RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 NGEFQ8N5V2 710 aa15.39■□□□□ 0.05
TUBB3-204ENST00000554116 THUMPD2Q9BTF0 503 aaKnown RBP15.39■□□□□ 0.05
TUBB3-204ENST00000554116 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
TUBB3-204ENST00000554116 MAP3K15Q6ZN16 1313 aa15.39■□□□□ 0.05
TUBB3-204ENST00000554116 RIC1Q4ADV7 1423 aa15.38■□□□□ 0.05
TUBB3-204ENST00000554116 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
TUBB3-204ENST00000554116 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
TUBB3-204ENST00000554116 ZNF34Q8IZ26 560 aa15.38■□□□□ 0.05
TUBB3-204ENST00000554116 CNTROBQ8N137 903 aa15.38■□□□□ 0.05
TUBB3-204ENST00000554116 GPC2Q8N158 579 aa15.38■□□□□ 0.05
TUBB3-204ENST00000554116 GPTP24298 496 aa15.37■□□□□ 0.05
TUBB3-204ENST00000554116 SCNN1DP51172 638 aa15.37■□□□□ 0.05
TUBB3-204ENST00000554116 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
TUBB3-204ENST00000554116 NTSR2O95665 410 aa15.36■□□□□ 0.05
TUBB3-204ENST00000554116 LBX1P52954 281 aa15.36■□□□□ 0.05
TUBB3-204ENST00000554116 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
TUBB3-204ENST00000554116 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
TUBB3-204ENST00000554116 EPS15P42566 896 aa15.35■□□□□ 0.05
TUBB3-204ENST00000554116 PDIA6Q15084 440 aa15.35■□□□□ 0.05
TUBB3-204ENST00000554116 PNMA8AQ86V59 439 aaPredicted RBP15.35■□□□□ 0.05
TUBB3-204ENST00000554116 ZBTB3Q9H5J0 574 aa15.35■□□□□ 0.05
TUBB3-204ENST00000554116 IBTKQ9P2D0 1353 aaPredicted RBP15.35■□□□□ 0.05
TUBB3-204ENST00000554116 LAMB2P55268 1798 aa15.34■□□□□ 0.05
TUBB3-204ENST00000554116 MYL6BP14649 208 aa15.34■□□□□ 0.05
TUBB3-204ENST00000554116 GTF2E1P29083 439 aaPredicted RBP15.34■□□□□ 0.05
TUBB3-204ENST00000554116 MAP2K1Q02750 393 aaPredicted RBP15.34■□□□□ 0.05
TUBB3-204ENST00000554116 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
TUBB3-204ENST00000554116 ABHD8Q96I13 439 aa15.34■□□□□ 0.05
TUBB3-204ENST00000554116 NYXQ9GZU5 481 aa15.34■□□□□ 0.05
TUBB3-204ENST00000554116 THSD7BQ9C0I4 1608 aa15.34■□□□□ 0.05
TUBB3-204ENST00000554116 TAF1P21675 1872 aa15.33■□□□□ 0.05
TUBB3-204ENST00000554116 TRPM7Q96QT4 1865 aa15.33■□□□□ 0.05
TUBB3-204ENST00000554116 HSPA8P11142 646 aaKnown RBP15.33■□□□□ 0.04
TUBB3-204ENST00000554116 NFE2L2Q16236 605 aa15.33■□□□□ 0.04
TUBB3-204ENST00000554116 FAM161AQ3B820 660 aa15.33■□□□□ 0.04
TUBB3-204ENST00000554116 CST9Q5W186 159 aa15.33■□□□□ 0.04
TUBB3-204ENST00000554116 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.04
TUBB3-204ENST00000554116 GIGYF2Q6Y7W6 1299 aaKnown RBP15.33■□□□□ 0.04
TUBB3-204ENST00000554116 CRAMP1Q96RY5 1269 aa15.33■□□□□ 0.04
TUBB3-204ENST00000554116 DDX21Q9NR30 783 aaKnown RBP eCLIP15.33■□□□□ 0.04
TUBB3-204ENST00000554116 GJA3Q9Y6H8 435 aa15.33■□□□□ 0.04
TUBB3-204ENST00000554116 PROSER3Q2NL68 480 aa15.32■□□□□ 0.04
TUBB3-204ENST00000554116 JDP2Q8WYK2 163 aa15.32■□□□□ 0.04
TUBB3-204ENST00000554116 WDR33Q9C0J8 1336 aaKnown RBP15.32■□□□□ 0.04
TUBB3-204ENST00000554116 TRAF5O00463 557 aa15.31■□□□□ 0.04
TUBB3-204ENST00000554116 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
TUBB3-204ENST00000554116 SLC10A5Q5PT55 438 aa15.31■□□□□ 0.04
TUBB3-204ENST00000554116 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
TUBB3-204ENST00000554116 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
TUBB3-204ENST00000554116 ANXA1P04083 346 aa15.3■□□□□ 0.04
TUBB3-204ENST00000554116 KIF6Q6ZMV9 814 aa15.3■□□□□ 0.04
TUBB3-204ENST00000554116 LARGE2Q8N3Y3 721 aa15.3■□□□□ 0.04
TUBB3-204ENST00000554116 RPGRQ92834 1020 aaKnown RBP15.3■□□□□ 0.04
TUBB3-204ENST00000554116 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
TUBB3-204ENST00000554116 EIF6P56537 245 aaKnown RBP15.29■□□□□ 0.04
TUBB3-204ENST00000554116 CXCL9Q07325 125 aa15.29■□□□□ 0.04
TUBB3-204ENST00000554116 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
TUBB3-204ENST00000554116 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
TUBB3-204ENST00000554116 ABCC4O15439 1325 aa15.28■□□□□ 0.04
TUBB3-204ENST00000554116 ERBB4Q15303 1308 aa15.28■□□□□ 0.04
TUBB3-204ENST00000554116 AOC3Q16853 763 aa15.28■□□□□ 0.04
TUBB3-204ENST00000554116 RTFDC1Q9BY42 306 aaPredicted RBP15.28■□□□□ 0.04
TUBB3-204ENST00000554116 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
TUBB3-204ENST00000554116 COL4A1P02462 1669 aa15.28■□□□□ 0.04
TUBB3-204ENST00000554116 MLLT1Q03111 559 aaPredicted RBP15.27■□□□□ 0.04
TUBB3-204ENST00000554116 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.04
TUBB3-204ENST00000554116 CYP4F22Q6NT55 531 aa15.27■□□□□ 0.04
TUBB3-204ENST00000554116 USP50Q70EL3 339 aaPredicted RBP15.27■□□□□ 0.04
TUBB3-204ENST00000554116 CAPNS2Q96L46 248 aa15.27■□□□□ 0.04
TUBB3-204ENST00000554116 BEGAINQ9BUH8 593 aa15.27■□□□□ 0.04
TUBB3-204ENST00000554116 GPRC5DQ9NZD1 345 aa15.27■□□□□ 0.04
TUBB3-204ENST00000554116 PCDH10Q9P2E7 1040 aa15.27■□□□□ 0.04
TUBB3-204ENST00000554116 DUOX1Q9NRD9 1551 aa15.27■□□□□ 0.03
TUBB3-204ENST00000554116 PPIP5K2O43314 1243 aa15.26■□□□□ 0.03
TUBB3-204ENST00000554116 ECE1P42892 770 aa15.26■□□□□ 0.03
TUBB3-204ENST00000554116 HIRAP54198 1017 aaPredicted RBP15.26■□□□□ 0.03
TUBB3-204ENST00000554116 PARP10Q53GL7 1025 aa15.26■□□□□ 0.03
TUBB3-204ENST00000554116 PGAP2Q9UHJ9 254 aa15.26■□□□□ 0.03
TUBB3-204ENST00000554116 SHTN1A0MZ66 631 aa15.25■□□□□ 0.03
TUBB3-204ENST00000554116 HCLS1P14317 486 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-204ENST00000554116 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
TUBB3-204ENST00000554116 LMOD1P29536 600 aaPredicted RBP15.25■□□□□ 0.03
TUBB3-204ENST00000554116 PPP1R42Q7Z4L9 355 aa15.25■□□□□ 0.03
TUBB3-204ENST00000554116 NLRP10Q86W26 655 aa15.25■□□□□ 0.03
TUBB3-204ENST00000554116 NIM1KQ8IY84 436 aa15.25■□□□□ 0.03
TUBB3-204ENST00000554116 NLRP3Q96P20 1036 aa15.25■□□□□ 0.03
TUBB3-204ENST00000554116 UTP14AQ9BVJ6 771 aaKnown RBP15.25■□□□□ 0.03
TUBB3-204ENST00000554116 TSPYL4Q9UJ04 414 aa15.25■□□□□ 0.03
TUBB3-204ENST00000554116 TLL2Q9Y6L7 1015 aa15.25■□□□□ 0.03
TUBB3-204ENST00000554116 DDX60Q8IY21 1712 aaKnown RBP15.24■□□□□ 0.03
TUBB3-204ENST00000554116 CCDC85CA6NKD9 419 aa15.24■□□□□ 0.03
TUBB3-204ENST00000554116 YDJCA8MPS7 323 aa15.24■□□□□ 0.03
TUBB3-204ENST00000554116 AOC2O75106 756 aa15.24■□□□□ 0.03
TUBB3-204ENST00000554116 RGS19P49795 217 aa15.24■□□□□ 0.03
TUBB3-204ENST00000554116 GMPSP49915 693 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-204ENST00000554116 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
TUBB3-204ENST00000554116 GPR101Q96P66 508 aaPredicted RBP15.24■□□□□ 0.03
TUBB3-204ENST00000554116 VPS33BQ9H267 617 aa15.24■□□□□ 0.03
TUBB3-204ENST00000554116 ADARB2Q9NS39 739 aaKnown RBP15.24■□□□□ 0.03
TUBB3-204ENST00000554116 ZNRF3Q9ULT6 936 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms