RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CWF19L2Q2TBE0 894 aaKnown RBP18.08■□□□□ 0.48
CHD8-208ENST00000555301 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.48
CHD8-208ENST00000555301 CNBD1Q8NA66 436 aa18.08■□□□□ 0.48
CHD8-208ENST00000555301 NTSR2O95665 410 aa18.07■□□□□ 0.48
CHD8-208ENST00000555301 ST5P78524 1137 aa18.07■□□□□ 0.48
CHD8-208ENST00000555301 DZIP1LQ8IYY4 767 aaKnown RBP18.07■□□□□ 0.48
CHD8-208ENST00000555301 TRMT112Q9UI30 125 aaKnown RBP18.07■□□□□ 0.48
CHD8-208ENST00000555301 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
CHD8-208ENST00000555301 SH3TC1Q8TE82 1336 aa18.06■□□□□ 0.48
CHD8-208ENST00000555301 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
CHD8-208ENST00000555301 GCKRQ14397 625 aa18.06■□□□□ 0.48
CHD8-208ENST00000555301 INTS3Q68E01 1043 aaKnown RBP18.06■□□□□ 0.48
CHD8-208ENST00000555301 PRR5LQ6MZQ0 368 aa18.06■□□□□ 0.48
CHD8-208ENST00000555301 ZBTB38Q8NAP3 1195 aaPredicted RBP18.06■□□□□ 0.48
CHD8-208ENST00000555301 CLUAP1Q96AJ1 413 aa18.06■□□□□ 0.48
CHD8-208ENST00000555301 COL24A1Q17RW2 1714 aa18.05■□□□□ 0.48
CHD8-208ENST00000555301 PLIN1O60240 522 aa18.04■□□□□ 0.48
CHD8-208ENST00000555301 PCCAP05165 728 aaPredicted RBP18.04■□□□□ 0.48
CHD8-208ENST00000555301 HSP90B1P14625 803 aaKnown RBP18.04■□□□□ 0.48
CHD8-208ENST00000555301 RRP1P56182 461 aaKnown RBP18.04■□□□□ 0.48
CHD8-208ENST00000555301 NUTM1Q86Y26 1132 aa18.04■□□□□ 0.48
CHD8-208ENST00000555301 PPP1R1BQ9UD71 204 aaPredicted RBP18.04■□□□□ 0.48
CHD8-208ENST00000555301 TNNQ9UQP3 1299 aa18.04■□□□□ 0.48
CHD8-208ENST00000555301 NUP98P52948 1817 aa18.04■□□□□ 0.48
CHD8-208ENST00000555301 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
CHD8-208ENST00000555301 ERFEQ4G0M1 354 aa18.03■□□□□ 0.48
CHD8-208ENST00000555301 FAM89AQ96GI7 184 aa18.03■□□□□ 0.48
CHD8-208ENST00000555301 BRIP1Q9BX63 1249 aa18.03■□□□□ 0.48
CHD8-208ENST00000555301 C9orf78Q9NZ63 289 aaPredicted RBP18.03■□□□□ 0.48
CHD8-208ENST00000555301 H7C1W4 665 aa18.02■□□□□ 0.48
CHD8-208ENST00000555301 GRM8O00222 908 aa18.02■□□□□ 0.48
CHD8-208ENST00000555301 SLC10A5Q5PT55 438 aa18.02■□□□□ 0.48
CHD8-208ENST00000555301 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
CHD8-208ENST00000555301 CD2APQ9Y5K6 639 aa18.02■□□□□ 0.48
CHD8-208ENST00000555301 CDHR2Q9BYE9 1310 aa18.01■□□□□ 0.47
CHD8-208ENST00000555301 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
CHD8-208ENST00000555301 PDZRN3Q9UPQ7 1066 aa18.01■□□□□ 0.47
CHD8-208ENST00000555301 ANKRD36CQ5JPF3 1778 aa18.01■□□□□ 0.47
CHD8-208ENST00000555301 RIC1Q4ADV7 1423 aa18■□□□□ 0.47
CHD8-208ENST00000555301 IRS4O14654 1257 aaPredicted RBP18■□□□□ 0.47
CHD8-208ENST00000555301 RLBP1P12271 317 aa18■□□□□ 0.47
CHD8-208ENST00000555301 PDE6BP35913 854 aa18■□□□□ 0.47
CHD8-208ENST00000555301 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
CHD8-208ENST00000555301 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
CHD8-208ENST00000555301 ITPRIPQ8IWB1 547 aa18■□□□□ 0.47
CHD8-208ENST00000555301 CCDC24Q8N4L8 307 aa18■□□□□ 0.47
CHD8-208ENST00000555301 PANK1Q8TE04 598 aa18■□□□□ 0.47
CHD8-208ENST00000555301 NLRP3Q96P20 1036 aa18■□□□□ 0.47
CHD8-208ENST00000555301 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
CHD8-208ENST00000555301 UTYO14607 1347 aa17.99■□□□□ 0.47
CHD8-208ENST00000555301 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
CHD8-208ENST00000555301 TGFB2P61812 414 aa17.99■□□□□ 0.47
CHD8-208ENST00000555301 USP44Q9H0E7 712 aa17.99■□□□□ 0.47
CHD8-208ENST00000555301 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
CHD8-208ENST00000555301 ABCC12Q96J65 1359 aa17.99■□□□□ 0.47
CHD8-208ENST00000555301 GNAI3P08754 354 aa17.98■□□□□ 0.47
CHD8-208ENST00000555301 HCLS1P14317 486 aaPredicted RBP17.98■□□□□ 0.47
CHD8-208ENST00000555301 CASP7P55210 303 aa17.98■□□□□ 0.47
CHD8-208ENST00000555301 SYNE4Q8N205 404 aa17.98■□□□□ 0.47
CHD8-208ENST00000555301 KLHL34Q8N239 644 aa17.98■□□□□ 0.47
CHD8-208ENST00000555301 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
CHD8-208ENST00000555301 KLRG2A4D1S0 409 aaPredicted RBP17.97■□□□□ 0.47
CHD8-208ENST00000555301 PDE8AO60658 829 aa17.97■□□□□ 0.47
CHD8-208ENST00000555301 NBPF7P0C2Y1 421 aaPredicted RBP17.97■□□□□ 0.47
CHD8-208ENST00000555301 MVPQ14764 893 aaKnown RBP17.97■□□□□ 0.47
CHD8-208ENST00000555301 PLA2G12BQ9BX93 195 aa17.97■□□□□ 0.47
CHD8-208ENST00000555301 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
CHD8-208ENST00000555301 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
CHD8-208ENST00000555301 DDX19BQ9UMR2 479 aa17.97■□□□□ 0.47
CHD8-208ENST00000555301 LRP5O75197 1615 aa17.97■□□□□ 0.47
CHD8-208ENST00000555301 UBTFL1P0CB47 393 aaPredicted RBP17.96■□□□□ 0.47
CHD8-208ENST00000555301 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
CHD8-208ENST00000555301 COG6Q9Y2V7 657 aa17.96■□□□□ 0.47
CHD8-208ENST00000555301 H0YIN7 160 aa17.95■□□□□ 0.46
CHD8-208ENST00000555301 CRY2Q49AN0 593 aa17.95■□□□□ 0.46
CHD8-208ENST00000555301 MEIS3Q99687 375 aa17.95■□□□□ 0.46
CHD8-208ENST00000555301 ZBTB7BO15156 539 aaPredicted RBP17.94■□□□□ 0.46
CHD8-208ENST00000555301 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
CHD8-208ENST00000555301 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
CHD8-208ENST00000555301 SYT17Q9BSW7 474 aa17.94■□□□□ 0.46
CHD8-208ENST00000555301 SRGNP10124 158 aa17.93■□□□□ 0.46
CHD8-208ENST00000555301 CTSWP56202 376 aa17.93■□□□□ 0.46
CHD8-208ENST00000555301 CCDC152Q4G0S7 254 aa17.93■□□□□ 0.46
CHD8-208ENST00000555301 RPGRQ92834 1020 aaKnown RBP17.93■□□□□ 0.46
CHD8-208ENST00000555301 MASTLQ96GX5 879 aa17.93■□□□□ 0.46
CHD8-208ENST00000555301 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
CHD8-208ENST00000555301 AFDNP55196 1824 aaKnown RBP17.93■□□□□ 0.46
CHD8-208ENST00000555301 NPR1P16066 1061 aa17.92■□□□□ 0.46
CHD8-208ENST00000555301 C3orf67Q6ZVT6 689 aa17.92■□□□□ 0.46
CHD8-208ENST00000555301 A0A0G2JLW4 131 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 GNAI2P04899 355 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 CSF1RP07333 972 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 DPEP1P16444 411 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 CHRNA5P30532 468 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 HOXA10P31260 410 aaPredicted RBP17.91■□□□□ 0.46
CHD8-208ENST00000555301 FOXO4P98177 505 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 STYK1Q6J9G0 422 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 TTLL11Q8NHH1 800 aa17.91■□□□□ 0.46
CHD8-208ENST00000555301 RBM17Q96I25 401 aaKnown RBP17.91■□□□□ 0.46
CHD8-208ENST00000555301 KAZALD1Q96I82 304 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms