RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 TNRC6CQ9HCJ0 1690 aaKnown RBP25.27■■□□□ 1.64
CBLN3-202ENST00000555436 HOXA10P31260 410 aaPredicted RBP25.27■■□□□ 1.64
CBLN3-202ENST00000555436 C16orf71Q8IYS4 520 aaPredicted RBP25.26■■□□□ 1.63
CBLN3-202ENST00000555436 RBM46Q8TBY0 533 aaKnown RBP25.26■■□□□ 1.63
CBLN3-202ENST00000555436 RPGRQ92834 1020 aaKnown RBP25.26■■□□□ 1.63
CBLN3-202ENST00000555436 TCIRG1Q13488 830 aa25.25■■□□□ 1.63
CBLN3-202ENST00000555436 SLC10A5Q5PT55 438 aa25.25■■□□□ 1.63
CBLN3-202ENST00000555436 RTKN2Q8IZC4 609 aa25.25■■□□□ 1.63
CBLN3-202ENST00000555436 MRS2Q9HD23 443 aa25.25■■□□□ 1.63
CBLN3-202ENST00000555436 HYPKQ9NX55 129 aa25.25■■□□□ 1.63
CBLN3-202ENST00000555436 RNF123Q5XPI4 1314 aa25.25■■□□□ 1.63
CBLN3-202ENST00000555436 DPY19L2Q6NUT2 758 aa25.24■■□□□ 1.63
CBLN3-202ENST00000555436 OLFM4Q6UX06 510 aa25.24■■□□□ 1.63
CBLN3-202ENST00000555436 NLRP10Q86W26 655 aa25.24■■□□□ 1.63
CBLN3-202ENST00000555436 PLBD2Q8NHP8 589 aa25.24■■□□□ 1.63
CBLN3-202ENST00000555436 FKBP4Q02790 459 aaKnown RBP eCLIP25.23■■□□□ 1.63
CBLN3-202ENST00000555436 CCDC27Q2M243 656 aa25.23■■□□□ 1.63
CBLN3-202ENST00000555436 C3orf67Q6ZVT6 689 aa25.23■■□□□ 1.63
CBLN3-202ENST00000555436 TIAM2Q8IVF5 1701 aa25.23■■□□□ 1.63
CBLN3-202ENST00000555436 VEGFAP15692 232 aaPredicted RBP25.22■■□□□ 1.63
CBLN3-202ENST00000555436 ANKRD13DQ6ZTN6 518 aa25.22■■□□□ 1.63
CBLN3-202ENST00000555436 RBM17Q96I25 401 aaKnown RBP25.22■■□□□ 1.63
CBLN3-202ENST00000555436 NLRP3Q96P20 1036 aa25.22■■□□□ 1.63
CBLN3-202ENST00000555436 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
CBLN3-202ENST00000555436 CACNA1SQ13698 1873 aa25.21■■□□□ 1.63
CBLN3-202ENST00000555436 ELL2O00472 640 aaPredicted RBP25.2■■□□□ 1.62
CBLN3-202ENST00000555436 CC2D2BQ6DHV5 1058 aa25.2■■□□□ 1.62
CBLN3-202ENST00000555436 CEP350Q5VT06 3117 aa25.2■■□□□ 1.62
CBLN3-202ENST00000555436 FSTL1Q12841 308 aa25.19■■□□□ 1.62
CBLN3-202ENST00000555436 NCBP3Q53F19 620 aaKnown RBP25.19■■□□□ 1.62
CBLN3-202ENST00000555436 WWC1Q8IX03 1113 aa25.19■■□□□ 1.62
CBLN3-202ENST00000555436 C8orf58Q8NAV2 365 aa25.19■■□□□ 1.62
CBLN3-202ENST00000555436 ZNF277Q9NRM2 450 aaPredicted RBP25.19■■□□□ 1.62
CBLN3-202ENST00000555436 TRMT112Q9UI30 125 aaKnown RBP25.19■■□□□ 1.62
CBLN3-202ENST00000555436 CCDC88AQ3V6T2 1871 aa25.19■■□□□ 1.62
CBLN3-202ENST00000555436 SNED1Q8TER0 1413 aa25.19■■□□□ 1.62
CBLN3-202ENST00000555436 SH3TC1Q8TE82 1336 aa25.18■■□□□ 1.62
CBLN3-202ENST00000555436 GRIPAP1Q4V328 841 aa25.17■■□□□ 1.62
CBLN3-202ENST00000555436 PSMD1Q99460 953 aa25.17■■□□□ 1.62
CBLN3-202ENST00000555436 ISCA1Q9BUE6 129 aa25.17■■□□□ 1.62
CBLN3-202ENST00000555436 CHMP4AQ9BY43 222 aa25.17■■□□□ 1.62
CBLN3-202ENST00000555436 DICER1Q9UPY3 1922 aaKnown RBP25.16■■□□□ 1.62
CBLN3-202ENST00000555436 POTECB2RU33 542 aa25.16■■□□□ 1.62
CBLN3-202ENST00000555436 HCLS1P14317 486 aaPredicted RBP25.16■■□□□ 1.62
CBLN3-202ENST00000555436 SYNE4Q8N205 404 aa25.16■■□□□ 1.62
CBLN3-202ENST00000555436 ANKRD36CQ5JPF3 1778 aa25.16■■□□□ 1.62
CBLN3-202ENST00000555436 PPEF1O14829 653 aaPredicted RBP25.15■■□□□ 1.62
CBLN3-202ENST00000555436 APLP1P51693 650 aa25.15■■□□□ 1.62
CBLN3-202ENST00000555436 SMC1BQ8NDV3 1235 aa25.15■■□□□ 1.62
CBLN3-202ENST00000555436 DDNO94850 711 aaPredicted RBP25.14■■□□□ 1.62
CBLN3-202ENST00000555436 IARSP41252 1262 aaKnown RBP25.14■■□□□ 1.62
CBLN3-202ENST00000555436 CCDC30Q5VVM6 783 aa25.14■■□□□ 1.62
CBLN3-202ENST00000555436 TSR2Q969E8 191 aaKnown RBP25.14■■□□□ 1.62
CBLN3-202ENST00000555436 PHAXQ9H814 394 aaKnown RBP25.14■■□□□ 1.62
CBLN3-202ENST00000555436 IL16Q14005 1332 aa25.13■■□□□ 1.61
CBLN3-202ENST00000555436 WDR90Q96KV7 1748 aa25.13■■□□□ 1.61
CBLN3-202ENST00000555436 ATP5J2-PTCD1G3V325 749 aa25.13■■□□□ 1.61
CBLN3-202ENST00000555436 GOLGA2Q08379 1002 aa25.13■■□□□ 1.61
CBLN3-202ENST00000555436 TRIM28Q13263 835 aaKnown RBP25.13■■□□□ 1.61
CBLN3-202ENST00000555436 TSPYL6Q8N831 410 aa25.13■■□□□ 1.61
CBLN3-202ENST00000555436 ABCC4O15439 1325 aa25.12■■□□□ 1.61
CBLN3-202ENST00000555436 RIC3Q7Z5B4 369 aa25.12■■□□□ 1.61
CBLN3-202ENST00000555436 TCERG1O14776 1098 aaKnown RBP25.11■■□□□ 1.61
CBLN3-202ENST00000555436 ZNF428Q96B54 188 aa25.11■■□□□ 1.61
CBLN3-202ENST00000555436 ATP6V0A2Q9Y487 856 aa25.11■■□□□ 1.61
CBLN3-202ENST00000555436 BBOX1O75936 387 aa25.1■■□□□ 1.61
CBLN3-202ENST00000555436 SLC51AQ86UW1 340 aa25.1■■□□□ 1.61
CBLN3-202ENST00000555436 FAM89AQ96GI7 184 aa25.1■■□□□ 1.61
CBLN3-202ENST00000555436 L3MBTL3Q96JM7 780 aaPredicted RBP25.1■■□□□ 1.61
CBLN3-202ENST00000555436 TMX4Q9H1E5 349 aaPredicted RBP25.1■■□□□ 1.61
CBLN3-202ENST00000555436 FZD9O00144 591 aa25.09■■□□□ 1.61
CBLN3-202ENST00000555436 DDX46Q7L014 1031 aaKnown RBP25.09■■□□□ 1.61
CBLN3-202ENST00000555436 ZNF541Q9H0D2 1346 aa25.09■■□□□ 1.61
CBLN3-202ENST00000555436 JDP2Q8WYK2 163 aa25.08■■□□□ 1.61
CBLN3-202ENST00000555436 IQCA1LA6NCM1 817 aa25.06■■□□□ 1.6
CBLN3-202ENST00000555436 DDX58O95786 925 aaKnown RBP25.06■■□□□ 1.6
CBLN3-202ENST00000555436 GRAPQ13588 217 aa25.06■■□□□ 1.6
CBLN3-202ENST00000555436 TWISTNBQ3B726 338 aaPredicted RBP25.06■■□□□ 1.6
CBLN3-202ENST00000555436 SP8Q8IXZ3 490 aa25.06■■□□□ 1.6
CBLN3-202ENST00000555436 GRAPLQ8TC17 118 aaPredicted RBP25.06■■□□□ 1.6
CBLN3-202ENST00000555436 SF3B3Q15393 1217 aaKnown RBP25.05■■□□□ 1.6
CBLN3-202ENST00000555436 WDR63Q8IWG1 891 aa25.05■■□□□ 1.6
CBLN3-202ENST00000555436 MYD88Q99836 296 aa25.05■■□□□ 1.6
CBLN3-202ENST00000555436 STK31Q9BXU1 1019 aa25.05■■□□□ 1.6
CBLN3-202ENST00000555436 IRS4O14654 1257 aaPredicted RBP25.04■■□□□ 1.6
CBLN3-202ENST00000555436 RTL5Q5HYW3 569 aaPredicted RBP25.04■■□□□ 1.6
CBLN3-202ENST00000555436 LARGE2Q8N3Y3 721 aa25.04■■□□□ 1.6
CBLN3-202ENST00000555436 ZBTB38Q8NAP3 1195 aaPredicted RBP25.04■■□□□ 1.6
CBLN3-202ENST00000555436 CCDC191Q8NCU4 936 aa25.04■■□□□ 1.6
CBLN3-202ENST00000555436 METTL22Q9BUU2 404 aaPredicted RBP25.04■■□□□ 1.6
CBLN3-202ENST00000555436 SALL2Q9Y467 1007 aaPredicted RBP25.04■■□□□ 1.6
CBLN3-202ENST00000555436 TMC4Q7Z404 712 aa25.03■■□□□ 1.6
CBLN3-202ENST00000555436 DNAJC5GQ8N7S2 189 aa25.03■■□□□ 1.6
CBLN3-202ENST00000555436 RTFDC1Q9BY42 306 aaPredicted RBP25.03■■□□□ 1.6
CBLN3-202ENST00000555436 VPS33BQ9H267 617 aa25.03■■□□□ 1.6
CBLN3-202ENST00000555436 FANCIQ9NVI1 1328 aa25.03■■□□□ 1.6
CBLN3-202ENST00000555436 LAMB2P55268 1798 aa25.03■■□□□ 1.6
CBLN3-202ENST00000555436 COL4A5P29400 1685 aa25.02■■□□□ 1.6
CBLN3-202ENST00000555436 FAM9BQ8IZU0 186 aa25.02■■□□□ 1.6
CBLN3-202ENST00000555436 GPC2Q8N158 579 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms