RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 C6orf163Q5TEZ5 329 aa20.1■□□□□ 0.81
SYNE3-204ENST00000555759 ORC3Q9UBD5 711 aaPredicted RBP20.1■□□□□ 0.81
SYNE3-204ENST00000555759 GSTTP1A0A1W2PQM5 241 aa20.1■□□□□ 0.81
SYNE3-204ENST00000555759 RRS1Q15050 365 aaKnown RBP20.1■□□□□ 0.81
SYNE3-204ENST00000555759 LARP1Q6PKG0 1096 aaKnown RBP20.1■□□□□ 0.81
SYNE3-204ENST00000555759 PPM1EQ8WY54 764 aa20.1■□□□□ 0.81
SYNE3-204ENST00000555759 SLC12A7Q9Y666 1083 aa20.1■□□□□ 0.81
SYNE3-204ENST00000555759 ZNF213O14771 459 aa20.09■□□□□ 0.81
SYNE3-204ENST00000555759 DISP3Q9P2K9 1392 aa20.09■□□□□ 0.81
SYNE3-204ENST00000555759 A0A1B0GUA9 196 aa20.09■□□□□ 0.81
SYNE3-204ENST00000555759 TATP17735 454 aaPredicted RBP20.09■□□□□ 0.81
SYNE3-204ENST00000555759 MCM10Q7L590 875 aa20.09■□□□□ 0.81
SYNE3-204ENST00000555759 RMND1Q9NWS8 449 aa20.09■□□□□ 0.81
SYNE3-204ENST00000555759 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
SYNE3-204ENST00000555759 FAM76AQ8TAV0 307 aa20.09■□□□□ 0.81
SYNE3-204ENST00000555759 RSRC1Q96IZ7 334 aaKnown RBP20.09■□□□□ 0.81
SYNE3-204ENST00000555759 GOLGA8AA7E2F4 631 aa20.08■□□□□ 0.81
SYNE3-204ENST00000555759 F6X3S4 739 aa20.08■□□□□ 0.81
SYNE3-204ENST00000555759 IFIT1P09914 478 aaKnown RBP20.08■□□□□ 0.81
SYNE3-204ENST00000555759 POTEDQ86YR6 584 aa20.08■□□□□ 0.81
SYNE3-204ENST00000555759 CCDC155Q8N6L0 562 aa20.08■□□□□ 0.81
SYNE3-204ENST00000555759 CAMSAP2Q08AD1 1489 aa20.08■□□□□ 0.8
SYNE3-204ENST00000555759 POTEJP0CG39 1038 aa20.08■□□□□ 0.8
SYNE3-204ENST00000555759 B4GALNT4Q76KP1 1039 aa20.08■□□□□ 0.8
SYNE3-204ENST00000555759 CEP57Q86XR8 500 aa20.08■□□□□ 0.8
SYNE3-204ENST00000555759 ZGPATQ8N5A5 531 aaKnown RBP20.08■□□□□ 0.8
SYNE3-204ENST00000555759 RAB34Q9BZG1 259 aa20.08■□□□□ 0.8
SYNE3-204ENST00000555759 EVCP57679 992 aa20.08■□□□□ 0.8
SYNE3-204ENST00000555759 KRT83P78385 493 aa20.07■□□□□ 0.8
SYNE3-204ENST00000555759 FLIIQ13045 1269 aa20.07■□□□□ 0.8
SYNE3-204ENST00000555759 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
SYNE3-204ENST00000555759 IARSP41252 1262 aaKnown RBP20.07■□□□□ 0.8
SYNE3-204ENST00000555759 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
SYNE3-204ENST00000555759 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
SYNE3-204ENST00000555759 IDH1O75874 414 aaKnown RBP20.07■□□□□ 0.8
SYNE3-204ENST00000555759 MYL6BP14649 208 aa20.07■□□□□ 0.8
SYNE3-204ENST00000555759 MATR3P43243 847 aaKnown RBP eCLIP20.07■□□□□ 0.8
SYNE3-204ENST00000555759 AMPD3Q01432 767 aa20.07■□□□□ 0.8
SYNE3-204ENST00000555759 SPATA24Q86W54 205 aa20.07■□□□□ 0.8
SYNE3-204ENST00000555759 USP26Q9BXU7 913 aa20.07■□□□□ 0.8
SYNE3-204ENST00000555759 PLCD3Q8N3E9 789 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 TACC1O75410 805 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 UTP14CQ5TAP6 766 aaKnown RBP20.06■□□□□ 0.8
SYNE3-204ENST00000555759 NECAB1Q8N987 351 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 CCDC8Q9H0W5 538 aaPredicted RBP20.06■□□□□ 0.8
SYNE3-204ENST00000555759 STMN4Q9H169 189 aaPredicted RBP20.06■□□□□ 0.8
SYNE3-204ENST00000555759 FAM177BA6PVY3 158 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 BMP15O95972 392 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 POLR3DP05423 398 aaPredicted RBP20.06■□□□□ 0.8
SYNE3-204ENST00000555759 DNA2P51530 1060 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 ATL3Q6DD88 541 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 DDX12PQ92771 950 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 RTL1A6NKG5 1358 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 CCDC114Q96M63 670 aa20.06■□□□□ 0.8
SYNE3-204ENST00000555759 KRT86O43790 486 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.05■□□□□ 0.8
SYNE3-204ENST00000555759 TMCO5BA8MYB1 307 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 AKR1B10O60218 316 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 ANKRD24Q8TF21 1146 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 RNF41Q9H4P4 317 aaPredicted RBP20.05■□□□□ 0.8
SYNE3-204ENST00000555759 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 ISM2Q6H9L7 571 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 CCDC129Q6ZRS4 1044 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 DCTPP1Q9H773 170 aa20.05■□□□□ 0.8
SYNE3-204ENST00000555759 PPP2R3AQ06190 1150 aa20.04■□□□□ 0.8
SYNE3-204ENST00000555759 NAPBQ9H115 298 aa20.04■□□□□ 0.8
SYNE3-204ENST00000555759 MPHOSPH8Q99549 860 aa20.04■□□□□ 0.8
SYNE3-204ENST00000555759 HYPKQ9NX55 129 aa20.04■□□□□ 0.8
SYNE3-204ENST00000555759 MKRN1Q9UHC7 482 aaKnown RBP20.04■□□□□ 0.8
SYNE3-204ENST00000555759 ATP2C2O75185 946 aa20.04■□□□□ 0.8
SYNE3-204ENST00000555759 AFAP1L1Q8TED9 768 aa20.04■□□□□ 0.8
SYNE3-204ENST00000555759 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
SYNE3-204ENST00000555759 RHPN1Q8TCX5 695 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 FBF1Q8TES7 1133 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 ZMYM3Q14202 1370 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 STAMBPO95630 424 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 TRIM21P19474 475 aaKnown RBP20.03■□□□□ 0.8
SYNE3-204ENST00000555759 DNAJC21Q5F1R6 531 aaKnown RBP20.03■□□□□ 0.8
SYNE3-204ENST00000555759 ZBTB40Q9NUA8 1239 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 MIS18AQ9NYP9 233 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 DESP17661 470 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 UBE4AQ14139 1066 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 IFNKQ9P0W0 207 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 CABP4P57796 275 aa20.03■□□□□ 0.8
SYNE3-204ENST00000555759 BRF1Q92994 677 aa20.02■□□□□ 0.8
SYNE3-204ENST00000555759 POLR3AO14802 1390 aaPredicted RBP20.02■□□□□ 0.8
SYNE3-204ENST00000555759 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
SYNE3-204ENST00000555759 LMOD1P29536 600 aaPredicted RBP20.02■□□□□ 0.8
SYNE3-204ENST00000555759 CCDC6Q16204 474 aa20.02■□□□□ 0.8
SYNE3-204ENST00000555759 FSD2A1L4K1 749 aa20.02■□□□□ 0.8
SYNE3-204ENST00000555759 DMTNQ08495 405 aa20.02■□□□□ 0.8
SYNE3-204ENST00000555759 TMEM266Q2M3C6 531 aa20.02■□□□□ 0.8
SYNE3-204ENST00000555759 CCDC96Q2M329 555 aa20.02■□□□□ 0.79
SYNE3-204ENST00000555759 TXNDC2Q86VQ3 553 aa20.02■□□□□ 0.79
SYNE3-204ENST00000555759 SELENOOQ9BVL4 669 aa20.02■□□□□ 0.79
SYNE3-204ENST00000555759 INSRP06213 1382 aa20.02■□□□□ 0.79
SYNE3-204ENST00000555759 PPP1R42Q7Z4L9 355 aa20.01■□□□□ 0.79
SYNE3-204ENST00000555759 NCOA7Q8NI08 942 aa20.01■□□□□ 0.79
SYNE3-204ENST00000555759 TTC14Q96N46 770 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms