RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 PHAXQ9H814 394 aaKnown RBP19.5■□□□□ 0.71
IFT43-211ENST00000555677 IL16Q14005 1332 aa19.5■□□□□ 0.71
IFT43-211ENST00000555677 NFKBIEO00221 500 aa19.49■□□□□ 0.71
IFT43-211ENST00000555677 CRY2Q49AN0 593 aa19.49■□□□□ 0.71
IFT43-211ENST00000555677 NLRP10Q86W26 655 aa19.49■□□□□ 0.71
IFT43-211ENST00000555677 C7orf43Q8WVR3 580 aa19.49■□□□□ 0.71
IFT43-211ENST00000555677 UTP14AQ9BVJ6 771 aaKnown RBP19.49■□□□□ 0.71
IFT43-211ENST00000555677 LMNB1P20700 586 aa19.48■□□□□ 0.71
IFT43-211ENST00000555677 ALDH1B1P30837 517 aa19.48■□□□□ 0.71
IFT43-211ENST00000555677 SLC10A5Q5PT55 438 aa19.48■□□□□ 0.71
IFT43-211ENST00000555677 WDR63Q8IWG1 891 aa19.48■□□□□ 0.71
IFT43-211ENST00000555677 RIC1Q4ADV7 1423 aa19.48■□□□□ 0.71
IFT43-211ENST00000555677 C1QTNF8P60827 252 aa19.47■□□□□ 0.71
IFT43-211ENST00000555677 CCDC30Q5VVM6 783 aa19.47■□□□□ 0.71
IFT43-211ENST00000555677 TIAM2Q8IVF5 1701 aa19.47■□□□□ 0.71
IFT43-211ENST00000555677 CACNA1FO60840 1977 aa19.46■□□□□ 0.71
IFT43-211ENST00000555677 SYNE4Q8N205 404 aa19.46■□□□□ 0.71
IFT43-211ENST00000555677 CHMP4AQ9BY43 222 aa19.46■□□□□ 0.71
IFT43-211ENST00000555677 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
IFT43-211ENST00000555677 SOGA3Q5TF21 947 aa19.45■□□□□ 0.7
IFT43-211ENST00000555677 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
IFT43-211ENST00000555677 ZNF428Q96B54 188 aa19.45■□□□□ 0.7
IFT43-211ENST00000555677 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
IFT43-211ENST00000555677 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
IFT43-211ENST00000555677 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
IFT43-211ENST00000555677 TAF1P21675 1872 aa19.45■□□□□ 0.7
IFT43-211ENST00000555677 DDX60Q8IY21 1712 aaKnown RBP19.45■□□□□ 0.7
IFT43-211ENST00000555677 ATP5J2-PTCD1G3V325 749 aa19.44■□□□□ 0.7
IFT43-211ENST00000555677 HOXA10P31260 410 aaPredicted RBP19.44■□□□□ 0.7
IFT43-211ENST00000555677 OLFM4Q6UX06 510 aa19.44■□□□□ 0.7
IFT43-211ENST00000555677 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
IFT43-211ENST00000555677 RPGRQ92834 1020 aaKnown RBP19.44■□□□□ 0.7
IFT43-211ENST00000555677 RNF123Q5XPI4 1314 aa19.44■□□□□ 0.7
IFT43-211ENST00000555677 LTBP3Q9NS15 1303 aa19.44■□□□□ 0.7
IFT43-211ENST00000555677 KIF3CO14782 793 aa19.43■□□□□ 0.7
IFT43-211ENST00000555677 RBM17Q96I25 401 aaKnown RBP19.43■□□□□ 0.7
IFT43-211ENST00000555677 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
IFT43-211ENST00000555677 FANCIQ9NVI1 1328 aa19.43■□□□□ 0.7
IFT43-211ENST00000555677 TCERG1O14776 1098 aaKnown RBP19.42■□□□□ 0.7
IFT43-211ENST00000555677 HCLS1P14317 486 aaPredicted RBP19.42■□□□□ 0.7
IFT43-211ENST00000555677 GOLGA2Q08379 1002 aa19.42■□□□□ 0.7
IFT43-211ENST00000555677 CCDC93Q567U6 631 aa19.42■□□□□ 0.7
IFT43-211ENST00000555677 CRAMP1Q96RY5 1269 aa19.42■□□□□ 0.7
IFT43-211ENST00000555677 TAOK3Q9H2K8 898 aa19.42■□□□□ 0.7
IFT43-211ENST00000555677 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
IFT43-211ENST00000555677 TRIM28Q13263 835 aaKnown RBP19.41■□□□□ 0.7
IFT43-211ENST00000555677 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
IFT43-211ENST00000555677 ZC3H4Q9UPT8 1303 aaKnown RBP19.41■□□□□ 0.7
IFT43-211ENST00000555677 VAMP4O75379 141 aa19.4■□□□□ 0.7
IFT43-211ENST00000555677 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
IFT43-211ENST00000555677 FAM89AQ96GI7 184 aa19.4■□□□□ 0.7
IFT43-211ENST00000555677 STK31Q9BXU1 1019 aa19.4■□□□□ 0.7
IFT43-211ENST00000555677 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
IFT43-211ENST00000555677 FKBP4Q02790 459 aaKnown RBP eCLIP19.39■□□□□ 0.69
IFT43-211ENST00000555677 EXOSC9Q06265 439 aaKnown RBP19.39■□□□□ 0.69
IFT43-211ENST00000555677 MYD88Q99836 296 aa19.39■□□□□ 0.69
IFT43-211ENST00000555677 KDM2BQ8NHM5 1336 aa19.39■□□□□ 0.69
IFT43-211ENST00000555677 GLTPD2A6NH11 291 aa19.38■□□□□ 0.69
IFT43-211ENST00000555677 DDX58O95786 925 aaKnown RBP19.38■□□□□ 0.69
IFT43-211ENST00000555677 G2E3Q7L622 706 aa19.38■□□□□ 0.69
IFT43-211ENST00000555677 METTL22Q9BUU2 404 aaPredicted RBP19.38■□□□□ 0.69
IFT43-211ENST00000555677 RRAGCQ9HB90 399 aa19.38■□□□□ 0.69
IFT43-211ENST00000555677 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
IFT43-211ENST00000555677 ZNF521Q96K83 1311 aa19.37■□□□□ 0.69
IFT43-211ENST00000555677 RTL5Q5HYW3 569 aaPredicted RBP19.37■□□□□ 0.69
IFT43-211ENST00000555677 KSR2Q6VAB6 950 aa19.37■□□□□ 0.69
IFT43-211ENST00000555677 MAP3K2Q9Y2U5 619 aa19.37■□□□□ 0.69
IFT43-211ENST00000555677 ABCC4O15439 1325 aa19.36■□□□□ 0.69
IFT43-211ENST00000555677 PI4KAP2A4QPH2 592 aa19.36■□□□□ 0.69
IFT43-211ENST00000555677 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
IFT43-211ENST00000555677 SLC51AQ86UW1 340 aa19.36■□□□□ 0.69
IFT43-211ENST00000555677 PI4KAP1Q8N8J0 262 aa19.36■□□□□ 0.69
IFT43-211ENST00000555677 ZNF277Q9NRM2 450 aaPredicted RBP19.36■□□□□ 0.69
IFT43-211ENST00000555677 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
IFT43-211ENST00000555677 CC2D2BQ6DHV5 1058 aa19.35■□□□□ 0.69
IFT43-211ENST00000555677 DPY19L2Q6NUT2 758 aa19.35■□□□□ 0.69
IFT43-211ENST00000555677 ZBTB38Q8NAP3 1195 aaPredicted RBP19.35■□□□□ 0.69
IFT43-211ENST00000555677 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
IFT43-211ENST00000555677 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
IFT43-211ENST00000555677 TOMM70O94826 608 aa19.34■□□□□ 0.69
IFT43-211ENST00000555677 DDX46Q7L014 1031 aaKnown RBP19.34■□□□□ 0.69
IFT43-211ENST00000555677 PSMD1Q99460 953 aa19.34■□□□□ 0.69
IFT43-211ENST00000555677 WDR90Q96KV7 1748 aa19.34■□□□□ 0.69
IFT43-211ENST00000555677 IRS4O14654 1257 aaPredicted RBP19.33■□□□□ 0.68
IFT43-211ENST00000555677 BBOX1O75936 387 aa19.33■□□□□ 0.68
IFT43-211ENST00000555677 SF3B3Q15393 1217 aaKnown RBP19.33■□□□□ 0.68
IFT43-211ENST00000555677 GRIPAP1Q4V328 841 aa19.33■□□□□ 0.68
IFT43-211ENST00000555677 ATP6V0A2Q9Y487 856 aa19.33■□□□□ 0.68
IFT43-211ENST00000555677 IGKV5-2P06315 115 aa19.32■□□□□ 0.68
IFT43-211ENST00000555677 IARSP41252 1262 aaKnown RBP19.32■□□□□ 0.68
IFT43-211ENST00000555677 FLIIQ13045 1269 aa19.32■□□□□ 0.68
IFT43-211ENST00000555677 JARID2Q92833 1246 aaPredicted RBP19.32■□□□□ 0.68
IFT43-211ENST00000555677 CWC25Q9NXE8 425 aaPredicted RBP19.32■□□□□ 0.68
IFT43-211ENST00000555677 MYH3P11055 1940 aa19.31■□□□□ 0.68
IFT43-211ENST00000555677 POTECB2RU33 542 aa19.31■□□□□ 0.68
IFT43-211ENST00000555677 PCCAP05165 728 aaPredicted RBP19.31■□□□□ 0.68
IFT43-211ENST00000555677 GRAPQ13588 217 aa19.31■□□□□ 0.68
IFT43-211ENST00000555677 SP8Q8IXZ3 490 aa19.31■□□□□ 0.68
IFT43-211ENST00000555677 GRAPLQ8TC17 118 aaPredicted RBP19.31■□□□□ 0.68
IFT43-211ENST00000555677 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms