 PSME4Q14997 1843 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 LTBP3Q9NS15 1303 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 MYL6BP14649 208 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 CHRNA5P30532 468 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 C3orf67Q6ZVT6 689 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 SETDB2Q96T68 719 aa5.04□□□□□ -1.6
LINC00648-202ENST00000555985 PHAXQ9H814 394 aaKnown RBP5.04□□□□□ -1.6
LINC00648-202ENST00000555985 GRIN3BO60391 1043 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 EIF2S2P20042 333 aaKnown RBP5.03□□□□□ -1.6
LINC00648-202ENST00000555985 CASP7P55210 303 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 TWISTNBQ3B726 338 aaPredicted RBP5.03□□□□□ -1.6
LINC00648-202ENST00000555985 ERFEQ4G0M1 354 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 PARP10Q53GL7 1025 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 KIF6Q6ZMV9 814 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 FAM9BQ8IZU0 186 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 KLHL34Q8N239 644 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 FBXO3Q9UK99 471 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 NIP7Q9Y221 180 aaKnown RBP eCLIP5.03□□□□□ -1.6
LINC00648-202ENST00000555985 SPEF2Q9C093 1822 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 IGKV5-2P06315 115 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 PDE6BP35913 854 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 EXOSC9Q06265 439 aaKnown RBP5.03□□□□□ -1.6
LINC00648-202ENST00000555985 CCDC30Q5VVM6 783 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 ANKRD13DQ6ZTN6 518 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 G2E3Q7L622 706 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 CNBD1Q8NA66 436 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 ZBTB3Q9H5J0 574 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 PIM2Q9P1W9 311 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 RTL9Q8NET4 1388 aa5.03□□□□□ -1.6
LINC00648-202ENST00000555985 E9PSI1 815 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 NBR1Q14596 966 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 HSP90AB3PQ58FF7 597 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 METTL22Q9BUU2 404 aaPredicted RBP5.02□□□□□ -1.61
LINC00648-202ENST00000555985 NYXQ9GZU5 481 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 NOP58Q9Y2X3 529 aaKnown RBP5.02□□□□□ -1.61
LINC00648-202ENST00000555985 LAS1LQ9Y4W2 734 aaKnown RBP5.02□□□□□ -1.61
LINC00648-202ENST00000555985 NFKBIEO00221 500 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 DALRD3Q5D0E6 543 aaKnown RBP5.02□□□□□ -1.61
LINC00648-202ENST00000555985 TPTE2Q6XPS3 522 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 C2CD5Q86YS7 1000 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 MASTLQ96GX5 879 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 MYH16Q9H6N6 1097 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 CDHR2Q9BYE9 1310 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 NPR1P16066 1061 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 ST5P78524 1137 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 GOLGA2Q08379 1002 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 SF3B3Q15393 1217 aaKnown RBP5.02□□□□□ -1.61
LINC00648-202ENST00000555985 KSR2Q6VAB6 950 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 BICDL1Q6ZP65 573 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 NBPF5PQ86XG9 351 aaPredicted RBP5.02□□□□□ -1.61
LINC00648-202ENST00000555985 NECTIN2Q92692 538 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 PKNOX2Q96KN3 472 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 CRAMP1Q96RY5 1269 aa5.02□□□□□ -1.61
LINC00648-202ENST00000555985 CHMP4AQ9BY43 222 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms