RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ARFGEF2Q9Y6D5 1785 aa16.08■□□□□ 0.16
SYNE2-219ENST00000555323 NTSR2O95665 410 aa16.07■□□□□ 0.16
SYNE2-219ENST00000555323 MS4A1P11836 297 aa16.07■□□□□ 0.16
SYNE2-219ENST00000555323 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
SYNE2-219ENST00000555323 NBPF5PQ86XG9 351 aaPredicted RBP16.07■□□□□ 0.16
SYNE2-219ENST00000555323 ZBTB38Q8NAP3 1195 aaPredicted RBP16.07■□□□□ 0.16
SYNE2-219ENST00000555323 PXDNLA1KZ92 1463 aa16.07■□□□□ 0.16
SYNE2-219ENST00000555323 H7C1W4 665 aa16.06■□□□□ 0.16
SYNE2-219ENST00000555323 PDE3AQ14432 1141 aa16.06■□□□□ 0.16
SYNE2-219ENST00000555323 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
SYNE2-219ENST00000555323 TNNQ9UQP3 1299 aa16.06■□□□□ 0.16
SYNE2-219ENST00000555323 UTYO14607 1347 aa16.05■□□□□ 0.16
SYNE2-219ENST00000555323 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
SYNE2-219ENST00000555323 CNBD1Q8NA66 436 aa16.05■□□□□ 0.16
SYNE2-219ENST00000555323 TRMT112Q9UI30 125 aaKnown RBP16.05■□□□□ 0.16
SYNE2-219ENST00000555323 NRXN2Q9P2S2 1712 aa16.05■□□□□ 0.16
SYNE2-219ENST00000555323 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 PLIN1O60240 522 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 RLBP1P12271 317 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 CASP7P55210 303 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 BRIP1Q9BX63 1249 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 USP44Q9H0E7 712 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
SYNE2-219ENST00000555323 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
SYNE2-219ENST00000555323 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
SYNE2-219ENST00000555323 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
SYNE2-219ENST00000555323 GRM8O00222 908 aa16.03■□□□□ 0.16
SYNE2-219ENST00000555323 RRP1P56182 461 aaKnown RBP16.03■□□□□ 0.16
SYNE2-219ENST00000555323 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
SYNE2-219ENST00000555323 NUTM1Q86Y26 1132 aa16.03■□□□□ 0.16
SYNE2-219ENST00000555323 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
SYNE2-219ENST00000555323 FAM89AQ96GI7 184 aa16.03■□□□□ 0.16
SYNE2-219ENST00000555323 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.16
SYNE2-219ENST00000555323 HSP90B1P14625 803 aaKnown RBP16.02■□□□□ 0.16
SYNE2-219ENST00000555323 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
SYNE2-219ENST00000555323 ST5P78524 1137 aa16.02■□□□□ 0.16
SYNE2-219ENST00000555323 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
SYNE2-219ENST00000555323 SYNE4Q8N205 404 aa16.02■□□□□ 0.16
SYNE2-219ENST00000555323 RIC1Q4ADV7 1423 aa16.02■□□□□ 0.15
SYNE2-219ENST00000555323 TGFB2P61812 414 aa16.01■□□□□ 0.15
SYNE2-219ENST00000555323 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
SYNE2-219ENST00000555323 C9orf78Q9NZ63 289 aaPredicted RBP16.01■□□□□ 0.15
SYNE2-219ENST00000555323 PDZRN3Q9UPQ7 1066 aa16.01■□□□□ 0.15
SYNE2-219ENST00000555323 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
SYNE2-219ENST00000555323 C10orf71Q711Q0 1435 aa16.01■□□□□ 0.15
SYNE2-219ENST00000555323 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
SYNE2-219ENST00000555323 ZBTB7BO15156 539 aaPredicted RBP16■□□□□ 0.15
SYNE2-219ENST00000555323 NPHP1O15259 732 aa16■□□□□ 0.15
SYNE2-219ENST00000555323 NBPF7P0C2Y1 421 aaPredicted RBP16■□□□□ 0.15
SYNE2-219ENST00000555323 PDE6BP35913 854 aa16■□□□□ 0.15
SYNE2-219ENST00000555323 PANK1Q8TE04 598 aa16■□□□□ 0.15
SYNE2-219ENST00000555323 AFDNP55196 1824 aaKnown RBP16■□□□□ 0.15
SYNE2-219ENST00000555323 PDE8AO60658 829 aa15.99■□□□□ 0.15
SYNE2-219ENST00000555323 SF3B3Q15393 1217 aaKnown RBP15.99■□□□□ 0.15
SYNE2-219ENST00000555323 CRY2Q49AN0 593 aa15.99■□□□□ 0.15
SYNE2-219ENST00000555323 C20orf194Q5TEA3 1177 aa15.99■□□□□ 0.15
SYNE2-219ENST00000555323 UBE3BQ7Z3V4 1068 aa15.99■□□□□ 0.15
SYNE2-219ENST00000555323 CCDC24Q8N4L8 307 aa15.99■□□□□ 0.15
SYNE2-219ENST00000555323 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
SYNE2-219ENST00000555323 ABCC12Q96J65 1359 aa15.99■□□□□ 0.15
SYNE2-219ENST00000555323 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
SYNE2-219ENST00000555323 HCLS1P14317 486 aaPredicted RBP15.98■□□□□ 0.15
SYNE2-219ENST00000555323 MVPQ14764 893 aaKnown RBP15.98■□□□□ 0.15
SYNE2-219ENST00000555323 RTL5Q5HYW3 569 aaPredicted RBP15.98■□□□□ 0.15
SYNE2-219ENST00000555323 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
SYNE2-219ENST00000555323 HDAC5Q9UQL6 1122 aa15.98■□□□□ 0.15
SYNE2-219ENST00000555323 LRP5O75197 1615 aa15.97■□□□□ 0.15
SYNE2-219ENST00000555323 CSF1RP07333 972 aa15.97■□□□□ 0.15
SYNE2-219ENST00000555323 GNAI3P08754 354 aa15.97■□□□□ 0.15
SYNE2-219ENST00000555323 KAZALD1Q96I82 304 aa15.97■□□□□ 0.15
SYNE2-219ENST00000555323 MEIS3Q99687 375 aa15.97■□□□□ 0.15
SYNE2-219ENST00000555323 SYT17Q9BSW7 474 aa15.97■□□□□ 0.15
SYNE2-219ENST00000555323 FHDC1Q9C0D6 1143 aaPredicted RBP15.97■□□□□ 0.15
SYNE2-219ENST00000555323 PPP1R1BQ9UD71 204 aaPredicted RBP15.97■□□□□ 0.15
SYNE2-219ENST00000555323 SRGNP10124 158 aa15.96■□□□□ 0.15
SYNE2-219ENST00000555323 KCNA3P22001 575 aa15.96■□□□□ 0.15
SYNE2-219ENST00000555323 HOXA10P31260 410 aaPredicted RBP15.96■□□□□ 0.15
SYNE2-219ENST00000555323 FOXO4P98177 505 aa15.96■□□□□ 0.15
SYNE2-219ENST00000555323 ITPRIPQ8IWB1 547 aa15.96■□□□□ 0.15
SYNE2-219ENST00000555323 DDX19BQ9UMR2 479 aa15.96■□□□□ 0.15
SYNE2-219ENST00000555323 COG6Q9Y2V7 657 aa15.96■□□□□ 0.15
SYNE2-219ENST00000555323 N4BP2Q86UW6 1770 aaPredicted RBP15.95■□□□□ 0.14
SYNE2-219ENST00000555323 H0YIN7 160 aa15.95■□□□□ 0.14
SYNE2-219ENST00000555323 UBTFL1P0CB47 393 aaPredicted RBP15.95■□□□□ 0.14
SYNE2-219ENST00000555323 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
SYNE2-219ENST00000555323 C3orf67Q6ZVT6 689 aa15.95■□□□□ 0.14
SYNE2-219ENST00000555323 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
SYNE2-219ENST00000555323 CHMP4BQ9H444 224 aaKnown RBP15.95■□□□□ 0.14
SYNE2-219ENST00000555323 KIF13BQ9NQT8 1826 aa15.95■□□□□ 0.14
SYNE2-219ENST00000555323 EPHA10Q5JZY3 1008 aa15.94■□□□□ 0.14
SYNE2-219ENST00000555323 C2CD5Q86YS7 1000 aa15.94■□□□□ 0.14
SYNE2-219ENST00000555323 MASTLQ96GX5 879 aa15.94■□□□□ 0.14
SYNE2-219ENST00000555323 SUCLG2Q96I99 432 aa15.94■□□□□ 0.14
SYNE2-219ENST00000555323 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
SYNE2-219ENST00000555323 NPR1P16066 1061 aa15.93■□□□□ 0.14
SYNE2-219ENST00000555323 DPEP1P16444 411 aa15.93■□□□□ 0.14
SYNE2-219ENST00000555323 CTSWP56202 376 aa15.93■□□□□ 0.14
SYNE2-219ENST00000555323 STYK1Q6J9G0 422 aa15.93■□□□□ 0.14
SYNE2-219ENST00000555323 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms