RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TNFRSF10BO14763 440 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 MICAL2O94851 1124 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 ADH6P28332 368 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 INPP5BP32019 993 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 IDH3AP50213 366 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 PHLDB3Q6NSJ2 640 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 IFT43Q96FT9 208 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 SLC30A3Q99726 388 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 ENAMQ9NRM1 1142 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 PRR12Q9ULL5 1215 aa5.86□□□□□ -1.47
SCFD1-213ENST00000554776 NEURL1BA8MQ27 555 aa5.85□□□□□ -1.47
SCFD1-213ENST00000554776 SHISA8B8ZZ34 492 aa5.85□□□□□ -1.47
SCFD1-213ENST00000554776 EPXP11678 715 aa5.85□□□□□ -1.47
SCFD1-213ENST00000554776 GRNP28799 593 aaKnown RBP5.85□□□□□ -1.47
SCFD1-213ENST00000554776 ARSDP51689 593 aa5.85□□□□□ -1.47
SCFD1-213ENST00000554776 SPEM2Q0P670 501 aa5.85□□□□□ -1.47
SCFD1-213ENST00000554776 NAA30Q147X3 362 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-213ENST00000554776 GALNT6Q8NCL4 622 aa5.85□□□□□ -1.47
SCFD1-213ENST00000554776 EDARADDQ8WWZ3 215 aa5.85□□□□□ -1.47
SCFD1-213ENST00000554776 DNMT3AQ9Y6K1 912 aaPredicted RBP5.85□□□□□ -1.47
SCFD1-213ENST00000554776 SIN3BO75182 1162 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 EPB42P16452 691 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 BRD2P25440 801 aaKnown RBP5.84□□□□□ -1.47
SCFD1-213ENST00000554776 PCBP4P57723 403 aaKnown RBP5.84□□□□□ -1.47
SCFD1-213ENST00000554776 FAM26DQ5JW98 314 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 SYT9Q86SS6 491 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 FCHSD1Q86WN1 690 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 TREML1Q86YW5 311 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 ETFBKMTQ8IXQ9 262 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 MDFIQ99750 246 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 SEPT3Q9UH03 358 aa5.84□□□□□ -1.47
SCFD1-213ENST00000554776 OPLAHO14841 1288 aa5.83□□□□□ -1.48
SCFD1-213ENST00000554776 SCNN1AP37088 669 aa5.83□□□□□ -1.48
SCFD1-213ENST00000554776 GSX2Q9BZM3 304 aa5.83□□□□□ -1.48
SCFD1-213ENST00000554776 EFCC1Q9HA90 598 aa5.83□□□□□ -1.48
SCFD1-213ENST00000554776 C11orf16Q9NQ32 467 aa5.83□□□□□ -1.48
SCFD1-213ENST00000554776 ADARB2-AS1A8MUL3 147 aa5.82□□□□□ -1.48
SCFD1-213ENST00000554776 PDE4CQ08493 712 aa5.82□□□□□ -1.48
SCFD1-213ENST00000554776 NEUROD1Q13562 356 aa5.82□□□□□ -1.48
SCFD1-213ENST00000554776 CCINQ13939 588 aa5.82□□□□□ -1.48
SCFD1-213ENST00000554776 RAB44Q7Z6P3 723 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-213ENST00000554776 NEDD1Q8NHV4 660 aa5.82□□□□□ -1.48
SCFD1-213ENST00000554776 TNFRSF25Q93038 417 aa5.82□□□□□ -1.48
SCFD1-213ENST00000554776 STIM2Q9P246 746 aa5.82□□□□□ -1.48
SCFD1-213ENST00000554776 MARSP56192 900 aaKnown RBP5.81□□□□□ -1.48
SCFD1-213ENST00000554776 ABTB2Q8N961 1025 aa5.81□□□□□ -1.48
SCFD1-213ENST00000554776 HELQQ8TDG4 1101 aa5.81□□□□□ -1.48
SCFD1-213ENST00000554776 BHMTQ93088 406 aa5.81□□□□□ -1.48
SCFD1-213ENST00000554776 BTBD6Q96KE9 485 aa5.81□□□□□ -1.48
SCFD1-213ENST00000554776 RTCBQ9Y3I0 505 aaKnown RBP5.81□□□□□ -1.48
SCFD1-213ENST00000554776 ELOA3CA0A087WX78 387 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-213ENST00000554776 ELOA3DA6NLF2 546 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-213ENST00000554776 EGFRP00533 1210 aa5.8□□□□□ -1.48
SCFD1-213ENST00000554776 HOXB4P17483 251 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-213ENST00000554776 ELOA3BQ3SY89 546 aa5.8□□□□□ -1.48
SCFD1-213ENST00000554776 B4GALNT3Q6L9W6 998 aa5.8□□□□□ -1.48
SCFD1-213ENST00000554776 ELOA3Q8NG57 546 aa5.8□□□□□ -1.48
SCFD1-213ENST00000554776 GTF3C2Q8WUA4 911 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-213ENST00000554776 SCARF2Q96GP6 870 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-213ENST00000554776 TRAIPQ9BWF2 469 aa5.8□□□□□ -1.48
SCFD1-213ENST00000554776 USP20Q9Y2K6 914 aa5.8□□□□□ -1.48
SCFD1-213ENST00000554776 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-213ENST00000554776 RNF225M0QZC1 329 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-213ENST00000554776 ZBTB39O15060 712 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 NFKB1P19838 968 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 ZAP70P43403 619 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 KCNMA1Q12791 1236 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 CHSY3Q70JA7 882 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 RGL4Q8IZJ4 473 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 PNMA5Q96PV4 448 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 FAM13BQ9NYF5 915 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 MTMR7Q9Y216 660 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 KCNMB2Q9Y691 235 aa5.79□□□□□ -1.48
SCFD1-213ENST00000554776 CNTNAP5Q8WYK1 1306 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 MAP3K6O95382 1288 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 NPR3P17342 541 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 ALAS2P22557 587 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 AMPD1P23109 780 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 ADH7P40394 386 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 DGKGP49619 791 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 GSK3AP49840 483 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 SNRPNP63162 240 aaKnown RBP5.78□□□□□ -1.48
SCFD1-213ENST00000554776 TRIP4Q15650 581 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-213ENST00000554776 CMTR1Q8N1G2 835 aaKnown RBP5.78□□□□□ -1.48
SCFD1-213ENST00000554776 ZFATQ9P243 1243 aa5.78□□□□□ -1.48
SCFD1-213ENST00000554776 XYLBO75191 536 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 SASH3O75995 380 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 BRD1O95696 1058 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 KANK3Q6NY19 840 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 LINC00114Q6XXX2 140 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 PODNQ7Z5L7 613 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 BEND7Q8N7W2 519 aaPredicted RBP5.77□□□□□ -1.49
SCFD1-213ENST00000554776 PIK3R5Q8WYR1 880 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 UBE2OQ9C0C9 1292 aaKnown RBP5.77□□□□□ -1.49
SCFD1-213ENST00000554776 RRAGCQ9HB90 399 aa5.77□□□□□ -1.49
SCFD1-213ENST00000554776 PHF20L1A8MW92 1017 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 RARAP10276 462 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 MPSTP25325 297 aa5.76□□□□□ -1.49
SCFD1-213ENST00000554776 TARSP26639 723 aaKnown RBP5.76□□□□□ -1.49
SCFD1-213ENST00000554776 ARID4AP29374 1257 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms