RNA–Protein interactions for RNA: ENST00000555188.5

SHE-203, Transcript of Src homology 2 domain containing E, humanhuman

TSL 1 (best)

Gene SHE, Length 6,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-203ENST00000555188 U3KPZ7 1027 aaPredicted RBP9.96□□□□□ -0.81
SHE-203ENST00000555188 SYNJ1O43426 1573 aa9.96□□□□□ -0.81
SHE-203ENST00000555188 ZEB2O60315 1214 aa9.96□□□□□ -0.81
SHE-203ENST00000555188 HMGB1P09429 215 aaKnown RBP9.96□□□□□ -0.81
SHE-203ENST00000555188 DAPK1P53355 1430 aa9.96□□□□□ -0.81
SHE-203ENST00000555188 DNAJC21Q5F1R6 531 aaKnown RBP9.96□□□□□ -0.81
SHE-203ENST00000555188 CCT2P78371 535 aaKnown RBP9.96□□□□□ -0.81
SHE-203ENST00000555188 OAS2P29728 719 aaKnown RBP9.96□□□□□ -0.82
SHE-203ENST00000555188 CACNA2D4Q7Z3S7 1137 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 CERS3Q8IU89 383 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 LMBRD1Q9NUN5 540 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 TUBBP07437 444 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 CCDC57Q2TAC2 916 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 GAS2L3Q86XJ1 694 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 AFAP1L1Q8TED9 768 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 VTI1AQ96AJ9 217 aa9.96□□□□□ -0.82
SHE-203ENST00000555188 INTS4Q96HW7 963 aaKnown RBP9.96□□□□□ -0.82
SHE-203ENST00000555188 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 POTEDQ86YR6 584 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 ESYT1Q9BSJ8 1104 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 ZHX3Q9H4I2 956 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 ZNF408Q9H9D4 720 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 INPP5BP32019 993 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 CABP4P57796 275 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 CTCFLQ8NI51 663 aaPredicted RBP9.95□□□□□ -0.82
SHE-203ENST00000555188 ZNF622Q969S3 477 aaKnown RBP eCLIP9.95□□□□□ -0.82
SHE-203ENST00000555188 BOLA2Q9H3K6 86 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 CNNM1Q9NRU3 951 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 CLNS1AP54105 237 aaKnown RBP9.95□□□□□ -0.82
SHE-203ENST00000555188 KARSQ15046 597 aaKnown RBP9.95□□□□□ -0.82
SHE-203ENST00000555188 LMOD1P29536 600 aaPredicted RBP9.95□□□□□ -0.82
SHE-203ENST00000555188 FKBP4Q02790 459 aaKnown RBP eCLIP9.95□□□□□ -0.82
SHE-203ENST00000555188 CCDC102BQ68D86 513 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 TNNQ9UQP3 1299 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 RLBP1P12271 317 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 HSP90AA4PQ58FG1 418 aa9.95□□□□□ -0.82
SHE-203ENST00000555188 PTCD1O75127 700 aaKnown RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 POLR3DP05423 398 aaPredicted RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 UBE4AQ14139 1066 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 TDRD12Q587J7 1177 aaKnown RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 IFNKQ9P0W0 207 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 MRPS27Q92552 414 aaKnown RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 RPRD2Q5VT52 1461 aaKnown RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 SSBP05455 408 aaKnown RBP eCLIP9.94□□□□□ -0.82
SHE-203ENST00000555188 NPHP3Q7Z494 1330 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 NCAPD3P42695 1498 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 CSPG5O95196 566 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 UTP14AQ9BVJ6 771 aaKnown RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 PRDM11Q9NQV5 511 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 F6X3S4 739 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 USHBP1Q8N6Y0 703 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 ANKS4BQ8N8V4 417 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 CCDC97Q96F63 343 aaPredicted RBP9.94□□□□□ -0.82
SHE-203ENST00000555188 LZTFL1Q9NQ48 299 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 C9orf84Q5VXU9 1444 aa9.94□□□□□ -0.82
SHE-203ENST00000555188 B4GALNT4Q76KP1 1039 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 CARD6Q9BX69 1037 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 N4BP3O15049 544 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 SYKP43405 635 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 MPRIPQ6WCQ1 1025 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 NEK11Q8NG66 645 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 TMEM63CQ9P1W3 806 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 CCDC6Q16204 474 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 WWC2Q6AWC2 1192 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 NSRP1Q9H0G5 558 aaKnown RBP9.93□□□□□ -0.82
SHE-203ENST00000555188 RBM28Q9NW13 759 aaKnown RBP9.93□□□□□ -0.82
SHE-203ENST00000555188 MKRN1Q9UHC7 482 aaKnown RBP9.93□□□□□ -0.82
SHE-203ENST00000555188 ATP6V1AP38606 617 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 ZNF569Q5MCW4 686 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 USP26Q9BXU7 913 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 CABP1Q9NZU7 370 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.93□□□□□ -0.82
SHE-203ENST00000555188 KIF5BP33176 963 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 ZNF75DP51815 510 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 PDE1AP54750 535 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 FBF1Q8TES7 1133 aa9.93□□□□□ -0.82
SHE-203ENST00000555188 MYCP01106 439 aaPredicted RBP9.92□□□□□ -0.82
SHE-203ENST00000555188 ZSCAN25Q6NSZ9 544 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 GSTTP1A0A1W2PQM5 241 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 EP400NLQ6ZTU2 488 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 EVI5LQ96CN4 794 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 BMP2KQ9NSY1 1161 aaPredicted RBP9.92□□□□□ -0.82
SHE-203ENST00000555188 EFCAB5A4FU69 1503 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 UBAC1Q9BSL1 405 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 NDUFAB1O14561 156 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 PPFIA3O75145 1194 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 HSPA2P54652 639 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 MIS18AQ9NYP9 233 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 PARD3Q8TEW0 1356 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 GOLGA8BA8MQT2 603 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 PRAM1Q96QH2 718 aa9.92□□□□□ -0.82
SHE-203ENST00000555188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.91□□□□□ -0.82
SHE-203ENST00000555188 TMCO5BA8MYB1 307 aa9.91□□□□□ -0.82
SHE-203ENST00000555188 CPLX4Q7Z7G2 160 aa9.91□□□□□ -0.82
SHE-203ENST00000555188 ARFGAP2Q8N6H7 521 aa9.91□□□□□ -0.82
SHE-203ENST00000555188 KCNG4Q8TDN1 519 aa9.91□□□□□ -0.82
SHE-203ENST00000555188 CAPZA3Q96KX2 299 aa9.91□□□□□ -0.82
SHE-203ENST00000555188 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms