RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 STK31Q9BXU1 1019 aa15.89■□□□□ 0.13
SYNE2-214ENST00000554928 RIC3Q7Z5B4 369 aa15.88■□□□□ 0.13
SYNE2-214ENST00000554928 MYD88Q99836 296 aa15.88■□□□□ 0.13
SYNE2-214ENST00000554928 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
SYNE2-214ENST00000554928 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
SYNE2-214ENST00000554928 PI4KAP2A4QPH2 592 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 H0YIN7 160 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 FLIIQ13045 1269 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 PARP10Q53GL7 1025 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 HSP90AB3PQ58FF7 597 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 SLC51AQ86UW1 340 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 PI4KAP1Q8N8J0 262 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
SYNE2-214ENST00000554928 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
SYNE2-214ENST00000554928 IBTKQ9P2D0 1353 aaPredicted RBP15.87■□□□□ 0.13
SYNE2-214ENST00000554928 ANKRD36CQ5JPF3 1778 aa15.86■□□□□ 0.13
SYNE2-214ENST00000554928 KLRG2A4D1S0 409 aaPredicted RBP15.86■□□□□ 0.13
SYNE2-214ENST00000554928 SRGNP10124 158 aa15.86■□□□□ 0.13
SYNE2-214ENST00000554928 GTF2E1P29083 439 aaPredicted RBP15.86■□□□□ 0.13
SYNE2-214ENST00000554928 PDE6BP35913 854 aa15.86■□□□□ 0.13
SYNE2-214ENST00000554928 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
SYNE2-214ENST00000554928 JARID2Q92833 1246 aaPredicted RBP15.86■□□□□ 0.13
SYNE2-214ENST00000554928 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
SYNE2-214ENST00000554928 NYXQ9GZU5 481 aa15.86■□□□□ 0.13
SYNE2-214ENST00000554928 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
SYNE2-214ENST00000554928 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
SYNE2-214ENST00000554928 HCLS1P14317 486 aaPredicted RBP15.85■□□□□ 0.13
SYNE2-214ENST00000554928 RTL5Q5HYW3 569 aaPredicted RBP15.85■□□□□ 0.13
SYNE2-214ENST00000554928 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
SYNE2-214ENST00000554928 METTL22Q9BUU2 404 aaPredicted RBP15.85■□□□□ 0.13
SYNE2-214ENST00000554928 F6X3S4 739 aa15.84■□□□□ 0.13
SYNE2-214ENST00000554928 PPP1R42Q7Z4L9 355 aa15.84■□□□□ 0.13
SYNE2-214ENST00000554928 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
SYNE2-214ENST00000554928 BCL2L13Q9BXK5 485 aa15.84■□□□□ 0.13
SYNE2-214ENST00000554928 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
SYNE2-214ENST00000554928 DLEC1Q9Y238 1755 aa15.84■□□□□ 0.13
SYNE2-214ENST00000554928 GRIN3BO60391 1043 aa15.83■□□□□ 0.12
SYNE2-214ENST00000554928 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
SYNE2-214ENST00000554928 FKBP5Q13451 457 aaPredicted RBP15.83■□□□□ 0.12
SYNE2-214ENST00000554928 MRPL50Q8N5N7 158 aaKnown RBP15.83■□□□□ 0.12
SYNE2-214ENST00000554928 TTLL6Q8N841 843 aa15.83■□□□□ 0.12
SYNE2-214ENST00000554928 SSH1Q8WYL5 1049 aa15.83■□□□□ 0.12
SYNE2-214ENST00000554928 CHMP4AQ9BY43 222 aa15.83■□□□□ 0.12
SYNE2-214ENST00000554928 TRIM28Q13263 835 aaKnown RBP15.82■□□□□ 0.12
SYNE2-214ENST00000554928 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
SYNE2-214ENST00000554928 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
SYNE2-214ENST00000554928 SLC10A5Q5PT55 438 aa15.82■□□□□ 0.12
SYNE2-214ENST00000554928 STYK1Q6J9G0 422 aa15.82■□□□□ 0.12
SYNE2-214ENST00000554928 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
SYNE2-214ENST00000554928 MASTLQ96GX5 879 aa15.82■□□□□ 0.12
SYNE2-214ENST00000554928 RIC1Q4ADV7 1423 aa15.82■□□□□ 0.12
SYNE2-214ENST00000554928 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
SYNE2-214ENST00000554928 ARHGAP27Q6ZUM4 889 aa15.81■□□□□ 0.12
SYNE2-214ENST00000554928 SH3TC1Q8TE82 1336 aa15.81■□□□□ 0.12
SYNE2-214ENST00000554928 C21orf2O43822 256 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 NPR1P16066 1061 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 YY1P25490 414 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 PRELPP51888 382 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 RASSF7Q02833 373 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 DNAAF4Q8WXU2 420 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
SYNE2-214ENST00000554928 NEURL1BA8MQ27 555 aa15.79■□□□□ 0.12
SYNE2-214ENST00000554928 C7orf43Q8WVR3 580 aa15.79■□□□□ 0.12
SYNE2-214ENST00000554928 CWC25Q9NXE8 425 aaPredicted RBP15.79■□□□□ 0.12
SYNE2-214ENST00000554928 COL4A1P02462 1669 aa15.79■□□□□ 0.12
SYNE2-214ENST00000554928 ARFGEF1Q9Y6D6 1849 aa15.78■□□□□ 0.12
SYNE2-214ENST00000554928 RNF123Q5XPI4 1314 aa15.78■□□□□ 0.12
SYNE2-214ENST00000554928 ZBED9Q6R2W3 1325 aa15.78■□□□□ 0.12
SYNE2-214ENST00000554928 NFKBIEO00221 500 aa15.78■□□□□ 0.12
SYNE2-214ENST00000554928 CCDC191Q8NCU4 936 aa15.78■□□□□ 0.12
SYNE2-214ENST00000554928 CNKSR1Q969H4 720 aa15.78■□□□□ 0.12
SYNE2-214ENST00000554928 DDX60Q8IY21 1712 aaKnown RBP15.77■□□□□ 0.12
SYNE2-214ENST00000554928 IRS4O14654 1257 aaPredicted RBP15.77■□□□□ 0.12
SYNE2-214ENST00000554928 PCCAP05165 728 aaPredicted RBP15.77■□□□□ 0.12
SYNE2-214ENST00000554928 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
SYNE2-214ENST00000554928 BEND3Q5T5X7 828 aa15.77■□□□□ 0.12
SYNE2-214ENST00000554928 ZBTB38Q8NAP3 1195 aaPredicted RBP15.77■□□□□ 0.12
SYNE2-214ENST00000554928 NLRP3Q96P20 1036 aa15.77■□□□□ 0.12
SYNE2-214ENST00000554928 ABCC4O15439 1325 aa15.76■□□□□ 0.11
SYNE2-214ENST00000554928 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
SYNE2-214ENST00000554928 RARSP54136 660 aaKnown RBP15.76■□□□□ 0.11
SYNE2-214ENST00000554928 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
SYNE2-214ENST00000554928 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
SYNE2-214ENST00000554928 LAMB2P55268 1798 aa15.76■□□□□ 0.11
SYNE2-214ENST00000554928 CACNA1SQ13698 1873 aa15.76■□□□□ 0.11
SYNE2-214ENST00000554928 CASP7P55210 303 aa15.75■□□□□ 0.11
SYNE2-214ENST00000554928 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
SYNE2-214ENST00000554928 GCKRQ14397 625 aa15.75■□□□□ 0.11
SYNE2-214ENST00000554928 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
SYNE2-214ENST00000554928 CCDC85AQ96PX6 553 aaPredicted RBP15.75■□□□□ 0.11
SYNE2-214ENST00000554928 H7C1W4 665 aa15.74■□□□□ 0.11
SYNE2-214ENST00000554928 SLC4A10Q6U841 1118 aa15.74■□□□□ 0.11
SYNE2-214ENST00000554928 LINS1Q8NG48 757 aa15.74■□□□□ 0.11
SYNE2-214ENST00000554928 RBM17Q96I25 401 aaKnown RBP15.74■□□□□ 0.11
SYNE2-214ENST00000554928 CRAMP1Q96RY5 1269 aa15.74■□□□□ 0.11
SYNE2-214ENST00000554928 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
SYNE2-214ENST00000554928 SF3B3Q15393 1217 aaKnown RBP15.73■□□□□ 0.11
SYNE2-214ENST00000554928 C9orf131Q5VYM1 1079 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms