RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ZSWIM6Q9HCJ5 1215 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 CCDC39Q9UFE4 941 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 RBM8AQ9Y5S9 174 aaKnown RBP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 RRP9O43818 475 aaKnown RBP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 VPS53Q5VIR6 699 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 CREB3L3Q68CJ9 461 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 EDC3Q96F86 508 aaKnown RBP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 TPCN1Q9ULQ1 816 aa8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.32□□□□□ -1.08
LINC-ROR-201ENST00000553704 AMOTQ4VCS5 1084 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 EPHA10Q5JZY3 1008 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 UTYO14607 1347 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 COL15A1P39059 1388 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 MED23Q9ULK4 1368 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 GLI3P10071 1580 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 ARFGEF2Q9Y6D5 1785 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 VPS37CA5D8V6 355 aaPredicted RBP8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 PHF14O94880 888 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 CHGBP05060 677 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 PIP4K2AP48426 406 aaPredicted RBP8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 UBE2HP62256 183 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 FAM173BQ6P4H8 233 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 GIMAP6Q6P9H5 292 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 ZNF589Q86UQ0 364 aaPredicted RBP8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 LINS1Q8NG48 757 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 RUFY2Q8WXA3 655 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 JARID2Q92833 1246 aaPredicted RBP8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 EVI5LQ96CN4 794 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 ZNF830Q96NB3 372 aaPredicted RBP8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 FUCA2Q9BTY2 467 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 BOLA2Q9H3K6 86 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 CYP46A1Q9Y6A2 500 aa8.31□□□□□ -1.08
LINC-ROR-201ENST00000553704 ALS2Q96Q42 1657 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 SLC27A2O14975 620 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 AP5Z1O43299 807 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 MYL6BP14649 208 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 RBM10P98175 930 aaKnown RBP8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 CDC37L1Q7L3B6 337 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 ERC1Q8IUD2 1116 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 GPATCH3Q96I76 525 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 TM6SF1Q9BZW5 370 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 NDUFB9Q9Y6M9 179 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 LMTK3Q96Q04 1460 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 MEGF6O75095 1541 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 FERMT3Q86UX7 667 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 C17orf53Q8N3J3 647 aaPredicted RBP8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 MAP4K1Q92918 833 aa8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC-ROR-201ENST00000553704 JCADQ9P266 1359 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 ANKLE2Q86XL3 938 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 FSD1Q9BTV5 496 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 LAMA4Q16363 1823 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 KIF1AQ12756 1690 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 ERBB3P21860 1342 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 UQCRHLA0A096LP55 91 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 NEURL1BA8MQ27 555 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 ADCY5O95622 1261 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 UQCRHP07919 91 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 MCM5P33992 734 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 KCNJ4P48050 445 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 TTC6Q86TZ1 520 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 TTC12Q9H892 705 aaPredicted RBP8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 SH2B1Q9NRF2 756 aaPredicted RBP8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 SNRKQ9NRH2 765 aa8.29□□□□□ -1.08
LINC-ROR-201ENST00000553704 G3BP1Q13283 466 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 TOB2Q14106 344 aaPredicted RBP8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 XAGE3Q8WTP9 111 aa8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 MYD88Q99836 296 aa8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 ZC3H6P61129 1189 aaKnown RBP8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 ZNF790Q6PG37 636 aa8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 RIC3Q7Z5B4 369 aa8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 FAM184AQ8NB25 1140 aa8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 ZSCAN31Q96LW9 406 aaPredicted RBP8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 CHMP4AQ9BY43 222 aa8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 COL18A1P39060 1754 aa8.28□□□□□ -1.08
LINC-ROR-201ENST00000553704 ZNF609O15014 1411 aa8.27□□□□□ -1.08
LINC-ROR-201ENST00000553704 NPHP3Q7Z494 1330 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 LAMB4A4D0S4 1761 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 ZKSCAN1P17029 563 aaPredicted RBP8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 TERF1P54274 439 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 KIAA2012Q0VF49 1180 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 STK3Q13188 491 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 GCKRQ14397 625 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 CCDC129Q6ZRS4 1044 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 LRP10Q7Z4F1 713 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 DBNLQ9UJU6 430 aaKnown RBP8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 TJP1Q07157 1748 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 MYH15Q9Y2K3 1946 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 ADAMTSL3P82987 1691 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 LIG1P18858 919 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 RPS6KB1P23443 525 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 UVSSAQ2YD98 709 aa8.27□□□□□ -1.09
LINC-ROR-201ENST00000553704 COPS6Q7L5N1 327 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms