RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 PARP10Q53GL7 1025 aa15.06■□□□□ 0
CCNK-202ENST00000553636 PPP1R42Q7Z4L9 355 aa15.06■□□□□ 0
CCNK-202ENST00000553636 TAOK3Q9H2K8 898 aa15.06■□□□□ 0
CCNK-202ENST00000553636 DBF4Q9UBU7 674 aaPredicted RBP15.06■□□□□ 0
CCNK-202ENST00000553636 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
CCNK-202ENST00000553636 RIC1Q4ADV7 1423 aa15.06■□□□□ 0
CCNK-202ENST00000553636 LAMB2P55268 1798 aa15.06■□□□□ 0
CCNK-202ENST00000553636 HSP90AB3PQ58FF7 597 aa15.05■□□□□ -0
CCNK-202ENST00000553636 SOGA3Q5TF21 947 aa15.05■□□□□ -0
CCNK-202ENST00000553636 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
CCNK-202ENST00000553636 ZC3H4Q9UPT8 1303 aaKnown RBP15.05■□□□□ -0
CCNK-202ENST00000553636 LTBP3Q9NS15 1303 aa15.04■□□□□ -0
CCNK-202ENST00000553636 CRY2Q49AN0 593 aa15.04■□□□□ -0
CCNK-202ENST00000553636 CCDC93Q567U6 631 aa15.04■□□□□ -0
CCNK-202ENST00000553636 OLFM4Q6UX06 510 aa15.04■□□□□ -0
CCNK-202ENST00000553636 C8orf58Q8NAV2 365 aa15.04■□□□□ -0
CCNK-202ENST00000553636 TSR2Q969E8 191 aaKnown RBP15.04■□□□□ -0
CCNK-202ENST00000553636 ZNF428Q96B54 188 aa15.04■□□□□ -0
CCNK-202ENST00000553636 UTP14AQ9BVJ6 771 aaKnown RBP15.04■□□□□ -0
CCNK-202ENST00000553636 ALDH1B1P30837 517 aa15.03■□□□□ -0
CCNK-202ENST00000553636 TCIRG1Q13488 830 aa15.03■□□□□ -0
CCNK-202ENST00000553636 CCDC27Q2M243 656 aa15.03■□□□□ -0
CCNK-202ENST00000553636 C3orf67Q6ZVT6 689 aa15.03■□□□□ -0
CCNK-202ENST00000553636 NLRP10Q86W26 655 aa15.03■□□□□ -0
CCNK-202ENST00000553636 WWC1Q8IX03 1113 aa15.03■□□□□ -0
CCNK-202ENST00000553636 PLBD2Q8NHP8 589 aa15.03■□□□□ -0
CCNK-202ENST00000553636 C7orf43Q8WVR3 580 aa15.03■□□□□ -0
CCNK-202ENST00000553636 HYPKQ9NX55 129 aa15.03■□□□□ -0
CCNK-202ENST00000553636 SALL2Q9Y467 1007 aaPredicted RBP15.03■□□□□ -0
CCNK-202ENST00000553636 ANKRD13DQ6ZTN6 518 aa15.02■□□□□ -0
CCNK-202ENST00000553636 DDX60Q8IY21 1712 aaKnown RBP15.02□□□□□ -0.01
CCNK-202ENST00000553636 RNF123Q5XPI4 1314 aa15.01□□□□□ -0.01
CCNK-202ENST00000553636 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
CCNK-202ENST00000553636 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
CCNK-202ENST00000553636 RRAGCQ9HB90 399 aa15.01□□□□□ -0.01
CCNK-202ENST00000553636 TRMT112Q9UI30 125 aaKnown RBP15.01□□□□□ -0.01
CCNK-202ENST00000553636 GLTPD2A6NH11 291 aa15□□□□□ -0.01
CCNK-202ENST00000553636 ATP5J2-PTCD1G3V325 749 aa15□□□□□ -0.01
CCNK-202ENST00000553636 HCLS1P14317 486 aaPredicted RBP15□□□□□ -0.01
CCNK-202ENST00000553636 HOXA10P31260 410 aaPredicted RBP15□□□□□ -0.01
CCNK-202ENST00000553636 GOLGA2Q08379 1002 aa15□□□□□ -0.01
CCNK-202ENST00000553636 C16orf71Q8IYS4 520 aaPredicted RBP15□□□□□ -0.01
CCNK-202ENST00000553636 SYNE4Q8N205 404 aa15□□□□□ -0.01
CCNK-202ENST00000553636 TSPYL6Q8N831 410 aa15□□□□□ -0.01
CCNK-202ENST00000553636 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
CCNK-202ENST00000553636 PHAXQ9H814 394 aaKnown RBP15□□□□□ -0.01
CCNK-202ENST00000553636 SH3TC1Q8TE82 1336 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
CCNK-202ENST00000553636 TOMM70O94826 608 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
CCNK-202ENST00000553636 SLC10A5Q5PT55 438 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 CCDC30Q5VVM6 783 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 RIC3Q7Z5B4 369 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 SLC51AQ86UW1 340 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 RTKN2Q8IZC4 609 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 CRAMP1Q96RY5 1269 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 ISCA1Q9BUE6 129 aa14.99□□□□□ -0.01
CCNK-202ENST00000553636 ZNF277Q9NRM2 450 aaPredicted RBP14.99□□□□□ -0.01
CCNK-202ENST00000553636 IL16Q14005 1332 aa14.98□□□□□ -0.01
CCNK-202ENST00000553636 WDR90Q96KV7 1748 aa14.98□□□□□ -0.01
CCNK-202ENST00000553636 PPEF1O14829 653 aaPredicted RBP14.98□□□□□ -0.01
CCNK-202ENST00000553636 SNED1Q8TER0 1413 aa14.98□□□□□ -0.01
CCNK-202ENST00000553636 TAF1P21675 1872 aa14.97□□□□□ -0.01
CCNK-202ENST00000553636 FANCIQ9NVI1 1328 aa14.97□□□□□ -0.01
CCNK-202ENST00000553636 HSPA6P17066 643 aa14.97□□□□□ -0.01
CCNK-202ENST00000553636 TWISTNBQ3B726 338 aaPredicted RBP14.97□□□□□ -0.01
CCNK-202ENST00000553636 ABCC4O15439 1325 aa14.96□□□□□ -0.01
CCNK-202ENST00000553636 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.01
CCNK-202ENST00000553636 CC2D2BQ6DHV5 1058 aa14.96□□□□□ -0.01
CCNK-202ENST00000553636 DPY19L2Q6NUT2 758 aa14.96□□□□□ -0.01
CCNK-202ENST00000553636 FAM89AQ96GI7 184 aa14.96□□□□□ -0.01
CCNK-202ENST00000553636 CHMP4AQ9BY43 222 aa14.96□□□□□ -0.01
CCNK-202ENST00000553636 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
CCNK-202ENST00000553636 IARSP41252 1262 aaKnown RBP14.95□□□□□ -0.02
CCNK-202ENST00000553636 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
CCNK-202ENST00000553636 MYD88Q99836 296 aa14.95□□□□□ -0.02
CCNK-202ENST00000553636 STK31Q9BXU1 1019 aa14.95□□□□□ -0.02
CCNK-202ENST00000553636 DDNO94850 711 aaPredicted RBP14.94□□□□□ -0.02
CCNK-202ENST00000553636 DDX58O95786 925 aaKnown RBP14.94□□□□□ -0.02
CCNK-202ENST00000553636 DDX46Q7L014 1031 aaKnown RBP14.94□□□□□ -0.02
CCNK-202ENST00000553636 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
CCNK-202ENST00000553636 PSMD1Q99460 953 aa14.94□□□□□ -0.02
CCNK-202ENST00000553636 COL4A5P29400 1685 aa14.93□□□□□ -0.02
CCNK-202ENST00000553636 ZNF541Q9H0D2 1346 aa14.93□□□□□ -0.02
CCNK-202ENST00000553636 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
CCNK-202ENST00000553636 TMX4Q9H1E5 349 aaPredicted RBP14.93□□□□□ -0.02
CCNK-202ENST00000553636 ATP6V0A2Q9Y487 856 aa14.93□□□□□ -0.02
CCNK-202ENST00000553636 LRRC37AA6NMS7 1700 aa14.92□□□□□ -0.02
CCNK-202ENST00000553636 POTECB2RU33 542 aa14.92□□□□□ -0.02
CCNK-202ENST00000553636 IRS4O14654 1257 aaPredicted RBP14.92□□□□□ -0.02
CCNK-202ENST00000553636 G2E3Q7L622 706 aa14.92□□□□□ -0.02
CCNK-202ENST00000553636 MAP3K2Q9Y2U5 619 aa14.92□□□□□ -0.02
CCNK-202ENST00000553636 COL4A1P02462 1669 aa14.92□□□□□ -0.02
CCNK-202ENST00000553636 EXOSC9Q06265 439 aaKnown RBP14.91□□□□□ -0.02
CCNK-202ENST00000553636 FSTL1Q12841 308 aa14.91□□□□□ -0.02
CCNK-202ENST00000553636 GRAPQ13588 217 aa14.91□□□□□ -0.02
CCNK-202ENST00000553636 GRIPAP1Q4V328 841 aa14.91□□□□□ -0.02
CCNK-202ENST00000553636 SMC1BQ8NDV3 1235 aa14.91□□□□□ -0.02
CCNK-202ENST00000553636 GRAPLQ8TC17 118 aaPredicted RBP14.91□□□□□ -0.02
CCNK-202ENST00000553636 JDP2Q8WYK2 163 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms