RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 FAM177BA6PVY3 158 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 F6X3S4 739 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
PCNX4-211ENST00000555929 HLFQ16534 295 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 LRP10Q7Z4F1 713 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 MYD88Q99836 296 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
PCNX4-211ENST00000555929 NARFQ9UHQ1 456 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 MAP3K2Q9Y2U5 619 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 LY75O60449 1722 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 C4BP0C0L5 1744 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 TJP1Q07157 1748 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 C5P01031 1676 aa9.64□□□□□ -0.87
PCNX4-211ENST00000555929 MAP3K15Q6ZN16 1313 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 ATP5J2-PTCD1G3V325 749 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 ZBTB7AO95365 584 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 ZKSCAN2Q63HK3 967 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.63□□□□□ -0.87
PCNX4-211ENST00000555929 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 API5Q9BZZ5 524 aaKnown RBP9.63□□□□□ -0.87
PCNX4-211ENST00000555929 ZNF652Q9Y2D9 606 aa9.63□□□□□ -0.87
PCNX4-211ENST00000555929 SUPT16HQ9Y5B9 1047 aaKnown RBP9.63□□□□□ -0.87
PCNX4-211ENST00000555929 PTPRCP08575 1304 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 ERVV-1B6SEH8 477 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 NPHP1O15259 732 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 GPTP24298 496 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 NEXNQ0ZGT2 675 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 FTSJ3Q8IY81 847 aaKnown RBP9.62□□□□□ -0.87
PCNX4-211ENST00000555929 DNAAF4Q8WXU2 420 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 TNNQ9UQP3 1299 aa9.62□□□□□ -0.87
PCNX4-211ENST00000555929 USP42Q9H9J4 1324 aaKnown RBP9.61□□□□□ -0.87
PCNX4-211ENST00000555929 GYS1P13807 737 aa9.61□□□□□ -0.87
PCNX4-211ENST00000555929 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
PCNX4-211ENST00000555929 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
PCNX4-211ENST00000555929 TBC1D9BQ66K14 1250 aa9.61□□□□□ -0.87
PCNX4-211ENST00000555929 ATF7IPQ6VMQ6 1270 aa9.61□□□□□ -0.87
PCNX4-211ENST00000555929 GIGYF2Q6Y7W6 1299 aaKnown RBP9.61□□□□□ -0.87
PCNX4-211ENST00000555929 SLAIN1Q8ND83 568 aa9.61□□□□□ -0.87
PCNX4-211ENST00000555929 METTL22Q9BUU2 404 aaPredicted RBP9.61□□□□□ -0.87
PCNX4-211ENST00000555929 NIP7Q9Y221 180 aaKnown RBP eCLIP9.61□□□□□ -0.87
PCNX4-211ENST00000555929 TRIM27P14373 513 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
PCNX4-211ENST00000555929 RRP1P56182 461 aaKnown RBP9.6□□□□□ -0.87
PCNX4-211ENST00000555929 TCIRG1Q13488 830 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 CWF19L2Q2TBE0 894 aaKnown RBP9.6□□□□□ -0.87
PCNX4-211ENST00000555929 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 RTL5Q5HYW3 569 aaPredicted RBP9.6□□□□□ -0.87
PCNX4-211ENST00000555929 CLEC4GQ6UXB4 293 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 DZIP1LQ8IYY4 767 aaKnown RBP9.6□□□□□ -0.87
PCNX4-211ENST00000555929 NLGN1Q8N2Q7 840 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 PANK1Q8TE04 598 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 ARHGAP45Q92619 1136 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 SETDB2Q96T68 719 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 ZNF831Q5JPB2 1677 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 ADCY9O60503 1353 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 RGPD3A6NKT7 1758 aaPredicted RBP9.6□□□□□ -0.87
PCNX4-211ENST00000555929 RGPD4Q7Z3J3 1758 aa9.6□□□□□ -0.87
PCNX4-211ENST00000555929 RREB1Q92766 1687 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-211ENST00000555929 MS4A1P11836 297 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 IRX6P78412 446 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-211ENST00000555929 NFIXQ14938 502 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 JARID2Q92833 1246 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-211ENST00000555929 SRCIN1Q9C0H9 1055 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 LAMB4A4D0S4 1761 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 MYH14Q7Z406 1995 aaKnown RBP9.59□□□□□ -0.87
PCNX4-211ENST00000555929 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
PCNX4-211ENST00000555929 NUP188Q5SRE5 1749 aa9.59□□□□□ -0.87
PCNX4-211ENST00000555929 IGKV5-2P06315 115 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 MMP10P09238 476 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 POLD1P28340 1107 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 BEND3Q5T5X7 828 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 C20orf194Q5TEA3 1177 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 NBPF5PQ86XG9 351 aaPredicted RBP9.58□□□□□ -0.88
PCNX4-211ENST00000555929 ITPRIPQ8IWB1 547 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 ZNF34Q8IZ26 560 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 SLC16A10Q8TF71 515 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 CWC25Q9NXE8 425 aaPredicted RBP9.58□□□□□ -0.88
PCNX4-211ENST00000555929 C9orf78Q9NZ63 289 aaPredicted RBP9.58□□□□□ -0.88
PCNX4-211ENST00000555929 TRMT112Q9UI30 125 aaKnown RBP9.58□□□□□ -0.88
PCNX4-211ENST00000555929 TAF1LQ8IZX4 1826 aa9.58□□□□□ -0.88
PCNX4-211ENST00000555929 CICQ96RK0 1608 aaPredicted RBP9.57□□□□□ -0.88
PCNX4-211ENST00000555929 NEURL1BA8MQ27 555 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 SERPINB2P05120 415 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 RLBP1P12271 317 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 TM4SF1P30408 202 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 CCT4P50991 539 aaKnown RBP9.57□□□□□ -0.88
PCNX4-211ENST00000555929 PARP10Q53GL7 1025 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 SUSD4Q5VX71 490 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 PPP1R42Q7Z4L9 355 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 NLRP10Q86W26 655 aa9.57□□□□□ -0.88
PCNX4-211ENST00000555929 TMEM57Q8N5G2 664 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms