RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 BRPF1P55201 1214 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-202ENST00000553656 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.4
TUBB3-202ENST00000553656 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
TUBB3-202ENST00000553656 KIF13BQ9NQT8 1826 aa17.58■□□□□ 0.4
TUBB3-202ENST00000553656 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
TUBB3-202ENST00000553656 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
TUBB3-202ENST00000553656 NLGN2Q8NFZ4 835 aa17.57■□□□□ 0.4
TUBB3-202ENST00000553656 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
TUBB3-202ENST00000553656 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
TUBB3-202ENST00000553656 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
TUBB3-202ENST00000553656 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
TUBB3-202ENST00000553656 H0YIN7 160 aa17.56■□□□□ 0.4
TUBB3-202ENST00000553656 HSP90B1P14625 803 aaKnown RBP17.56■□□□□ 0.4
TUBB3-202ENST00000553656 FRAT1Q92837 279 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-202ENST00000553656 PXDNLA1KZ92 1463 aa17.56■□□□□ 0.4
TUBB3-202ENST00000553656 ABCC12Q96J65 1359 aa17.55■□□□□ 0.4
TUBB3-202ENST00000553656 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
TUBB3-202ENST00000553656 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
TUBB3-202ENST00000553656 BCAR3O75815 825 aa17.55■□□□□ 0.4
TUBB3-202ENST00000553656 IGKV5-2P06315 115 aa17.55■□□□□ 0.4
TUBB3-202ENST00000553656 CWF19L2Q2TBE0 894 aaKnown RBP17.55■□□□□ 0.4
TUBB3-202ENST00000553656 C2CD5Q86YS7 1000 aa17.55■□□□□ 0.4
TUBB3-202ENST00000553656 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
TUBB3-202ENST00000553656 A0A0G2JLW4 131 aa17.54■□□□□ 0.4
TUBB3-202ENST00000553656 DPEP1P16444 411 aa17.54■□□□□ 0.4
TUBB3-202ENST00000553656 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-202ENST00000553656 ARHGAP45Q92619 1136 aa17.54■□□□□ 0.4
TUBB3-202ENST00000553656 SRCIN1Q9C0H9 1055 aa17.54■□□□□ 0.4
TUBB3-202ENST00000553656 RCAN3Q9UKA8 241 aa17.54■□□□□ 0.4
TUBB3-202ENST00000553656 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
TUBB3-202ENST00000553656 CHRNA5P30532 468 aa17.53■□□□□ 0.4
TUBB3-202ENST00000553656 BEND3Q5T5X7 828 aa17.53■□□□□ 0.4
TUBB3-202ENST00000553656 FAM89AQ96GI7 184 aa17.53■□□□□ 0.4
TUBB3-202ENST00000553656 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
TUBB3-202ENST00000553656 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.4
TUBB3-202ENST00000553656 ALDH1L1O75891 902 aa17.52■□□□□ 0.4
TUBB3-202ENST00000553656 PCCAP05165 728 aaPredicted RBP17.52■□□□□ 0.4
TUBB3-202ENST00000553656 GCKRQ14397 625 aa17.52■□□□□ 0.4
TUBB3-202ENST00000553656 ZKSCAN2Q63HK3 967 aa17.52■□□□□ 0.4
TUBB3-202ENST00000553656 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
TUBB3-202ENST00000553656 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-202ENST00000553656 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-202ENST00000553656 HCLS1P14317 486 aaPredicted RBP17.51■□□□□ 0.39
TUBB3-202ENST00000553656 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
TUBB3-202ENST00000553656 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
TUBB3-202ENST00000553656 SRCAPQ6ZRS2 3230 aa17.51■□□□□ 0.39
TUBB3-202ENST00000553656 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
TUBB3-202ENST00000553656 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.39
TUBB3-202ENST00000553656 PIM2Q9P1W9 311 aa17.51■□□□□ 0.39
TUBB3-202ENST00000553656 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
TUBB3-202ENST00000553656 UBE3BQ7Z3V4 1068 aa17.5■□□□□ 0.39
TUBB3-202ENST00000553656 SYNE4Q8N205 404 aa17.5■□□□□ 0.39
TUBB3-202ENST00000553656 MASTLQ96GX5 879 aa17.5■□□□□ 0.39
TUBB3-202ENST00000553656 C9orf78Q9NZ63 289 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-202ENST00000553656 WWC3Q9ULE0 1092 aa17.5■□□□□ 0.39
TUBB3-202ENST00000553656 KIAA1551Q9HCM1 1747 aa17.5■□□□□ 0.39
TUBB3-202ENST00000553656 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
TUBB3-202ENST00000553656 SRGNP10124 158 aa17.49■□□□□ 0.39
TUBB3-202ENST00000553656 NPR1P16066 1061 aa17.49■□□□□ 0.39
TUBB3-202ENST00000553656 GPR162Q16538 588 aa17.49■□□□□ 0.39
TUBB3-202ENST00000553656 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
TUBB3-202ENST00000553656 FTSJ3Q8IY81 847 aaKnown RBP17.49■□□□□ 0.39
TUBB3-202ENST00000553656 JARID2Q92833 1246 aaPredicted RBP17.49■□□□□ 0.39
TUBB3-202ENST00000553656 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
TUBB3-202ENST00000553656 CDHR2Q9BYE9 1310 aa17.48■□□□□ 0.39
TUBB3-202ENST00000553656 COL11A2P13942 1736 aaPredicted RBP17.48■□□□□ 0.39
TUBB3-202ENST00000553656 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
TUBB3-202ENST00000553656 GRM8O00222 908 aa17.48■□□□□ 0.39
TUBB3-202ENST00000553656 TRIM27P14373 513 aa17.48■□□□□ 0.39
TUBB3-202ENST00000553656 DALRD3Q5D0E6 543 aaKnown RBP17.48■□□□□ 0.39
TUBB3-202ENST00000553656 BCS1LQ9Y276 419 aa17.48■□□□□ 0.39
TUBB3-202ENST00000553656 DLEC1Q9Y238 1755 aa17.48■□□□□ 0.39
TUBB3-202ENST00000553656 H7C1W4 665 aa17.47■□□□□ 0.39
TUBB3-202ENST00000553656 PDE8AO60658 829 aa17.47■□□□□ 0.39
TUBB3-202ENST00000553656 KCNA3P22001 575 aa17.47■□□□□ 0.39
TUBB3-202ENST00000553656 CRY2Q49AN0 593 aa17.47■□□□□ 0.39
TUBB3-202ENST00000553656 TTLL6Q8N841 843 aa17.47■□□□□ 0.39
TUBB3-202ENST00000553656 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.47■□□□□ 0.39
TUBB3-202ENST00000553656 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
TUBB3-202ENST00000553656 LAMB2P55268 1798 aa17.47■□□□□ 0.39
TUBB3-202ENST00000553656 ABCC4O15439 1325 aa17.47■□□□□ 0.39
TUBB3-202ENST00000553656 MS4A1P11836 297 aa17.46■□□□□ 0.39
TUBB3-202ENST00000553656 ALDH1B1P30837 517 aa17.46■□□□□ 0.39
TUBB3-202ENST00000553656 CLUAP1Q96AJ1 413 aa17.46■□□□□ 0.39
TUBB3-202ENST00000553656 DDX60Q8IY21 1712 aaKnown RBP17.46■□□□□ 0.39
TUBB3-202ENST00000553656 CCDC152Q4G0S7 254 aa17.45■□□□□ 0.38
TUBB3-202ENST00000553656 C3orf67Q6ZVT6 689 aa17.45■□□□□ 0.38
TUBB3-202ENST00000553656 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
TUBB3-202ENST00000553656 CTSWP56202 376 aa17.44■□□□□ 0.38
TUBB3-202ENST00000553656 SF3B3Q15393 1217 aaKnown RBP17.44■□□□□ 0.38
TUBB3-202ENST00000553656 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
TUBB3-202ENST00000553656 BRCA1P38398 1863 aaKnown RBP17.44■□□□□ 0.38
TUBB3-202ENST00000553656 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
TUBB3-202ENST00000553656 HOXA10P31260 410 aaPredicted RBP17.43■□□□□ 0.38
TUBB3-202ENST00000553656 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
TUBB3-202ENST00000553656 PRPF40BQ6NWY9 871 aaKnown RBP17.43■□□□□ 0.38
TUBB3-202ENST00000553656 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
TUBB3-202ENST00000553656 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
TUBB3-202ENST00000553656 YBX3P16989 372 aaKnown RBP eCLIP17.42■□□□□ 0.38
TUBB3-202ENST00000553656 CASP7P55210 303 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms