RNA–Protein interactions for RNA: ENST00000555078.2

RAB42P1-201, Transcript of RAB42, member RAS oncogene family, pseudogene 1, humanhuman

BASIC

Gene RAB42P1, Length 316 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42P1-201ENST00000555078 IFT57Q9NWB7 429 aa16.27■□□□□ 0.2
RAB42P1-201ENST00000555078 C3orf67Q6ZVT6 689 aa16.26■□□□□ 0.19
RAB42P1-201ENST00000555078 C16orf71Q8IYS4 520 aaPredicted RBP16.26■□□□□ 0.19
RAB42P1-201ENST00000555078 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
RAB42P1-201ENST00000555078 GNAI1P63096 354 aa16.25■□□□□ 0.19
RAB42P1-201ENST00000555078 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
RAB42P1-201ENST00000555078 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
RAB42P1-201ENST00000555078 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
RAB42P1-201ENST00000555078 DBF4Q9UBU7 674 aaPredicted RBP16.25■□□□□ 0.19
RAB42P1-201ENST00000555078 SNED1Q8TER0 1413 aa16.25■□□□□ 0.19
RAB42P1-201ENST00000555078 WDR90Q96KV7 1748 aa16.25■□□□□ 0.19
RAB42P1-201ENST00000555078 HOXA10P31260 410 aaPredicted RBP16.24■□□□□ 0.19
RAB42P1-201ENST00000555078 FKBP4Q02790 459 aaKnown RBP eCLIP16.24■□□□□ 0.19
RAB42P1-201ENST00000555078 TCIRG1Q13488 830 aa16.24■□□□□ 0.19
RAB42P1-201ENST00000555078 NLRP10Q86W26 655 aa16.24■□□□□ 0.19
RAB42P1-201ENST00000555078 RPGRQ92834 1020 aaKnown RBP16.24■□□□□ 0.19
RAB42P1-201ENST00000555078 POTECB2RU33 542 aa16.23■□□□□ 0.19
RAB42P1-201ENST00000555078 ANP32CO43423 234 aa16.23■□□□□ 0.19
RAB42P1-201ENST00000555078 SLC10A5Q5PT55 438 aa16.23■□□□□ 0.19
RAB42P1-201ENST00000555078 DPY19L2Q6NUT2 758 aa16.23■□□□□ 0.19
RAB42P1-201ENST00000555078 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
RAB42P1-201ENST00000555078 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
RAB42P1-201ENST00000555078 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 VEGFAP15692 232 aaPredicted RBP16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 MRS2Q9HD23 443 aa16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 ZNF277Q9NRM2 450 aaPredicted RBP16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 HYPKQ9NX55 129 aa16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 LAMB2P55268 1798 aa16.22■□□□□ 0.19
RAB42P1-201ENST00000555078 FSTL1Q12841 308 aa16.21■□□□□ 0.19
RAB42P1-201ENST00000555078 ANKRD13DQ6ZTN6 518 aa16.21■□□□□ 0.19
RAB42P1-201ENST00000555078 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
RAB42P1-201ENST00000555078 C8orf58Q8NAV2 365 aa16.21■□□□□ 0.19
RAB42P1-201ENST00000555078 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
RAB42P1-201ENST00000555078 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
RAB42P1-201ENST00000555078 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
RAB42P1-201ENST00000555078 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
RAB42P1-201ENST00000555078 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 HCLS1P14317 486 aaPredicted RBP16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 APLP1P51693 650 aa16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 CC2D2BQ6DHV5 1058 aa16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 WWC1Q8IX03 1113 aa16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 PSMD1Q99460 953 aa16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 ISCA1Q9BUE6 129 aa16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
RAB42P1-201ENST00000555078 ATP5J2-PTCD1G3V325 749 aa16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 TSPYL6Q8N831 410 aa16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 TSR2Q969E8 191 aaKnown RBP16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 DDX60Q8IY21 1712 aaKnown RBP16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 ABCC4O15439 1325 aa16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 ZNF541Q9H0D2 1346 aa16.18■□□□□ 0.18
RAB42P1-201ENST00000555078 COL4A5P29400 1685 aa16.17■□□□□ 0.18
RAB42P1-201ENST00000555078 GRIPAP1Q4V328 841 aa16.16■□□□□ 0.18
RAB42P1-201ENST00000555078 FZD9O00144 591 aa16.15■□□□□ 0.18
RAB42P1-201ENST00000555078 GOLGA2Q08379 1002 aa16.15■□□□□ 0.18
RAB42P1-201ENST00000555078 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
RAB42P1-201ENST00000555078 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
RAB42P1-201ENST00000555078 RIC3Q7Z5B4 369 aa16.15■□□□□ 0.18
RAB42P1-201ENST00000555078 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
RAB42P1-201ENST00000555078 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
RAB42P1-201ENST00000555078 HTRA3P83110 453 aa16.14■□□□□ 0.17
RAB42P1-201ENST00000555078 TRIM28Q13263 835 aaKnown RBP16.14■□□□□ 0.17
RAB42P1-201ENST00000555078 L3MBTL3Q96JM7 780 aaPredicted RBP16.14■□□□□ 0.17
RAB42P1-201ENST00000555078 IL16Q14005 1332 aa16.14■□□□□ 0.17
RAB42P1-201ENST00000555078 SCN4AP35499 1836 aa16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 BBOX1O75936 387 aa16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 POTEJP0CG39 1038 aa16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 DDX46Q7L014 1031 aaKnown RBP16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 DNAJC5GQ8N7S2 189 aa16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 TAF1P21675 1872 aa16.13■□□□□ 0.17
RAB42P1-201ENST00000555078 GRAPQ13588 217 aa16.12■□□□□ 0.17
RAB42P1-201ENST00000555078 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
RAB42P1-201ENST00000555078 GRAPLQ8TC17 118 aaPredicted RBP16.12■□□□□ 0.17
RAB42P1-201ENST00000555078 JDP2Q8WYK2 163 aa16.12■□□□□ 0.17
RAB42P1-201ENST00000555078 MYD88Q99836 296 aa16.12■□□□□ 0.17
RAB42P1-201ENST00000555078 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
RAB42P1-201ENST00000555078 SALL2Q9Y467 1007 aaPredicted RBP16.12■□□□□ 0.17
RAB42P1-201ENST00000555078 COL4A1P02462 1669 aa16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 CEP350Q5VT06 3117 aa16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 IQCA1LA6NCM1 817 aa16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 SF3B3Q15393 1217 aaKnown RBP16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 LARGE2Q8N3Y3 721 aa16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 TAF1DQ9H5J8 278 aaPredicted RBP16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 LRRC37AA6NMS7 1700 aa16.11■□□□□ 0.17
RAB42P1-201ENST00000555078 IRS4O14654 1257 aaPredicted RBP16.1■□□□□ 0.17
RAB42P1-201ENST00000555078 AOC3Q16853 763 aa16.1■□□□□ 0.17
RAB42P1-201ENST00000555078 GPC2Q8N158 579 aa16.1■□□□□ 0.17
RAB42P1-201ENST00000555078 ZBTB38Q8NAP3 1195 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms