RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 COL26A1Q96A83 441 aa12.79□□□□□ -0.36
PCNX1-205ENST00000553508 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
PCNX1-205ENST00000553508 OIP5O43482 229 aa12.78□□□□□ -0.36
PCNX1-205ENST00000553508 ARAFP10398 606 aa12.78□□□□□ -0.36
PCNX1-205ENST00000553508 SPEM2Q0P670 501 aa12.78□□□□□ -0.36
PCNX1-205ENST00000553508 ENAMQ9NRM1 1142 aa12.78□□□□□ -0.36
PCNX1-205ENST00000553508 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
PCNX1-205ENST00000553508 SSFA2P28290 1259 aa12.77□□□□□ -0.37
PCNX1-205ENST00000553508 SYT9Q86SS6 491 aa12.77□□□□□ -0.37
PCNX1-205ENST00000553508 TREML1Q86YW5 311 aa12.77□□□□□ -0.37
PCNX1-205ENST00000553508 RETREG2Q8NC44 543 aa12.77□□□□□ -0.37
PCNX1-205ENST00000553508 EDARADDQ8WWZ3 215 aa12.77□□□□□ -0.37
PCNX1-205ENST00000553508 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
PCNX1-205ENST00000553508 ZNF468Q5VIY5 522 aaPredicted RBP12.76□□□□□ -0.37
PCNX1-205ENST00000553508 SHISA8B8ZZ34 492 aa12.75□□□□□ -0.37
PCNX1-205ENST00000553508 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
PCNX1-205ENST00000553508 ADH6P28332 368 aa12.75□□□□□ -0.37
PCNX1-205ENST00000553508 INPP5BP32019 993 aa12.75□□□□□ -0.37
PCNX1-205ENST00000553508 KCNQ4P56696 695 aa12.75□□□□□ -0.37
PCNX1-205ENST00000553508 ARSDP51689 593 aa12.74□□□□□ -0.37
PCNX1-205ENST00000553508 MARSP56192 900 aaKnown RBP12.74□□□□□ -0.37
PCNX1-205ENST00000553508 FAM26DQ5JW98 314 aa12.74□□□□□ -0.37
PCNX1-205ENST00000553508 SLCO4C1Q6ZQN7 724 aa12.74□□□□□ -0.37
PCNX1-205ENST00000553508 ETFBKMTQ8IXQ9 262 aa12.74□□□□□ -0.37
PCNX1-205ENST00000553508 BHMTQ93088 406 aa12.74□□□□□ -0.37
PCNX1-205ENST00000553508 USTQ9Y2C2 406 aa12.74□□□□□ -0.37
PCNX1-205ENST00000553508 TNFRSF10BO14763 440 aa12.73□□□□□ -0.37
PCNX1-205ENST00000553508 FCHSD1Q86WN1 690 aa12.73□□□□□ -0.37
PCNX1-205ENST00000553508 OPLAHO14841 1288 aa12.72□□□□□ -0.37
PCNX1-205ENST00000553508 EPXP11678 715 aa12.72□□□□□ -0.37
PCNX1-205ENST00000553508 EPB42P16452 691 aa12.72□□□□□ -0.37
PCNX1-205ENST00000553508 AMPD1P23109 780 aa12.72□□□□□ -0.37
PCNX1-205ENST00000553508 GRNP28799 593 aaKnown RBP12.72□□□□□ -0.37
PCNX1-205ENST00000553508 PHLDB3Q6NSJ2 640 aa12.72□□□□□ -0.37
PCNX1-205ENST00000553508 RGL4Q8IZJ4 473 aa12.72□□□□□ -0.37
PCNX1-205ENST00000553508 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
PCNX1-205ENST00000553508 KRT25Q7Z3Z0 450 aa12.71□□□□□ -0.37
PCNX1-205ENST00000553508 CMTR1Q8N1G2 835 aaKnown RBP12.71□□□□□ -0.37
PCNX1-205ENST00000553508 IGFLR1Q9H665 355 aa12.71□□□□□ -0.37
PCNX1-205ENST00000553508 AVENQ9NQS1 362 aaPredicted RBP12.71□□□□□ -0.37
PCNX1-205ENST00000553508 PNMA5Q96PV4 448 aa12.7□□□□□ -0.38
PCNX1-205ENST00000553508 GSX2Q9BZM3 304 aa12.7□□□□□ -0.38
PCNX1-205ENST00000553508 RRAGCQ9HB90 399 aa12.7□□□□□ -0.38
PCNX1-205ENST00000553508 STIM2Q9P246 746 aa12.7□□□□□ -0.38
PCNX1-205ENST00000553508 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
PCNX1-205ENST00000553508 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
PCNX1-205ENST00000553508 CCINQ13939 588 aa12.69□□□□□ -0.38
PCNX1-205ENST00000553508 GTF3C2Q8WUA4 911 aaPredicted RBP12.69□□□□□ -0.38
PCNX1-205ENST00000553508 LRRC4BQ9NT99 713 aa12.69□□□□□ -0.38
PCNX1-205ENST00000553508 ZBTB39O15060 712 aa12.67□□□□□ -0.38
PCNX1-205ENST00000553508 MTMR3Q13615 1198 aa12.67□□□□□ -0.38
PCNX1-205ENST00000553508 BTBD6Q96KE9 485 aa12.67□□□□□ -0.38
PCNX1-205ENST00000553508 CNTNAP5Q8WYK1 1306 aa12.66□□□□□ -0.38
PCNX1-205ENST00000553508 SIN3BO75182 1162 aa12.66□□□□□ -0.38
PCNX1-205ENST00000553508 NFKB1P19838 968 aa12.66□□□□□ -0.38
PCNX1-205ENST00000553508 ZAP70P43403 619 aa12.66□□□□□ -0.38
PCNX1-205ENST00000553508 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.66□□□□□ -0.38
PCNX1-205ENST00000553508 SASH3O75995 380 aa12.65□□□□□ -0.38
PCNX1-205ENST00000553508 ABL1P00519 1130 aa12.65□□□□□ -0.38
PCNX1-205ENST00000553508 TARSP26639 723 aaKnown RBP12.65□□□□□ -0.38
PCNX1-205ENST00000553508 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
PCNX1-205ENST00000553508 ELOA3DA6NLF2 546 aaPredicted RBP12.64□□□□□ -0.39
PCNX1-205ENST00000553508 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
PCNX1-205ENST00000553508 ELOA3BQ3SY89 546 aa12.64□□□□□ -0.39
PCNX1-205ENST00000553508 ABTB2Q8N961 1025 aa12.64□□□□□ -0.39
PCNX1-205ENST00000553508 ELOA3Q8NG57 546 aa12.64□□□□□ -0.39
PCNX1-205ENST00000553508 HELQQ8TDG4 1101 aa12.64□□□□□ -0.39
PCNX1-205ENST00000553508 UBE2OQ9C0C9 1292 aaKnown RBP12.64□□□□□ -0.39
PCNX1-205ENST00000553508 ANO2Q9NQ90 1003 aa12.64□□□□□ -0.39
PCNX1-205ENST00000553508 XYLBO75191 536 aa12.63□□□□□ -0.39
PCNX1-205ENST00000553508 ALAS2P22557 587 aa12.63□□□□□ -0.39
PCNX1-205ENST00000553508 CHSY3Q70JA7 882 aa12.63□□□□□ -0.39
PCNX1-205ENST00000553508 ATCAYQ86WG3 371 aa12.63□□□□□ -0.39
PCNX1-205ENST00000553508 GPR152Q8TDT2 470 aa12.63□□□□□ -0.39
PCNX1-205ENST00000553508 MTMR7Q9Y216 660 aa12.63□□□□□ -0.39
PCNX1-205ENST00000553508 B4GALNT3Q6L9W6 998 aa12.62□□□□□ -0.39
PCNX1-205ENST00000553508 SCARF2Q96GP6 870 aaPredicted RBP12.62□□□□□ -0.39
PCNX1-205ENST00000553508 ADH7P40394 386 aa12.61□□□□□ -0.39
PCNX1-205ENST00000553508 PDE4CQ08493 712 aa12.61□□□□□ -0.39
PCNX1-205ENST00000553508 ZNF211Q13398 564 aaPredicted RBP12.61□□□□□ -0.39
PCNX1-205ENST00000553508 PODNQ7Z5L7 613 aa12.61□□□□□ -0.39
PCNX1-205ENST00000553508 PIK3R5Q8WYR1 880 aa12.61□□□□□ -0.39
PCNX1-205ENST00000553508 TNFRSF25Q93038 417 aa12.61□□□□□ -0.39
PCNX1-205ENST00000553508 ZFATQ9P243 1243 aa12.61□□□□□ -0.39
PCNX1-205ENST00000553508 KCNMB2Q9Y691 235 aa12.61□□□□□ -0.39
PCNX1-205ENST00000553508 RARAP10276 462 aa12.6□□□□□ -0.39
PCNX1-205ENST00000553508 MPSTP25325 297 aa12.6□□□□□ -0.39
PCNX1-205ENST00000553508 IRS1P35568 1242 aa12.6□□□□□ -0.39
PCNX1-205ENST00000553508 FAM13BQ9NYF5 915 aa12.6□□□□□ -0.39
PCNX1-205ENST00000553508 BEND7Q8N7W2 519 aaPredicted RBP12.59□□□□□ -0.39
PCNX1-205ENST00000553508 ADARB2-AS1A8MUL3 147 aa12.58□□□□□ -0.4
PCNX1-205ENST00000553508 AAMPQ13685 434 aa12.58□□□□□ -0.4
PCNX1-205ENST00000553508 TRIP4Q15650 581 aaPredicted RBP12.58□□□□□ -0.4
PCNX1-205ENST00000553508 NOM1Q5C9Z4 860 aaKnown RBP12.58□□□□□ -0.4
PCNX1-205ENST00000553508 MDFIQ99750 246 aa12.58□□□□□ -0.4
PCNX1-205ENST00000553508 EFCC1Q9HA90 598 aa12.58□□□□□ -0.4
PCNX1-205ENST00000553508 DNAJB12Q9NXW2 375 aaKnown RBP12.58□□□□□ -0.4
PCNX1-205ENST00000553508 UBAP1LF5GYI3 381 aa12.57□□□□□ -0.4
PCNX1-205ENST00000553508 ARID4AP29374 1257 aaPredicted RBP12.57□□□□□ -0.4
PCNX1-205ENST00000553508 MKL2Q9ULH7 1088 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms