RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 IGHDP01880 384 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 GCP02774 474 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 TRIM27P14373 513 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 MORN1Q5T089 497 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 MCM10Q7L590 875 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 C8orf58Q8NAV2 365 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 SNRKQ9NRH2 765 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 NOB1Q9ULX3 412 aaKnown RBP9.96□□□□□ -0.81
LINC00641-202ENST00000555688 CRB1P82279 1406 aa9.96□□□□□ -0.81
LINC00641-202ENST00000555688 XIRP1Q702N8 1843 aaKnown RBP9.96□□□□□ -0.82
LINC00641-202ENST00000555688 ATF3P18847 181 aa9.96□□□□□ -0.82
LINC00641-202ENST00000555688 BCAMP50895 628 aa9.96□□□□□ -0.82
LINC00641-202ENST00000555688 AAMPQ13685 434 aa9.96□□□□□ -0.82
LINC00641-202ENST00000555688 ATF7IPQ6VMQ6 1270 aa9.96□□□□□ -0.82
LINC00641-202ENST00000555688 ARHGEF25Q86VW2 580 aa9.96□□□□□ -0.82
LINC00641-202ENST00000555688 SKAP1Q86WV1 359 aa9.96□□□□□ -0.82
LINC00641-202ENST00000555688 DZIP1LQ8IYY4 767 aaKnown RBP9.96□□□□□ -0.82
LINC00641-202ENST00000555688 TCERG1O14776 1098 aaKnown RBP9.95□□□□□ -0.82
LINC00641-202ENST00000555688 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
LINC00641-202ENST00000555688 LTV1Q96GA3 475 aaPredicted RBP9.95□□□□□ -0.82
LINC00641-202ENST00000555688 ALS2Q96Q42 1657 aa9.95□□□□□ -0.82
LINC00641-202ENST00000555688 AP1G2O75843 785 aa9.94□□□□□ -0.82
LINC00641-202ENST00000555688 TWISTNBQ3B726 338 aaPredicted RBP9.94□□□□□ -0.82
LINC00641-202ENST00000555688 NBPF6Q5VWK0 638 aa9.94□□□□□ -0.82
LINC00641-202ENST00000555688 GAS2L2Q8NHY3 880 aa9.94□□□□□ -0.82
LINC00641-202ENST00000555688 NBPF4Q96M43 638 aa9.94□□□□□ -0.82
LINC00641-202ENST00000555688 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
LINC00641-202ENST00000555688 ELL2O00472 640 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-202ENST00000555688 HTATSF1O43719 755 aaKnown RBP9.93□□□□□ -0.82
LINC00641-202ENST00000555688 DDX17Q92841 729 aaKnown RBP9.93□□□□□ -0.82
LINC00641-202ENST00000555688 KIF16BQ96L93 1317 aa9.93□□□□□ -0.82
LINC00641-202ENST00000555688 IPO8O15397 1037 aaKnown RBP9.93□□□□□ -0.82
LINC00641-202ENST00000555688 APLP1P51693 650 aa9.93□□□□□ -0.82
LINC00641-202ENST00000555688 PUS10Q3MIT2 529 aaKnown RBP9.93□□□□□ -0.82
LINC00641-202ENST00000555688 USHBP1Q8N6Y0 703 aa9.93□□□□□ -0.82
LINC00641-202ENST00000555688 SLC27A5Q9Y2P5 690 aa9.93□□□□□ -0.82
LINC00641-202ENST00000555688 MSH6P52701 1360 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 RGPD2P0DJD1 1756 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 MED1Q15648 1581 aaPredicted RBP9.92□□□□□ -0.82
LINC00641-202ENST00000555688 KRT24Q2M2I5 525 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 Q3C1V9 767 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 MTMR14Q8NCE2 650 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 ARHGAP45Q92619 1136 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 KIAA0232Q92628 1395 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 NCAPD2Q15021 1401 aa9.92□□□□□ -0.82
LINC00641-202ENST00000555688 RAD21O60216 631 aa9.91□□□□□ -0.82
LINC00641-202ENST00000555688 FTSJ3Q8IY81 847 aaKnown RBP9.91□□□□□ -0.82
LINC00641-202ENST00000555688 TMEM57Q8N5G2 664 aa9.91□□□□□ -0.82
LINC00641-202ENST00000555688 IL17REQ8NFR9 667 aa9.91□□□□□ -0.82
LINC00641-202ENST00000555688 GNAT3A8MTJ3 354 aa9.91□□□□□ -0.82
LINC00641-202ENST00000555688 USP17L8P0C7I0 530 aa9.91□□□□□ -0.82
LINC00641-202ENST00000555688 RTF1Q92541 710 aaKnown RBP9.91□□□□□ -0.82
LINC00641-202ENST00000555688 LRRC59Q96AG4 307 aaKnown RBP9.91□□□□□ -0.82
LINC00641-202ENST00000555688 MIS18AQ9NYP9 233 aa9.91□□□□□ -0.82
LINC00641-202ENST00000555688 ZNF335Q9H4Z2 1342 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-202ENST00000555688 LRRC37A3O60309 1634 aa9.9□□□□□ -0.82
LINC00641-202ENST00000555688 APBB1O00213 710 aa9.9□□□□□ -0.82
LINC00641-202ENST00000555688 THSD4Q6ZMP0 1018 aa9.9□□□□□ -0.82
LINC00641-202ENST00000555688 RETREG3Q86VR2 466 aa9.9□□□□□ -0.82
LINC00641-202ENST00000555688 HELBQ8NG08 1087 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-202ENST00000555688 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
LINC00641-202ENST00000555688 ZBTB40Q9NUA8 1239 aa9.9□□□□□ -0.82
LINC00641-202ENST00000555688 DDX19BQ9UMR2 479 aa9.9□□□□□ -0.82
LINC00641-202ENST00000555688 NPHP3Q7Z494 1330 aa9.9□□□□□ -0.82
LINC00641-202ENST00000555688 PXDNQ92626 1479 aa9.9□□□□□ -0.83
LINC00641-202ENST00000555688 ZBTB7CA1YPR0 619 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 CFAP99D6REC4 459 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 BRINP3Q76B58 766 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 POM121Q96HA1 1249 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 MAP3K5Q99683 1374 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 WBP1LQ9NX94 342 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 RGPD5Q99666 1765 aa9.89□□□□□ -0.83
LINC00641-202ENST00000555688 SPATA31A3Q5VYP0 1347 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 TRAK2O60296 914 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 ITPRIPQ8IWB1 547 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 ANKRD24Q8TF21 1146 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 PCDHB3Q9Y5E6 796 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 CAMTA1Q9Y6Y1 1673 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 CEMIPQ8WUJ3 1361 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 ABCC4O15439 1325 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 ZBTB7BO15156 539 aaPredicted RBP9.88□□□□□ -0.83
LINC00641-202ENST00000555688 ZC3H6P61129 1189 aaKnown RBP9.88□□□□□ -0.83
LINC00641-202ENST00000555688 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 COL18A1P39060 1754 aa9.88□□□□□ -0.83
LINC00641-202ENST00000555688 TNS3Q68CZ2 1445 aa9.87□□□□□ -0.83
LINC00641-202ENST00000555688 PRM3Q9NNZ6 103 aa9.87□□□□□ -0.83
LINC00641-202ENST00000555688 BABAM1Q9NWV8 329 aa9.87□□□□□ -0.83
LINC00641-202ENST00000555688 CRYBG1Q9Y4K1 1723 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 LMO7Q8WWI1 1683 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 NR1I2O75469 434 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 HDAC1Q13547 482 aaPredicted RBP9.86□□□□□ -0.83
LINC00641-202ENST00000555688 TAF7Q15545 349 aaPredicted RBP9.86□□□□□ -0.83
LINC00641-202ENST00000555688 BRICD5Q6PL45 260 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 NYAP1Q6ZVC0 841 aa9.86□□□□□ -0.83
LINC00641-202ENST00000555688 SCUBE3Q8IX30 993 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms