RNA–Protein interactions for RNA: ENST00000554869.5

LRR1-204, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best)

Gene LRR1, Length 1,886 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-204ENST00000554869 ZNF521Q96K83 1311 aa22.86■■□□□ 1.25
LRR1-204ENST00000554869 RIC3Q7Z5B4 369 aa22.86■■□□□ 1.25
LRR1-204ENST00000554869 EXOSC9Q06265 439 aaKnown RBP22.85■■□□□ 1.25
LRR1-204ENST00000554869 RNF123Q5XPI4 1314 aa22.85■■□□□ 1.25
LRR1-204ENST00000554869 RIC1Q4ADV7 1423 aa22.85■■□□□ 1.25
LRR1-204ENST00000554869 ISCA1Q9BUE6 129 aa22.84■■□□□ 1.25
LRR1-204ENST00000554869 ARFGEF2Q9Y6D5 1785 aa22.84■■□□□ 1.25
LRR1-204ENST00000554869 TCERG1O14776 1098 aaKnown RBP22.83■■□□□ 1.25
LRR1-204ENST00000554869 VAMP4O75379 141 aa22.83■■□□□ 1.25
LRR1-204ENST00000554869 DDX58O95786 925 aaKnown RBP22.83■■□□□ 1.25
LRR1-204ENST00000554869 CRY2Q49AN0 593 aa22.83■■□□□ 1.25
LRR1-204ENST00000554869 SLC10A5Q5PT55 438 aa22.83■■□□□ 1.25
LRR1-204ENST00000554869 PRPF40BQ6NWY9 871 aaKnown RBP22.83■■□□□ 1.25
LRR1-204ENST00000554869 CACNA1SQ13698 1873 aa22.83■■□□□ 1.25
LRR1-204ENST00000554869 SLX4Q8IY92 1834 aa22.83■■□□□ 1.25
LRR1-204ENST00000554869 C21orf2O43822 256 aa22.83■■□□□ 1.24
LRR1-204ENST00000554869 ZNF219Q9P2Y4 722 aaPredicted RBP22.83■■□□□ 1.24
LRR1-204ENST00000554869 TRMT112Q9UI30 125 aaKnown RBP22.83■■□□□ 1.24
LRR1-204ENST00000554869 TNRC6CQ9HCJ0 1690 aaKnown RBP22.83■■□□□ 1.24
LRR1-204ENST00000554869 SLC4A2P04920 1241 aa22.82■■□□□ 1.24
LRR1-204ENST00000554869 ALDH1B1P30837 517 aa22.82■■□□□ 1.24
LRR1-204ENST00000554869 ADCY9O60503 1353 aa22.82■■□□□ 1.24
LRR1-204ENST00000554869 ATP5J2-PTCD1G3V325 749 aa22.81■■□□□ 1.24
LRR1-204ENST00000554869 NLRP3Q96P20 1036 aa22.81■■□□□ 1.24
LRR1-204ENST00000554869 SUPT16HQ9Y5B9 1047 aaKnown RBP22.81■■□□□ 1.24
LRR1-204ENST00000554869 TRIM28Q13263 835 aaKnown RBP22.81■■□□□ 1.24
LRR1-204ENST00000554869 SH3TC1Q8TE82 1336 aa22.8■■□□□ 1.24
LRR1-204ENST00000554869 CACNA1FO60840 1977 aa22.8■■□□□ 1.24
LRR1-204ENST00000554869 C9orf131Q5VYM1 1079 aa22.8■■□□□ 1.24
LRR1-204ENST00000554869 RPGRQ92834 1020 aaKnown RBP22.8■■□□□ 1.24
LRR1-204ENST00000554869 SBF1O95248 1867 aa22.8■■□□□ 1.24
LRR1-204ENST00000554869 SOGA3Q5TF21 947 aa22.79■■□□□ 1.24
LRR1-204ENST00000554869 RASSF7Q02833 373 aa22.79■■□□□ 1.24
LRR1-204ENST00000554869 HOXA10P31260 410 aaPredicted RBP22.78■■□□□ 1.24
LRR1-204ENST00000554869 KSR2Q6VAB6 950 aa22.78■■□□□ 1.24
LRR1-204ENST00000554869 SYNE4Q8N205 404 aa22.78■■□□□ 1.24
LRR1-204ENST00000554869 MYD88Q99836 296 aa22.78■■□□□ 1.24
LRR1-204ENST00000554869 METTL22Q9BUU2 404 aaPredicted RBP22.78■■□□□ 1.24
LRR1-204ENST00000554869 E9PSI1 815 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 NFKBIEO00221 500 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 C3orf67Q6ZVT6 689 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 G2E3Q7L622 706 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 C7orf43Q8WVR3 580 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 ZNF428Q96B54 188 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 RBM17Q96I25 401 aaKnown RBP22.77■■□□□ 1.24
LRR1-204ENST00000554869 RNF181Q9P0P0 153 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 MAP3K2Q9Y2U5 619 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 PI4KAP2A4QPH2 592 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
LRR1-204ENST00000554869 PI4KAP1Q8N8J0 262 aa22.77■■□□□ 1.24
LRR1-204ENST00000554869 FER1L6Q2WGJ9 1857 aa22.76■■□□□ 1.23
LRR1-204ENST00000554869 LMNB1P20700 586 aa22.76■■□□□ 1.23
LRR1-204ENST00000554869 CRAMP1Q96RY5 1269 aa22.76■■□□□ 1.23
LRR1-204ENST00000554869 CCDC191Q8NCU4 936 aa22.75■■□□□ 1.23
LRR1-204ENST00000554869 FAM89AQ96GI7 184 aa22.75■■□□□ 1.23
LRR1-204ENST00000554869 FLIIQ13045 1269 aa22.75■■□□□ 1.23
LRR1-204ENST00000554869 CCDC88AQ3V6T2 1871 aa22.74■■□□□ 1.23
LRR1-204ENST00000554869 SLFN5Q08AF3 891 aa22.74■■□□□ 1.23
LRR1-204ENST00000554869 CCDC93Q567U6 631 aa22.74■■□□□ 1.23
LRR1-204ENST00000554869 GPBP1L1Q9HC44 474 aaPredicted RBP22.73■■□□□ 1.23
LRR1-204ENST00000554869 LTBP3Q9NS15 1303 aa22.73■■□□□ 1.23
LRR1-204ENST00000554869 LAMB2P55268 1798 aa22.73■■□□□ 1.23
LRR1-204ENST00000554869 PRELPP51888 382 aa22.73■■□□□ 1.23
LRR1-204ENST00000554869 NEXNQ0ZGT2 675 aa22.73■■□□□ 1.23
LRR1-204ENST00000554869 ZBTB38Q8NAP3 1195 aaPredicted RBP22.73■■□□□ 1.23
LRR1-204ENST00000554869 ZNF526Q8TF50 670 aaPredicted RBP22.73■■□□□ 1.23
LRR1-204ENST00000554869 TAOK3Q9H2K8 898 aa22.73■■□□□ 1.23
LRR1-204ENST00000554869 CWC25Q9NXE8 425 aaPredicted RBP22.73■■□□□ 1.23
LRR1-204ENST00000554869 FKBP5Q13451 457 aaPredicted RBP22.72■■□□□ 1.23
LRR1-204ENST00000554869 RTL5Q5HYW3 569 aaPredicted RBP22.72■■□□□ 1.23
LRR1-204ENST00000554869 RTKN2Q8IZC4 609 aa22.71■■□□□ 1.23
LRR1-204ENST00000554869 DDX60Q8IY21 1712 aaKnown RBP22.71■■□□□ 1.23
LRR1-204ENST00000554869 IRS4O14654 1257 aaPredicted RBP22.71■■□□□ 1.23
LRR1-204ENST00000554869 CDCA7LQ96GN5 454 aa22.71■■□□□ 1.23
LRR1-204ENST00000554869 CC2D2BQ6DHV5 1058 aa22.7■■□□□ 1.22
LRR1-204ENST00000554869 OLFM4Q6UX06 510 aa22.7■■□□□ 1.22
LRR1-204ENST00000554869 ZC3H4Q9UPT8 1303 aaKnown RBP22.69■■□□□ 1.22
LRR1-204ENST00000554869 PCCAP05165 728 aaPredicted RBP22.69■■□□□ 1.22
LRR1-204ENST00000554869 IGKV5-2P06315 115 aa22.69■■□□□ 1.22
LRR1-204ENST00000554869 HSP90B1P14625 803 aaKnown RBP22.69■■□□□ 1.22
LRR1-204ENST00000554869 DDX46Q7L014 1031 aaKnown RBP22.69■■□□□ 1.22
LRR1-204ENST00000554869 PPEF1O14829 653 aaPredicted RBP22.68■■□□□ 1.22
LRR1-204ENST00000554869 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
LRR1-204ENST00000554869 DNAAF4Q8WXU2 420 aa22.68■■□□□ 1.22
LRR1-204ENST00000554869 ABCC4O15439 1325 aa22.68■■□□□ 1.22
LRR1-204ENST00000554869 FKBP4Q02790 459 aaKnown RBP eCLIP22.68■■□□□ 1.22
LRR1-204ENST00000554869 DICER1Q9UPY3 1922 aaKnown RBP22.67■■□□□ 1.22
LRR1-204ENST00000554869 GRIPAP1Q4V328 841 aa22.67■■□□□ 1.22
LRR1-204ENST00000554869 TRMT2AQ8IZ69 625 aaKnown RBP22.67■■□□□ 1.22
LRR1-204ENST00000554869 NEURL1BA8MQ27 555 aa22.66■■□□□ 1.22
LRR1-204ENST00000554869 BBOX1O75936 387 aa22.66■■□□□ 1.22
LRR1-204ENST00000554869 TMX4Q9H1E5 349 aaPredicted RBP22.66■■□□□ 1.22
LRR1-204ENST00000554869 CWF19L2Q2TBE0 894 aaKnown RBP22.66■■□□□ 1.22
LRR1-204ENST00000554869 GRAPQ13588 217 aa22.65■■□□□ 1.22
LRR1-204ENST00000554869 GRAPLQ8TC17 118 aaPredicted RBP22.65■■□□□ 1.22
LRR1-204ENST00000554869 JARID2Q92833 1246 aaPredicted RBP22.65■■□□□ 1.22
LRR1-204ENST00000554869 PDE8AO60658 829 aa22.64■■□□□ 1.22
LRR1-204ENST00000554869 PSMD1Q99460 953 aa22.64■■□□□ 1.22
LRR1-204ENST00000554869 ATP6V0A2Q9Y487 856 aa22.64■■□□□ 1.22
LRR1-204ENST00000554869 KDM2BQ8NHM5 1336 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms