RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 PER1O15534 1290 aaPredicted RBP11.27□□□□□ -0.61
NEK9-206ENST00000555537 SNRPA1P09661 255 aaKnown RBP11.27□□□□□ -0.61
NEK9-206ENST00000555537 PSMD1Q99460 953 aa11.27□□□□□ -0.61
NEK9-206ENST00000555537 MCOLN1Q9GZU1 580 aa11.27□□□□□ -0.61
NEK9-206ENST00000555537 CEMIPQ8WUJ3 1361 aa11.27□□□□□ -0.61
NEK9-206ENST00000555537 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
NEK9-206ENST00000555537 MCM10Q7L590 875 aa11.26□□□□□ -0.61
NEK9-206ENST00000555537 LARGE2Q8N3Y3 721 aa11.26□□□□□ -0.61
NEK9-206ENST00000555537 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
NEK9-206ENST00000555537 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
NEK9-206ENST00000555537 PRKAR2BP31323 418 aa11.25□□□□□ -0.61
NEK9-206ENST00000555537 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
NEK9-206ENST00000555537 USP50Q70EL3 339 aaPredicted RBP11.25□□□□□ -0.61
NEK9-206ENST00000555537 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
NEK9-206ENST00000555537 ABCC12Q96J65 1359 aa11.25□□□□□ -0.61
NEK9-206ENST00000555537 CELF2O95319 508 aaKnown RBP11.24□□□□□ -0.61
NEK9-206ENST00000555537 MAP2K2P36507 400 aa11.24□□□□□ -0.61
NEK9-206ENST00000555537 CRY2Q49AN0 593 aa11.24□□□□□ -0.61
NEK9-206ENST00000555537 SAPCD2Q86UD0 394 aa11.24□□□□□ -0.61
NEK9-206ENST00000555537 ZNF408Q9H9D4 720 aa11.24□□□□□ -0.61
NEK9-206ENST00000555537 KIF7Q2M1P5 1343 aa11.24□□□□□ -0.61
NEK9-206ENST00000555537 COL3A1P02461 1466 aaPredicted RBP11.24□□□□□ -0.61
NEK9-206ENST00000555537 GPTP24298 496 aa11.23□□□□□ -0.61
NEK9-206ENST00000555537 DGKZQ13574 1117 aa11.23□□□□□ -0.61
NEK9-206ENST00000555537 DLK2Q6UY11 383 aa11.23□□□□□ -0.61
NEK9-206ENST00000555537 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
NEK9-206ENST00000555537 RPGRQ92834 1020 aaKnown RBP11.23□□□□□ -0.61
NEK9-206ENST00000555537 ZIC5Q96T25 663 aa11.23□□□□□ -0.61
NEK9-206ENST00000555537 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
NEK9-206ENST00000555537 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
NEK9-206ENST00000555537 PCDH10Q9P2E7 1040 aa11.23□□□□□ -0.61
NEK9-206ENST00000555537 PPIP5K2O43314 1243 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
NEK9-206ENST00000555537 CXCL9Q07325 125 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 AOC3Q16853 763 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 SUSD4Q5VX71 490 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 CC2D2BQ6DHV5 1058 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 TTLL7Q6ZT98 887 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 RTF1Q92541 710 aaKnown RBP11.22□□□□□ -0.61
NEK9-206ENST00000555537 THSD7BQ9C0I4 1608 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 ADARB2Q9NS39 739 aaKnown RBP11.22□□□□□ -0.61
NEK9-206ENST00000555537 GPRC5DQ9NZD1 345 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 CASP8AP2Q9UKL3 1982 aa11.22□□□□□ -0.61
NEK9-206ENST00000555537 RRP7AQ9Y3A4 280 aaKnown RBP11.22□□□□□ -0.61
NEK9-206ENST00000555537 PPEF1O14829 653 aaPredicted RBP11.21□□□□□ -0.61
NEK9-206ENST00000555537 HIRAP54198 1017 aaPredicted RBP11.21□□□□□ -0.61
NEK9-206ENST00000555537 RBM17Q96I25 401 aaKnown RBP11.21□□□□□ -0.61
NEK9-206ENST00000555537 NYXQ9GZU5 481 aa11.21□□□□□ -0.61
NEK9-206ENST00000555537 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.62
NEK9-206ENST00000555537 UBN2Q6ZU65 1347 aa11.2□□□□□ -0.62
NEK9-206ENST00000555537 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
NEK9-206ENST00000555537 MYL6BP14649 208 aa11.2□□□□□ -0.62
NEK9-206ENST00000555537 GMPSP49915 693 aaPredicted RBP11.2□□□□□ -0.62
NEK9-206ENST00000555537 CRAMP1Q96RY5 1269 aa11.2□□□□□ -0.62
NEK9-206ENST00000555537 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
NEK9-206ENST00000555537 NPC1L1Q9UHC9 1359 aa11.19□□□□□ -0.62
NEK9-206ENST00000555537 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
NEK9-206ENST00000555537 RGL2O15211 777 aa11.19□□□□□ -0.62
NEK9-206ENST00000555537 RAD17O75943 681 aa11.19□□□□□ -0.62
NEK9-206ENST00000555537 BRPF1P55201 1214 aaPredicted RBP11.19□□□□□ -0.62
NEK9-206ENST00000555537 TAF7Q15545 349 aaPredicted RBP11.19□□□□□ -0.62
NEK9-206ENST00000555537 MAP3K15Q6ZN16 1313 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 CA12O43570 354 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
NEK9-206ENST00000555537 SOX10P56693 466 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
NEK9-206ENST00000555537 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 USP48Q86UV5 1035 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 TRPM4Q8TD43 1214 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 PGAP2Q9UHJ9 254 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 ZNRF3Q9ULT6 936 aa11.18□□□□□ -0.62
NEK9-206ENST00000555537 CLSPNQ9HAW4 1339 aa11.17□□□□□ -0.62
NEK9-206ENST00000555537 NTSR2O95665 410 aa11.17□□□□□ -0.62
NEK9-206ENST00000555537 KIF6Q6ZMV9 814 aa11.17□□□□□ -0.62
NEK9-206ENST00000555537 ZNF34Q8IZ26 560 aa11.17□□□□□ -0.62
NEK9-206ENST00000555537 HHIPL1Q96JK4 782 aa11.17□□□□□ -0.62
NEK9-206ENST00000555537 BCL2L13Q9BXK5 485 aa11.17□□□□□ -0.62
NEK9-206ENST00000555537 ATP6V0A2Q9Y487 856 aa11.17□□□□□ -0.62
NEK9-206ENST00000555537 NUP98P52948 1817 aa11.16□□□□□ -0.62
NEK9-206ENST00000555537 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
NEK9-206ENST00000555537 HUNKP57058 714 aa11.16□□□□□ -0.62
NEK9-206ENST00000555537 CDC37L1Q7L3B6 337 aa11.16□□□□□ -0.62
NEK9-206ENST00000555537 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
NEK9-206ENST00000555537 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
NEK9-206ENST00000555537 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
NEK9-206ENST00000555537 TMX4Q9H1E5 349 aaPredicted RBP11.16□□□□□ -0.62
NEK9-206ENST00000555537 CNOT7Q9UIV1 285 aaKnown RBP11.16□□□□□ -0.62
NEK9-206ENST00000555537 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
NEK9-206ENST00000555537 ABCC4O15439 1325 aa11.15□□□□□ -0.62
NEK9-206ENST00000555537 YDJCA8MPS7 323 aa11.15□□□□□ -0.62
NEK9-206ENST00000555537 NOGQ13253 232 aa11.15□□□□□ -0.62
NEK9-206ENST00000555537 DPP8Q6V1X1 898 aaPredicted RBP11.15□□□□□ -0.62
NEK9-206ENST00000555537 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
NEK9-206ENST00000555537 ZNF428Q96B54 188 aa11.15□□□□□ -0.62
NEK9-206ENST00000555537 NUDCQ9Y266 331 aa11.15□□□□□ -0.62
NEK9-206ENST00000555537 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
NEK9-206ENST00000555537 TRPA1O75762 1119 aa11.14□□□□□ -0.63
NEK9-206ENST00000555537 EIF4A1P60842 406 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms