RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
SCFD1-217ENST00000555953 BTLAQ7Z6A9 289 aa9.06□□□□□ -0.96
SCFD1-217ENST00000555953 HINFPQ9BQA5 517 aa9.06□□□□□ -0.96
SCFD1-217ENST00000555953 FAM196BA6NMK8 535 aa9.05□□□□□ -0.96
SCFD1-217ENST00000555953 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-217ENST00000555953 M0R082 166 aa9.05□□□□□ -0.96
SCFD1-217ENST00000555953 ALBP02768 609 aa9.05□□□□□ -0.96
SCFD1-217ENST00000555953 FURINP09958 794 aa9.05□□□□□ -0.96
SCFD1-217ENST00000555953 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-217ENST00000555953 NEUROD1Q13562 356 aa9.05□□□□□ -0.96
SCFD1-217ENST00000555953 COL9A3Q14050 684 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-217ENST00000555953 ANKMY2Q8IV38 441 aa9.05□□□□□ -0.96
SCFD1-217ENST00000555953 ZNF417Q8TAU3 575 aa9.05□□□□□ -0.96
SCFD1-217ENST00000555953 ZNF587Q96SQ5 575 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-217ENST00000555953 C8orf86Q6ZUL3 223 aa9.04□□□□□ -0.96
SCFD1-217ENST00000555953 BHMTQ93088 406 aa9.04□□□□□ -0.96
SCFD1-217ENST00000555953 VRTNQ9H8Y1 702 aa9.04□□□□□ -0.96
SCFD1-217ENST00000555953 SPATA31C1P0DKV0 1188 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 IGFBP4P22692 258 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 HIF1AQ16665 826 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 RTN1Q16799 776 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 MICALL1Q8N3F8 863 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 ARXQ96QS3 562 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 PRDM6Q9NQX0 595 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 BCS1LQ9Y276 419 aa9.03□□□□□ -0.96
SCFD1-217ENST00000555953 IER5Q5VY09 327 aa9.02□□□□□ -0.97
SCFD1-217ENST00000555953 CFAP70Q5T0N1 1121 aa9.01□□□□□ -0.97
SCFD1-217ENST00000555953 C20orf204Q6ZNR8 217 aa9.01□□□□□ -0.97
SCFD1-217ENST00000555953 DMGDHQ9UI17 866 aaKnown RBP9.01□□□□□ -0.97
SCFD1-217ENST00000555953 SPDYE3A6NKU9 549 aa9□□□□□ -0.97
SCFD1-217ENST00000555953 FAM229AH3BQW9 127 aa9□□□□□ -0.97
SCFD1-217ENST00000555953 TGFBR3LH3BV60 316 aa9□□□□□ -0.97
SCFD1-217ENST00000555953 NID1P14543 1247 aa8.99□□□□□ -0.97
SCFD1-217ENST00000555953 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
SCFD1-217ENST00000555953 TBC1D8BQ0IIM8 1120 aa8.99□□□□□ -0.97
SCFD1-217ENST00000555953 PRRT3Q5FWE3 981 aa8.99□□□□□ -0.97
SCFD1-217ENST00000555953 UBE2OQ9C0C9 1292 aaKnown RBP8.99□□□□□ -0.97
SCFD1-217ENST00000555953 KLK14Q9P0G3 267 aa8.99□□□□□ -0.97
SCFD1-217ENST00000555953 ZNF777Q9ULD5 760 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-217ENST00000555953 WEE1P30291 646 aa8.98□□□□□ -0.97
SCFD1-217ENST00000555953 GSX2Q9BZM3 304 aa8.98□□□□□ -0.97
SCFD1-217ENST00000555953 IGFLR1Q9H665 355 aa8.98□□□□□ -0.97
SCFD1-217ENST00000555953 SLC6A14Q9UN76 642 aa8.98□□□□□ -0.97
SCFD1-217ENST00000555953 DOC2BQ14184 412 aa8.97□□□□□ -0.97
SCFD1-217ENST00000555953 QTRT2Q9H974 415 aaKnown RBP8.97□□□□□ -0.97
SCFD1-217ENST00000555953 GATA4P43694 442 aa8.96□□□□□ -0.98
SCFD1-217ENST00000555953 DGKZQ13574 1117 aa8.96□□□□□ -0.98
SCFD1-217ENST00000555953 CCINQ13939 588 aa8.96□□□□□ -0.98
SCFD1-217ENST00000555953 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
SCFD1-217ENST00000555953 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-217ENST00000555953 FOXO3O43524 673 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 LILRB5O75023 590 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 NFKB1P19838 968 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 INPP5BP32019 993 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 IDH3AP50213 366 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 PNMA5Q96PV4 448 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 EFCC1Q9HA90 598 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 DNAJB12Q9NXW2 375 aaKnown RBP8.95□□□□□ -0.98
SCFD1-217ENST00000555953 NAGPAQ9UK23 515 aa8.95□□□□□ -0.98
SCFD1-217ENST00000555953 APBA3O96018 575 aa8.94□□□□□ -0.98
SCFD1-217ENST00000555953 ITGB7P26010 798 aa8.94□□□□□ -0.98
SCFD1-217ENST00000555953 TRIM28Q13263 835 aaKnown RBP8.94□□□□□ -0.98
SCFD1-217ENST00000555953 FAM200AQ8TCP9 573 aa8.94□□□□□ -0.98
SCFD1-217ENST00000555953 NUDT8Q8WV74 236 aa8.93□□□□□ -0.98
SCFD1-217ENST00000555953 JPH1Q9HDC5 661 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-217ENST00000555953 EPB42P16452 691 aa8.92□□□□□ -0.98
SCFD1-217ENST00000555953 RFX1P22670 979 aa8.92□□□□□ -0.98
SCFD1-217ENST00000555953 GRIK4Q16099 956 aa8.92□□□□□ -0.98
SCFD1-217ENST00000555953 TRAPPC3LQ5T215 181 aa8.92□□□□□ -0.98
SCFD1-217ENST00000555953 VTI1AQ96AJ9 217 aa8.92□□□□□ -0.98
SCFD1-217ENST00000555953 MYO19Q96H55 970 aa8.92□□□□□ -0.98
SCFD1-217ENST00000555953 MICAL2O94851 1124 aa8.91□□□□□ -0.98
SCFD1-217ENST00000555953 ARSDP51689 593 aa8.91□□□□□ -0.98
SCFD1-217ENST00000555953 XP32Q5T750 250 aa8.91□□□□□ -0.98
SCFD1-217ENST00000555953 PSAPL1Q6NUJ1 521 aa8.91□□□□□ -0.98
SCFD1-217ENST00000555953 SEMA6BQ9H3T3 888 aa8.91□□□□□ -0.98
SCFD1-217ENST00000555953 ZFATQ9P243 1243 aa8.91□□□□□ -0.98
SCFD1-217ENST00000555953 NOVA2Q9UNW9 492 aaKnown RBP8.91□□□□□ -0.98
SCFD1-217ENST00000555953 AFF1P51825 1210 aaKnown RBP8.9□□□□□ -0.98
SCFD1-217ENST00000555953 C11orf91Q3C1V1 193 aa8.9□□□□□ -0.98
SCFD1-217ENST00000555953 KRT25Q7Z3Z0 450 aa8.9□□□□□ -0.98
SCFD1-217ENST00000555953 TPSG1Q9NRR2 321 aa8.9□□□□□ -0.98
SCFD1-217ENST00000555953 LRFN2Q9ULH4 789 aa8.9□□□□□ -0.98
SCFD1-217ENST00000555953 A0A0A0MRY4 1105 aa8.89□□□□□ -0.99
SCFD1-217ENST00000555953 MAP3K6O95382 1288 aa8.89□□□□□ -0.99
SCFD1-217ENST00000555953 FKBP5Q13451 457 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-217ENST00000555953 RSPO4Q2I0M5 234 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-217ENST00000555953 NACC1Q96RE7 527 aa8.89□□□□□ -0.99
SCFD1-217ENST00000555953 OPLAHO14841 1288 aa8.88□□□□□ -0.99
SCFD1-217ENST00000555953 TARSP26639 723 aaKnown RBP8.88□□□□□ -0.99
SCFD1-217ENST00000555953 FAM35AQ86V20 835 aa8.88□□□□□ -0.99
SCFD1-217ENST00000555953 IFT43Q96FT9 208 aa8.88□□□□□ -0.99
SCFD1-217ENST00000555953 PRIMPOLQ96LW4 560 aa8.88□□□□□ -0.99
SCFD1-217ENST00000555953 ZMIZ1Q9ULJ6 1067 aa8.88□□□□□ -0.99
SCFD1-217ENST00000555953 USP20Q9Y2K6 914 aa8.88□□□□□ -0.99
SCFD1-217ENST00000555953 ZBTB42B2RXF5 422 aa8.87□□□□□ -0.99
SCFD1-217ENST00000555953 RGS9O75916 674 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-217ENST00000555953 SASH3O75995 380 aa8.87□□□□□ -0.99
SCFD1-217ENST00000555953 CPB1P15086 417 aa8.87□□□□□ -0.99
SCFD1-217ENST00000555953 ELNP15502 786 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms