RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 IFT57Q9NWB7 429 aa13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
PTCD2P1-201ENST00000554393 KIF3CO14782 793 aa13.55□□□□□ -0.24
PTCD2P1-201ENST00000554393 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
PTCD2P1-201ENST00000554393 ZBTB3Q9H5J0 574 aa13.55□□□□□ -0.24
PTCD2P1-201ENST00000554393 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
PTCD2P1-201ENST00000554393 LAS1LQ9Y4W2 734 aaKnown RBP13.55□□□□□ -0.24
PTCD2P1-201ENST00000554393 WDR90Q96KV7 1748 aa13.55□□□□□ -0.24
PTCD2P1-201ENST00000554393 NPR1P16066 1061 aa13.54□□□□□ -0.24
PTCD2P1-201ENST00000554393 GNAI1P63096 354 aa13.54□□□□□ -0.24
PTCD2P1-201ENST00000554393 CCDC184Q52MB2 194 aa13.54□□□□□ -0.24
PTCD2P1-201ENST00000554393 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
PTCD2P1-201ENST00000554393 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
PTCD2P1-201ENST00000554393 RNF181Q9P0P0 153 aa13.54□□□□□ -0.24
PTCD2P1-201ENST00000554393 CLEC11AQ9Y240 323 aa13.54□□□□□ -0.24
PTCD2P1-201ENST00000554393 LMNB1P20700 586 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 CCDC27Q2M243 656 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 KRT24Q2M2I5 525 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 PROSER3Q2NL68 480 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 PRPF40BQ6NWY9 871 aaKnown RBP13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 UBN2Q6ZU65 1347 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 LTBP3Q9NS15 1303 aa13.53□□□□□ -0.24
PTCD2P1-201ENST00000554393 NFKBIEO00221 500 aa13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 RASSF7Q02833 373 aa13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 CRY2Q49AN0 593 aa13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 HSP90AB3PQ58FF7 597 aa13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 HDGFL1Q5TGJ6 251 aa13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 MRS2Q9HD23 443 aa13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 DBF4Q9UBU7 674 aaPredicted RBP13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 ABCC12Q96J65 1359 aa13.52□□□□□ -0.25
PTCD2P1-201ENST00000554393 LAMB2P55268 1798 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 C21orf2O43822 256 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 ANXA1P04083 346 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 GPTP24298 496 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 DUSP27Q5VZP5 1158 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 COPS6Q7L5N1 327 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 PPP1R42Q7Z4L9 355 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 CHPF2Q9P2E5 772 aa13.51□□□□□ -0.25
PTCD2P1-201ENST00000554393 NTSR2O95665 410 aa13.5□□□□□ -0.25
PTCD2P1-201ENST00000554393 ALDH1B1P30837 517 aa13.5□□□□□ -0.25
PTCD2P1-201ENST00000554393 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
PTCD2P1-201ENST00000554393 XAGE3Q8WTP9 111 aa13.5□□□□□ -0.25
PTCD2P1-201ENST00000554393 C7orf43Q8WVR3 580 aa13.5□□□□□ -0.25
PTCD2P1-201ENST00000554393 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
PTCD2P1-201ENST00000554393 HYPKQ9NX55 129 aa13.5□□□□□ -0.25
PTCD2P1-201ENST00000554393 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
PTCD2P1-201ENST00000554393 TOMM70O94826 608 aa13.49□□□□□ -0.25
PTCD2P1-201ENST00000554393 ERFEQ4G0M1 354 aa13.49□□□□□ -0.25
PTCD2P1-201ENST00000554393 NUTM1Q86Y26 1132 aa13.49□□□□□ -0.25
PTCD2P1-201ENST00000554393 TAOK3Q9H2K8 898 aa13.49□□□□□ -0.25
PTCD2P1-201ENST00000554393 IL16Q14005 1332 aa13.48□□□□□ -0.25
PTCD2P1-201ENST00000554393 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
PTCD2P1-201ENST00000554393 AIMP1Q12904 312 aaKnown RBP13.48□□□□□ -0.25
PTCD2P1-201ENST00000554393 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
PTCD2P1-201ENST00000554393 WWC1Q8IX03 1113 aa13.48□□□□□ -0.25
PTCD2P1-201ENST00000554393 PLBD2Q8NHP8 589 aa13.48□□□□□ -0.25
PTCD2P1-201ENST00000554393 UTP14AQ9BVJ6 771 aaKnown RBP13.48□□□□□ -0.25
PTCD2P1-201ENST00000554393 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
PTCD2P1-201ENST00000554393 HTRA3P83110 453 aa13.47□□□□□ -0.25
PTCD2P1-201ENST00000554393 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
PTCD2P1-201ENST00000554393 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
PTCD2P1-201ENST00000554393 NLRP10Q86W26 655 aa13.47□□□□□ -0.25
PTCD2P1-201ENST00000554393 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
PTCD2P1-201ENST00000554393 CC2D2BQ6DHV5 1058 aa13.46□□□□□ -0.25
PTCD2P1-201ENST00000554393 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
PTCD2P1-201ENST00000554393 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
PTCD2P1-201ENST00000554393 RPGRQ92834 1020 aaKnown RBP13.46□□□□□ -0.25
PTCD2P1-201ENST00000554393 CRAMP1Q96RY5 1269 aa13.46□□□□□ -0.25
PTCD2P1-201ENST00000554393 NMRK2Q9NPI5 230 aa13.46□□□□□ -0.25
PTCD2P1-201ENST00000554393 GLTPD2A6NH11 291 aa13.45□□□□□ -0.26
PTCD2P1-201ENST00000554393 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
PTCD2P1-201ENST00000554393 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTCD2P1-201ENST00000554393 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
PTCD2P1-201ENST00000554393 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
PTCD2P1-201ENST00000554393 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
PTCD2P1-201ENST00000554393 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
PTCD2P1-201ENST00000554393 CCDC30Q5VVM6 783 aa13.44□□□□□ -0.26
PTCD2P1-201ENST00000554393 RBM17Q96I25 401 aaKnown RBP13.44□□□□□ -0.26
PTCD2P1-201ENST00000554393 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
PTCD2P1-201ENST00000554393 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 PSMD1Q99460 953 aa13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 TRMT112Q9UI30 125 aaKnown RBP13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 SCN4AP35499 1836 aa13.43□□□□□ -0.26
PTCD2P1-201ENST00000554393 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
PTCD2P1-201ENST00000554393 VASPP50552 380 aaPredicted RBP13.42□□□□□ -0.26
PTCD2P1-201ENST00000554393 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
PTCD2P1-201ENST00000554393 C3orf67Q6ZVT6 689 aa13.42□□□□□ -0.26
PTCD2P1-201ENST00000554393 C16orf71Q8IYS4 520 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms