RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
PSEN1-213ENST00000555386 NLGN2Q8NFZ4 835 aa12.52□□□□□ -0.41
PSEN1-213ENST00000555386 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-213ENST00000555386 BCAR3O75815 825 aa12.51□□□□□ -0.41
PSEN1-213ENST00000555386 RARSP54136 660 aaKnown RBP12.51□□□□□ -0.41
PSEN1-213ENST00000555386 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
PSEN1-213ENST00000555386 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
PSEN1-213ENST00000555386 JARID2Q92833 1246 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-213ENST00000555386 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
PSEN1-213ENST00000555386 ADCY9O60503 1353 aa12.5□□□□□ -0.41
PSEN1-213ENST00000555386 ST5P78524 1137 aa12.5□□□□□ -0.41
PSEN1-213ENST00000555386 PRR5LQ6MZQ0 368 aa12.5□□□□□ -0.41
PSEN1-213ENST00000555386 ZNF34Q8IZ26 560 aa12.5□□□□□ -0.41
PSEN1-213ENST00000555386 SYT17Q9BSW7 474 aa12.5□□□□□ -0.41
PSEN1-213ENST00000555386 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
PSEN1-213ENST00000555386 ATP10DQ9P241 1426 aa12.5□□□□□ -0.41
PSEN1-213ENST00000555386 A0A0G2JLW4 131 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 CT47B1P0C2W7 299 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-213ENST00000555386 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 ALDH1L2Q3SY69 923 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 ERFEQ4G0M1 354 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 PPP1R42Q7Z4L9 355 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 DNAAF4Q8WXU2 420 aa12.49□□□□□ -0.41
PSEN1-213ENST00000555386 METTL22Q9BUU2 404 aaPredicted RBP12.49□□□□□ -0.41
PSEN1-213ENST00000555386 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
PSEN1-213ENST00000555386 CHRNA5P30532 468 aa12.48□□□□□ -0.41
PSEN1-213ENST00000555386 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
PSEN1-213ENST00000555386 PARP10Q53GL7 1025 aa12.48□□□□□ -0.41
PSEN1-213ENST00000555386 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
PSEN1-213ENST00000555386 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
PSEN1-213ENST00000555386 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
PSEN1-213ENST00000555386 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
PSEN1-213ENST00000555386 ANKRD31Q8N7Z5 1873 aa12.48□□□□□ -0.41
PSEN1-213ENST00000555386 ISCA1Q9BUE6 129 aa12.47□□□□□ -0.41
PSEN1-213ENST00000555386 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
PSEN1-213ENST00000555386 CD2APQ9Y5K6 639 aa12.47□□□□□ -0.41
PSEN1-213ENST00000555386 NRXN2Q9P2S2 1712 aa12.47□□□□□ -0.41
PSEN1-213ENST00000555386 KIF13BQ9NQT8 1826 aa12.47□□□□□ -0.41
PSEN1-213ENST00000555386 C10orf71Q711Q0 1435 aa12.47□□□□□ -0.41
PSEN1-213ENST00000555386 NTSR2O95665 410 aa12.46□□□□□ -0.41
PSEN1-213ENST00000555386 IGKV5-2P06315 115 aa12.46□□□□□ -0.41
PSEN1-213ENST00000555386 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-213ENST00000555386 DPEP1P16444 411 aa12.46□□□□□ -0.41
PSEN1-213ENST00000555386 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
PSEN1-213ENST00000555386 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
PSEN1-213ENST00000555386 CWC25Q9NXE8 425 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-213ENST00000555386 ABCC12Q96J65 1359 aa12.46□□□□□ -0.41
PSEN1-213ENST00000555386 NEURL1BA8MQ27 555 aa12.46□□□□□ -0.42
PSEN1-213ENST00000555386 RGL2O15211 777 aa12.46□□□□□ -0.42
PSEN1-213ENST00000555386 TNNQ9UQP3 1299 aa12.46□□□□□ -0.42
PSEN1-213ENST00000555386 PTPRCP08575 1304 aa12.45□□□□□ -0.42
PSEN1-213ENST00000555386 CCDC191Q8NCU4 936 aa12.45□□□□□ -0.42
PSEN1-213ENST00000555386 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
PSEN1-213ENST00000555386 BRIP1Q9BX63 1249 aa12.45□□□□□ -0.42
PSEN1-213ENST00000555386 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
PSEN1-213ENST00000555386 TNRC6CQ9HCJ0 1690 aaKnown RBP12.44□□□□□ -0.42
PSEN1-213ENST00000555386 COL11A2P13942 1736 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-213ENST00000555386 H0YIN7 160 aa12.44□□□□□ -0.42
PSEN1-213ENST00000555386 PDE6BP35913 854 aa12.44□□□□□ -0.42
PSEN1-213ENST00000555386 GPR162Q16538 588 aa12.44□□□□□ -0.42
PSEN1-213ENST00000555386 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
PSEN1-213ENST00000555386 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
PSEN1-213ENST00000555386 PXDNLA1KZ92 1463 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 TAF1P21675 1872 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 TGFB2P61812 414 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 BEND3Q5T5X7 828 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 LINS1Q8NG48 757 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 CCDC85AQ96PX6 553 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-213ENST00000555386 SRCIN1Q9C0H9 1055 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 BCS1LQ9Y276 419 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
PSEN1-213ENST00000555386 LAMB2P55268 1798 aa12.42□□□□□ -0.42
PSEN1-213ENST00000555386 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
PSEN1-213ENST00000555386 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
PSEN1-213ENST00000555386 PLIN1O60240 522 aa12.42□□□□□ -0.42
PSEN1-213ENST00000555386 TRIM28Q13263 835 aaKnown RBP12.42□□□□□ -0.42
PSEN1-213ENST00000555386 GCKRQ14397 625 aa12.42□□□□□ -0.42
PSEN1-213ENST00000555386 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
PSEN1-213ENST00000555386 ZBTB38Q8NAP3 1195 aaPredicted RBP12.42□□□□□ -0.42
PSEN1-213ENST00000555386 EXOC6Q8TAG9 804 aa12.42□□□□□ -0.42
PSEN1-213ENST00000555386 ANP32EQ9BTT0 268 aa12.42□□□□□ -0.42
PSEN1-213ENST00000555386 API5Q9BZZ5 524 aaKnown RBP12.42□□□□□ -0.42
PSEN1-213ENST00000555386 C9orf78Q9NZ63 289 aaPredicted RBP12.42□□□□□ -0.42
PSEN1-213ENST00000555386 DDX60Q8IY21 1712 aaKnown RBP12.41□□□□□ -0.42
PSEN1-213ENST00000555386 ZKSCAN2Q63HK3 967 aa12.41□□□□□ -0.42
PSEN1-213ENST00000555386 RPGRQ92834 1020 aaKnown RBP12.41□□□□□ -0.42
PSEN1-213ENST00000555386 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
PSEN1-213ENST00000555386 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
PSEN1-213ENST00000555386 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
PSEN1-213ENST00000555386 IBTKQ9P2D0 1353 aaPredicted RBP12.41□□□□□ -0.42
PSEN1-213ENST00000555386 MYH3P11055 1940 aa12.41□□□□□ -0.42
PSEN1-213ENST00000555386 PCCAP05165 728 aaPredicted RBP12.4□□□□□ -0.42
PSEN1-213ENST00000555386 TRIM27P14373 513 aa12.4□□□□□ -0.42
PSEN1-213ENST00000555386 KCNA3P22001 575 aa12.4□□□□□ -0.42
PSEN1-213ENST00000555386 ATF7IPQ6VMQ6 1270 aa12.4□□□□□ -0.42
PSEN1-213ENST00000555386 FTSJ3Q8IY81 847 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms