RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 C8orf34Q49A92 452 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 C7orf43Q8WVR3 580 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 SREK1Q8WXA9 508 aaKnown RBP8.54□□□□□ -1.04
PSEN1-211ENST00000554995 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 INSM2Q96T92 566 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-211ENST00000554995 FAM13BQ9NYF5 915 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 ZDHHC3Q9NYG2 299 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 EIF1AYO14602 144 aaKnown RBP8.53□□□□□ -1.04
PSEN1-211ENST00000554995 GNA15P30679 374 aa8.53□□□□□ -1.04
PSEN1-211ENST00000554995 HIF1AQ16665 826 aa8.53□□□□□ -1.04
PSEN1-211ENST00000554995 NBPF1Q3BBV0 1214 aa8.53□□□□□ -1.04
PSEN1-211ENST00000554995 TTC16Q8NEE8 873 aa8.53□□□□□ -1.04
PSEN1-211ENST00000554995 FBF1Q8TES7 1133 aa8.53□□□□□ -1.04
PSEN1-211ENST00000554995 KLRG1Q96E93 195 aa8.53□□□□□ -1.04
PSEN1-211ENST00000554995 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
PSEN1-211ENST00000554995 RPLP1P05386 114 aaKnown RBP8.52□□□□□ -1.05
PSEN1-211ENST00000554995 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.05
PSEN1-211ENST00000554995 PHKA2P46019 1235 aa8.52□□□□□ -1.05
PSEN1-211ENST00000554995 FANCCQ00597 558 aa8.52□□□□□ -1.05
PSEN1-211ENST00000554995 RAD51AP2Q09MP3 1159 aa8.52□□□□□ -1.05
PSEN1-211ENST00000554995 METTL16Q86W50 562 aaKnown RBP8.52□□□□□ -1.05
PSEN1-211ENST00000554995 ZSCAN1Q8NBB4 408 aa8.52□□□□□ -1.05
PSEN1-211ENST00000554995 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
PSEN1-211ENST00000554995 TSEN34Q9BSV6 310 aaKnown RBP8.52□□□□□ -1.05
PSEN1-211ENST00000554995 DMGDHQ9UI17 866 aaKnown RBP8.52□□□□□ -1.05
PSEN1-211ENST00000554995 OPLAHO14841 1288 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 SPINT1O43278 529 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 NEFLP07196 543 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 IER5Q5VY09 327 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 NT5DC4Q86YG4 428 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 ZNF280CQ8ND82 737 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 PIK3R5Q8WYR1 880 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 HPS1Q92902 700 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 DNAJC25Q9H1X3 360 aa8.51□□□□□ -1.05
PSEN1-211ENST00000554995 POLMQ9NP87 494 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-211ENST00000554995 METTL5Q9NRN9 209 aaKnown RBP8.51□□□□□ -1.05
PSEN1-211ENST00000554995 SPATA31C2B4DYI2 1134 aa8.5□□□□□ -1.05
PSEN1-211ENST00000554995 TATP17735 454 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-211ENST00000554995 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-211ENST00000554995 IDH3AP50213 366 aa8.5□□□□□ -1.05
PSEN1-211ENST00000554995 RNF34Q969K3 372 aa8.5□□□□□ -1.05
PSEN1-211ENST00000554995 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-211ENST00000554995 CPNE3O75131 537 aaKnown RBP8.49□□□□□ -1.05
PSEN1-211ENST00000554995 LINC00528Q8N1L1 170 aa8.49□□□□□ -1.05
PSEN1-211ENST00000554995 FRMD6Q96NE9 622 aa8.49□□□□□ -1.05
PSEN1-211ENST00000554995 AK5Q9Y6K8 562 aa8.49□□□□□ -1.05
PSEN1-211ENST00000554995 ATP4AP20648 1035 aa8.48□□□□□ -1.05
PSEN1-211ENST00000554995 ZNF76P36508 570 aa8.48□□□□□ -1.05
PSEN1-211ENST00000554995 BICDL1Q6ZP65 573 aa8.48□□□□□ -1.05
PSEN1-211ENST00000554995 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
PSEN1-211ENST00000554995 USP20Q9Y2K6 914 aa8.48□□□□□ -1.05
PSEN1-211ENST00000554995 INPP5BP32019 993 aa8.47□□□□□ -1.05
PSEN1-211ENST00000554995 ARSDP51689 593 aa8.47□□□□□ -1.05
PSEN1-211ENST00000554995 POU4F2Q12837 409 aa8.47□□□□□ -1.05
PSEN1-211ENST00000554995 NBPF10Q6P3W6 841 aaKnown RBP8.47□□□□□ -1.05
PSEN1-211ENST00000554995 CRELD1Q96HD1 420 aa8.47□□□□□ -1.05
PSEN1-211ENST00000554995 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
PSEN1-211ENST00000554995 FOXD3Q9UJU5 478 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-211ENST00000554995 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
PSEN1-211ENST00000554995 CAPN5O15484 640 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-211ENST00000554995 TNFRSF21O75509 655 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 UPP2O95045 317 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 CTSHP09668 335 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 SF3A1Q15459 793 aaKnown RBP8.46□□□□□ -1.06
PSEN1-211ENST00000554995 TRIP4Q15650 581 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-211ENST00000554995 USPL1Q5W0Q7 1092 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 XKR5Q6UX68 686 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 PRICKLE2Q7Z3G6 844 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 RNF217Q8TC41 542 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 TGIF2Q9GZN2 237 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 ATP13A2Q9NQ11 1180 aa8.46□□□□□ -1.06
PSEN1-211ENST00000554995 EIF4BP23588 611 aaKnown RBP8.45□□□□□ -1.06
PSEN1-211ENST00000554995 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.45□□□□□ -1.06
PSEN1-211ENST00000554995 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
PSEN1-211ENST00000554995 BTLAQ7Z6A9 289 aa8.45□□□□□ -1.06
PSEN1-211ENST00000554995 CMTR1Q8N1G2 835 aaKnown RBP8.45□□□□□ -1.06
PSEN1-211ENST00000554995 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
PSEN1-211ENST00000554995 NEUROD4Q9HD90 331 aa8.45□□□□□ -1.06
PSEN1-211ENST00000554995 PPP1R1BQ9UD71 204 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-211ENST00000554995 FNDC3AQ9Y2H6 1198 aaKnown RBP8.45□□□□□ -1.06
PSEN1-211ENST00000554995 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
PSEN1-211ENST00000554995 KCNMB2Q9Y691 235 aa8.45□□□□□ -1.06
PSEN1-211ENST00000554995 BMP2P12643 396 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 GMPRP36959 345 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 WDR44Q5JSH3 913 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
PSEN1-211ENST00000554995 PI16Q6UXB8 463 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 SNX29Q8TEQ0 813 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 UBXN4Q92575 508 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 CCDC74AQ96AQ1 378 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 TINF2Q9BSI4 451 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 CCSER2Q9H7U1 834 aa8.44□□□□□ -1.06
PSEN1-211ENST00000554995 UBAP1LF5GYI3 381 aa8.43□□□□□ -1.06
PSEN1-211ENST00000554995 MSX1P28360 303 aa8.43□□□□□ -1.06
PSEN1-211ENST00000554995 IRS1P35568 1242 aa8.43□□□□□ -1.06
PSEN1-211ENST00000554995 ARSJQ5FYB0 599 aaPredicted RBP8.43□□□□□ -1.06
PSEN1-211ENST00000554995 C6orf118Q5T5N4 469 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms