RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 CRY2Q49AN0 593 aa25.37■■□□□ 1.65
SUPT16H-203ENST00000555752 MIS18AQ9NYP9 233 aa25.37■■□□□ 1.65
SUPT16H-203ENST00000555752 EIF6P56537 245 aaKnown RBP25.36■■□□□ 1.65
SUPT16H-203ENST00000555752 PAXIP1Q6ZW49 1069 aaPredicted RBP25.36■■□□□ 1.65
SUPT16H-203ENST00000555752 CAPNS2Q96L46 248 aa25.36■■□□□ 1.65
SUPT16H-203ENST00000555752 THSD7BQ9C0I4 1608 aa25.36■■□□□ 1.65
SUPT16H-203ENST00000555752 TRAF5O00463 557 aa25.35■■□□□ 1.65
SUPT16H-203ENST00000555752 CYP4F22Q6NT55 531 aa25.35■■□□□ 1.65
SUPT16H-203ENST00000555752 LAMB4A4D0S4 1761 aa25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 TCERG1O14776 1098 aaKnown RBP25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 SLC34A2O95436 690 aa25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 U2AF1L5P0DN76 240 aaPredicted RBP25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 LMOD1P29536 600 aaPredicted RBP25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 U2AF1Q01081 240 aaKnown RBP eCLIP25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 CST9Q5W186 159 aa25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 CFAP53Q96M91 514 aa25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 NUP98P52948 1817 aa25.34■■□□□ 1.65
SUPT16H-203ENST00000555752 TSKSQ9UJT2 592 aa25.33■■□□□ 1.65
SUPT16H-203ENST00000555752 GPTP24298 496 aa25.32■■□□□ 1.64
SUPT16H-203ENST00000555752 LARGE2Q8N3Y3 721 aa25.32■■□□□ 1.64
SUPT16H-203ENST00000555752 TTLL7Q6ZT98 887 aa25.31■■□□□ 1.64
SUPT16H-203ENST00000555752 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
SUPT16H-203ENST00000555752 NYXQ9GZU5 481 aa25.31■■□□□ 1.64
SUPT16H-203ENST00000555752 UBN2Q6ZU65 1347 aa25.31■■□□□ 1.64
SUPT16H-203ENST00000555752 TRPM7Q96QT4 1865 aa25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 CCDC85CA6NKD9 419 aa25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 HOXA10P31260 410 aaPredicted RBP25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 TAF7Q15545 349 aaPredicted RBP25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 CC2D2BQ6DHV5 1058 aa25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 C3orf67Q6ZVT6 689 aa25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 GPR101Q96P66 508 aaPredicted RBP25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 NUDCQ9Y266 331 aa25.3■■□□□ 1.64
SUPT16H-203ENST00000555752 SUSD4Q5VX71 490 aa25.29■■□□□ 1.64
SUPT16H-203ENST00000555752 RRP7AQ9Y3A4 280 aaKnown RBP25.29■■□□□ 1.64
SUPT16H-203ENST00000555752 MAP3K15Q6ZN16 1313 aa25.29■■□□□ 1.64
SUPT16H-203ENST00000555752 AOC2O75106 756 aa25.28■■□□□ 1.64
SUPT16H-203ENST00000555752 ECE1P42892 770 aa25.28■■□□□ 1.64
SUPT16H-203ENST00000555752 ZBTB3Q9H5J0 574 aa25.28■■□□□ 1.64
SUPT16H-203ENST00000555752 ERVV-1B6SEH8 477 aa25.27■■□□□ 1.64
SUPT16H-203ENST00000555752 PPEF1O14829 653 aaPredicted RBP25.27■■□□□ 1.64
SUPT16H-203ENST00000555752 USP50Q70EL3 339 aaPredicted RBP25.27■■□□□ 1.64
SUPT16H-203ENST00000555752 BEGAINQ9BUH8 593 aa25.27■■□□□ 1.64
SUPT16H-203ENST00000555752 TLL2Q9Y6L7 1015 aa25.27■■□□□ 1.64
SUPT16H-203ENST00000555752 RIC1Q4ADV7 1423 aa25.27■■□□□ 1.64
SUPT16H-203ENST00000555752 HTATSF1O43719 755 aaKnown RBP25.26■■□□□ 1.63
SUPT16H-203ENST00000555752 MYL6BP14649 208 aa25.26■■□□□ 1.63
SUPT16H-203ENST00000555752 NIM1KQ8IY84 436 aa25.26■■□□□ 1.63
SUPT16H-203ENST00000555752 KDM3BQ7LBC6 1761 aa25.26■■□□□ 1.63
SUPT16H-203ENST00000555752 PPP2R1AP30153 589 aa25.25■■□□□ 1.63
SUPT16H-203ENST00000555752 AOC3Q16853 763 aa25.25■■□□□ 1.63
SUPT16H-203ENST00000555752 RBM17Q96I25 401 aaKnown RBP25.25■■□□□ 1.63
SUPT16H-203ENST00000555752 PPIP5K2O43314 1243 aa25.24■■□□□ 1.63
SUPT16H-203ENST00000555752 KIF6Q6ZMV9 814 aa25.24■■□□□ 1.63
SUPT16H-203ENST00000555752 CRAMP1Q96RY5 1269 aa25.24■■□□□ 1.63
SUPT16H-203ENST00000555752 NTSR2O95665 410 aa25.23■■□□□ 1.63
SUPT16H-203ENST00000555752 GPRC5DQ9NZD1 345 aa25.23■■□□□ 1.63
SUPT16H-203ENST00000555752 DLG5Q8TDM6 1919 aa25.22■■□□□ 1.63
SUPT16H-203ENST00000555752 IBTKQ9P2D0 1353 aaPredicted RBP25.22■■□□□ 1.63
SUPT16H-203ENST00000555752 MLLT1Q03111 559 aaPredicted RBP25.22■■□□□ 1.63
SUPT16H-203ENST00000555752 ZNF34Q8IZ26 560 aa25.22■■□□□ 1.63
SUPT16H-203ENST00000555752 EIF4A1P60842 406 aaKnown RBP25.21■■□□□ 1.63
SUPT16H-203ENST00000555752 GRIPAP1Q4V328 841 aa25.21■■□□□ 1.63
SUPT16H-203ENST00000555752 THUMPD2Q9BTF0 503 aaKnown RBP25.21■■□□□ 1.63
SUPT16H-203ENST00000555752 GLIS2Q9BZE0 524 aaPredicted RBP25.21■■□□□ 1.63
SUPT16H-203ENST00000555752 ADARB2Q9NS39 739 aaKnown RBP25.21■■□□□ 1.63
SUPT16H-203ENST00000555752 CELF2O95319 508 aaKnown RBP25.2■■□□□ 1.62
SUPT16H-203ENST00000555752 CXCL9Q07325 125 aa25.2■■□□□ 1.62
SUPT16H-203ENST00000555752 SAPCD2Q86UD0 394 aa25.2■■□□□ 1.62
SUPT16H-203ENST00000555752 MAP2K2P36507 400 aa25.19■■□□□ 1.62
SUPT16H-203ENST00000555752 RGS19P49795 217 aa25.19■■□□□ 1.62
SUPT16H-203ENST00000555752 GMPSP49915 693 aaPredicted RBP25.19■■□□□ 1.62
SUPT16H-203ENST00000555752 ATP6V0A2Q9Y487 856 aa25.18■■□□□ 1.62
SUPT16H-203ENST00000555752 CASP8AP2Q9UKL3 1982 aa25.18■■□□□ 1.62
SUPT16H-203ENST00000555752 GIGYF2Q6Y7W6 1299 aaKnown RBP25.17■■□□□ 1.62
SUPT16H-203ENST00000555752 ZNF408Q9H9D4 720 aa25.17■■□□□ 1.62
SUPT16H-203ENST00000555752 ZNRF3Q9ULT6 936 aa25.17■■□□□ 1.62
SUPT16H-203ENST00000555752 ABCC4O15439 1325 aa25.16■■□□□ 1.62
SUPT16H-203ENST00000555752 PNISRQ8TF01 805 aaKnown RBP25.16■■□□□ 1.62
SUPT16H-203ENST00000555752 CFAP44Q96MT7 982 aa25.16■■□□□ 1.62
SUPT16H-203ENST00000555752 MCOLN1Q9GZU1 580 aa25.16■■□□□ 1.62
SUPT16H-203ENST00000555752 HIRAP54198 1017 aaPredicted RBP25.15■■□□□ 1.62
SUPT16H-203ENST00000555752 NLRP3Q96P20 1036 aa25.15■■□□□ 1.62
SUPT16H-203ENST00000555752 SHTN1A0MZ66 631 aa25.14■■□□□ 1.62
SUPT16H-203ENST00000555752 PPP1R42Q7Z4L9 355 aa25.14■■□□□ 1.62
SUPT16H-203ENST00000555752 RAD17O75943 681 aa25.13■■□□□ 1.61
SUPT16H-203ENST00000555752 DLK2Q6UY11 383 aa25.13■■□□□ 1.61
SUPT16H-203ENST00000555752 TRPM4Q8TD43 1214 aa25.13■■□□□ 1.61
SUPT16H-203ENST00000555752 ZIC5Q96T25 663 aa25.13■■□□□ 1.61
SUPT16H-203ENST00000555752 RTFDC1Q9BY42 306 aaPredicted RBP25.13■■□□□ 1.61
SUPT16H-203ENST00000555752 PGAP2Q9UHJ9 254 aa25.13■■□□□ 1.61
SUPT16H-203ENST00000555752 LAMB2P55268 1798 aa25.13■■□□□ 1.61
SUPT16H-203ENST00000555752 CIAPIN1Q6FI81 312 aa25.12■■□□□ 1.61
SUPT16H-203ENST00000555752 TMX4Q9H1E5 349 aaPredicted RBP25.12■■□□□ 1.61
SUPT16H-203ENST00000555752 VPS33BQ9H267 617 aa25.12■■□□□ 1.61
SUPT16H-203ENST00000555752 ANXA1P04083 346 aa25.11■■□□□ 1.61
SUPT16H-203ENST00000555752 BRPF1P55201 1214 aaPredicted RBP25.11■■□□□ 1.61
SUPT16H-203ENST00000555752 PARP10Q53GL7 1025 aa25.11■■□□□ 1.61
SUPT16H-203ENST00000555752 SLC10A5Q5PT55 438 aa25.11■■□□□ 1.61
SUPT16H-203ENST00000555752 DPP8Q6V1X1 898 aaPredicted RBP25.11■■□□□ 1.61
SUPT16H-203ENST00000555752 LRP10Q7Z4F1 713 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms