RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TRIM50Q86XT4 487 aa5.96□□□□□ -1.46
SRP54-204ENST00000553923 SLC6A14Q9UN76 642 aa5.96□□□□□ -1.46
SRP54-204ENST00000553923 NRG1Q02297 640 aaPredicted RBP5.95□□□□□ -1.46
SRP54-204ENST00000553923 BTLAQ7Z6A9 289 aa5.95□□□□□ -1.46
SRP54-204ENST00000553923 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
SRP54-204ENST00000553923 FMR1NBQ8N0W7 255 aaPredicted RBP5.95□□□□□ -1.46
SRP54-204ENST00000553923 STAG2Q8N3U4 1231 aa5.95□□□□□ -1.46
SRP54-204ENST00000553923 UCN2Q96RP3 112 aa5.95□□□□□ -1.46
SRP54-204ENST00000553923 GSX2Q9BZM3 304 aa5.95□□□□□ -1.46
SRP54-204ENST00000553923 EFCC1Q9HA90 598 aa5.95□□□□□ -1.46
SRP54-204ENST00000553923 NAGPAQ9UK23 515 aa5.95□□□□□ -1.46
SRP54-204ENST00000553923 ALDH16A1Q8IZ83 802 aa5.94□□□□□ -1.46
SRP54-204ENST00000553923 SIX5Q8N196 739 aa5.94□□□□□ -1.46
SRP54-204ENST00000553923 LARGE2Q8N3Y3 721 aa5.94□□□□□ -1.46
SRP54-204ENST00000553923 NUDT8Q8WV74 236 aa5.94□□□□□ -1.46
SRP54-204ENST00000553923 POM121Q96HA1 1249 aa5.94□□□□□ -1.46
SRP54-204ENST00000553923 C2orf49Q9BVC5 232 aaPredicted RBP5.94□□□□□ -1.46
SRP54-204ENST00000553923 UBE2OQ9C0C9 1292 aaKnown RBP5.94□□□□□ -1.46
SRP54-204ENST00000553923 JPH1Q9HDC5 661 aaPredicted RBP5.94□□□□□ -1.46
SRP54-204ENST00000553923 USP17L3A6NCW0 530 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 USP17L4A6NCW7 530 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 GRNP28799 593 aaKnown RBP5.93□□□□□ -1.46
SRP54-204ENST00000553923 ATP1A2P50993 1020 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 GRIK5Q16478 980 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 USP17L2Q6R6M4 530 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 USP17L1Q7RTZ2 530 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 TSEN2Q8NCE0 465 aaKnown RBP5.93□□□□□ -1.46
SRP54-204ENST00000553923 TP53INP1Q96A56 240 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
SRP54-204ENST00000553923 DNAJB12Q9NXW2 375 aaKnown RBP5.93□□□□□ -1.46
SRP54-204ENST00000553923 DMGDHQ9UI17 866 aaKnown RBP5.93□□□□□ -1.46
SRP54-204ENST00000553923 POM121CA8CG34 1229 aa5.92□□□□□ -1.46
SRP54-204ENST00000553923 RAC1P63000 192 aa5.92□□□□□ -1.46
SRP54-204ENST00000553923 PSAPL1Q6NUJ1 521 aa5.92□□□□□ -1.46
SRP54-204ENST00000553923 NBPF11Q86T75 865 aa5.92□□□□□ -1.46
SRP54-204ENST00000553923 DMRTC2Q8IXT2 367 aaPredicted RBP5.92□□□□□ -1.46
SRP54-204ENST00000553923 OGFOD1Q8N543 542 aa5.92□□□□□ -1.46
SRP54-204ENST00000553923 BCS1LQ9Y276 419 aa5.92□□□□□ -1.46
SRP54-204ENST00000553923 ATAD2Q6PL18 1390 aa5.92□□□□□ -1.46
SRP54-204ENST00000553923 PALM3A6NDB9 673 aaPredicted RBP5.91□□□□□ -1.46
SRP54-204ENST00000553923 PPP1R12BO60237 982 aaPredicted RBP5.91□□□□□ -1.46
SRP54-204ENST00000553923 IER5Q5VY09 327 aa5.91□□□□□ -1.46
SRP54-204ENST00000553923 MSL1Q68DK7 614 aa5.91□□□□□ -1.46
SRP54-204ENST00000553923 CHMP3Q9Y3E7 222 aa5.91□□□□□ -1.46
SRP54-204ENST00000553923 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.91□□□□□ -1.46
SRP54-204ENST00000553923 ZBTB42B2RXF5 422 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 ATP9BO43861 1147 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 PLAURQ03405 335 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 TBC1D8BQ0IIM8 1120 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 FBXO11Q86XK2 927 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 GAS2L2Q8NHY3 880 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 LPIN3Q9BQK8 851 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 IGFLR1Q9H665 355 aa5.9□□□□□ -1.46
SRP54-204ENST00000553923 MKRN1Q9UHC7 482 aaKnown RBP5.9□□□□□ -1.46
SRP54-204ENST00000553923 RGS9O75916 674 aaPredicted RBP5.89□□□□□ -1.47
SRP54-204ENST00000553923 NOS3P29474 1203 aa5.89□□□□□ -1.47
SRP54-204ENST00000553923 CCINQ13939 588 aa5.89□□□□□ -1.47
SRP54-204ENST00000553923 HIF1AQ16665 826 aa5.89□□□□□ -1.47
SRP54-204ENST00000553923 DTWD1Q8N5C7 304 aa5.89□□□□□ -1.47
SRP54-204ENST00000553923 WFDC12Q8WWY7 111 aa5.89□□□□□ -1.47
SRP54-204ENST00000553923 USP21Q9UK80 565 aa5.89□□□□□ -1.47
SRP54-204ENST00000553923 RNF112Q9ULX5 631 aa5.89□□□□□ -1.47
SRP54-204ENST00000553923 NFKB1P19838 968 aa5.88□□□□□ -1.47
SRP54-204ENST00000553923 HDGFL1Q5TGJ6 251 aa5.88□□□□□ -1.47
SRP54-204ENST00000553923 FRRS1LQ9P0K9 344 aa5.88□□□□□ -1.47
SRP54-204ENST00000553923 ZFATQ9P243 1243 aa5.88□□□□□ -1.47
SRP54-204ENST00000553923 TGFBR3LH3BV60 316 aa5.87□□□□□ -1.47
SRP54-204ENST00000553923 MAP3K6O95382 1288 aa5.87□□□□□ -1.47
SRP54-204ENST00000553923 INPP5BP32019 993 aa5.87□□□□□ -1.47
SRP54-204ENST00000553923 IREB2P48200 963 aaKnown RBP5.87□□□□□ -1.47
SRP54-204ENST00000553923 RTN1Q16799 776 aa5.87□□□□□ -1.47
SRP54-204ENST00000553923 PERM1Q5SV97 790 aa5.87□□□□□ -1.47
SRP54-204ENST00000553923 SCG3Q8WXD2 468 aaKnown RBP5.87□□□□□ -1.47
SRP54-204ENST00000553923 TTC9Q92623 222 aa5.87□□□□□ -1.47
SRP54-204ENST00000553923 MEGF10Q96KG7 1140 aa5.87□□□□□ -1.47
SRP54-204ENST00000553923 DEAF1O75398 565 aaPredicted RBP5.86□□□□□ -1.47
SRP54-204ENST00000553923 TPRNQ4KMQ1 711 aa5.86□□□□□ -1.47
SRP54-204ENST00000553923 FAM35AQ86V20 835 aa5.86□□□□□ -1.47
SRP54-204ENST00000553923 WWC1Q8IX03 1113 aa5.86□□□□□ -1.47
SRP54-204ENST00000553923 TRPM4Q8TD43 1214 aa5.86□□□□□ -1.47
SRP54-204ENST00000553923 NGLY1Q96IV0 654 aa5.86□□□□□ -1.47
SRP54-204ENST00000553923 ZNF594Q96JF6 807 aaPredicted RBP5.86□□□□□ -1.47
SRP54-204ENST00000553923 CPB1P15086 417 aa5.85□□□□□ -1.47
SRP54-204ENST00000553923 IGF2-ASQ6U949 168 aa5.85□□□□□ -1.47
SRP54-204ENST00000553923 PRR23CQ6ZRP0 262 aa5.85□□□□□ -1.47
SRP54-204ENST00000553923 DZIP1LQ8IYY4 767 aaKnown RBP5.85□□□□□ -1.47
SRP54-204ENST00000553923 IFT43Q96FT9 208 aa5.85□□□□□ -1.47
SRP54-204ENST00000553923 PNMA5Q96PV4 448 aa5.85□□□□□ -1.47
SRP54-204ENST00000553923 C11orf16Q9NQ32 467 aa5.85□□□□□ -1.47
SRP54-204ENST00000553923 DLL1O00548 723 aa5.84□□□□□ -1.47
SRP54-204ENST00000553923 TARSP26639 723 aaKnown RBP5.84□□□□□ -1.47
SRP54-204ENST00000553923 SEC13P55735 322 aa5.84□□□□□ -1.47
SRP54-204ENST00000553923 PCSK7Q16549 785 aa5.84□□□□□ -1.47
SRP54-204ENST00000553923 DHX32Q7L7V1 743 aaKnown RBP5.84□□□□□ -1.47
SRP54-204ENST00000553923 CHMP7Q8WUX9 453 aaPredicted RBP5.84□□□□□ -1.47
SRP54-204ENST00000553923 GOLGA2P5Q9HBQ8 144 aa5.84□□□□□ -1.47
SRP54-204ENST00000553923 SLC24A1O60721 1099 aa5.83□□□□□ -1.48
SRP54-204ENST00000553923 IGFBP4P22692 258 aa5.83□□□□□ -1.48
SRP54-204ENST00000553923 IDH3AP50213 366 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms