RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 IQCA1LA6NCM1 817 aa9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 EAPPQ56P03 285 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 LDHDQ86WU2 507 aa9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 L3MBTL3Q96JM7 780 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 PHACTR3Q96KR7 559 aa9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 USP16Q9Y5T5 823 aa9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 KDM3BQ7LBC6 1761 aa9.12□□□□□ -0.95
MTHFD1-205ENST00000554057 FAM177BA6PVY3 158 aa9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 NEFMP07197 916 aa9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 NPR1P16066 1061 aa9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 FKBP4Q02790 459 aaKnown RBP eCLIP9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 C7orf43Q8WVR3 580 aa9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 ZNF652Q9Y2D9 606 aa9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 ADAMTSL1Q8N6G6 1762 aa9.11□□□□□ -0.95
MTHFD1-205ENST00000554057 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 ITGBL1O95965 494 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 VEGFBP49765 207 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 C20orf194Q5TEA3 1177 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 CLEC4GQ6UXB4 293 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 MCM10Q7L590 875 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 HACL1Q9UJ83 578 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 NIP7Q9Y221 180 aaKnown RBP eCLIP9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 ABCC12Q96J65 1359 aa9.1□□□□□ -0.95
MTHFD1-205ENST00000554057 MAPK8IP3Q9UPT6 1336 aa9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 TMEM88BA6NKF7 163 aa9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 SNRPA1P09661 255 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 EPHX2P34913 555 aa9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 CTCFP49711 727 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 DCTN1Q14203 1278 aa9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 MAP1SQ66K74 1059 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 AIDAQ96BJ3 306 aa9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 PRDM10Q9NQV6 1147 aa9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 COL4A5P29400 1685 aa9.09□□□□□ -0.95
MTHFD1-205ENST00000554057 SNED1Q8TER0 1413 aa9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 KLRG2A4D1S0 409 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 APAF1O14727 1248 aa9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 IARSP41252 1262 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 HLFQ16534 295 aa9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 C8orf34Q49A92 452 aa9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 SLC51AQ86UW1 340 aa9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 LTBP1Q14766 1721 aa9.08□□□□□ -0.96
MTHFD1-205ENST00000554057 U2AF1L5P0DN76 240 aaPredicted RBP9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 LBX1P52954 281 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 U2AF1Q01081 240 aaKnown RBP eCLIP9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 CCDC27Q2M243 656 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 TPTE2Q6XPS3 522 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 NUTM1Q86Y26 1132 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 WDR63Q8IWG1 891 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 RTKN2Q8IZC4 609 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 SYNE4Q8N205 404 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 RTF1Q92541 710 aaKnown RBP9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 CFAP53Q96M91 514 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
MTHFD1-205ENST00000554057 RASSF10A6NK89 507 aa9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 FZD9O00144 591 aa9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 HSPA8P11142 646 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 GTF2E1P29083 439 aaPredicted RBP9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 CNTROBQ8N137 903 aa9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 RUNDC1Q96C34 613 aa9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 ABT1Q9ULW3 272 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 LAS1LQ9Y4W2 734 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 GJA3Q9Y6H8 435 aa9.06□□□□□ -0.96
MTHFD1-205ENST00000554057 THSD7BQ9C0I4 1608 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 NUP98P52948 1817 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 RGL2O15211 777 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 CT47B1P0C2W7 299 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 ALDH1B1P30837 517 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 FMR1Q06787 632 aaKnown RBP eCLIP9.05□□□□□ -0.962e-6■■■□□ 16.5
MTHFD1-205ENST00000554057 DEFB115Q30KQ5 88 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 PNMA8AQ86V59 439 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 GPC2Q8N158 579 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 JDP2Q8WYK2 163 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 PSMD1Q99460 953 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 MIS18AQ9NYP9 233 aa9.05□□□□□ -0.96
MTHFD1-205ENST00000554057 GPTP24298 496 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 EIF6P56537 245 aaKnown RBP9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 NFKBIBQ15653 356 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 CRY2Q49AN0 593 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 TTLL7Q6ZT98 887 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 PAXIP1Q6ZW49 1069 aaPredicted RBP9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 WWC1Q8IX03 1113 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 CCDC146Q8IYE0 955 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 RIC1Q4ADV7 1423 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 UBN2Q6ZU65 1347 aa9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 WDR33Q9C0J8 1336 aaKnown RBP9.04□□□□□ -0.96
MTHFD1-205ENST00000554057 IBTKQ9P2D0 1353 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-205ENST00000554057 TRPM7Q96QT4 1865 aa9.03□□□□□ -0.96
MTHFD1-205ENST00000554057 LMOD1P29536 600 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-205ENST00000554057 EPS15P42566 896 aa9.03□□□□□ -0.96
MTHFD1-205ENST00000554057 SCNN1DP51172 638 aa9.03□□□□□ -0.96
MTHFD1-205ENST00000554057 GRM1Q13255 1194 aa9.03□□□□□ -0.96
MTHFD1-205ENST00000554057 BECN1Q14457 450 aa9.03□□□□□ -0.96
MTHFD1-205ENST00000554057 GSE1Q14687 1217 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms