RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 HEG1Q9ULI3 1381 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 WDR17Q8IZU2 1322 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 PTPN5P54829 565 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 KRT24Q2M2I5 525 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
ATXN3-221ENST00000553498 CHD1LQ86WJ1 897 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 UPF2Q9HAU5 1272 aaKnown RBP9.13□□□□□ -0.95
ATXN3-221ENST00000553498 DBF4Q9UBU7 674 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-221ENST00000553498 ADGRG1Q9Y653 693 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 LTN1O94822 1766 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 STRCQ7RTU9 1775 aa9.13□□□□□ -0.95
ATXN3-221ENST00000553498 PHKG2P15735 406 aa9.12□□□□□ -0.95
ATXN3-221ENST00000553498 FKBP5Q13451 457 aaPredicted RBP9.12□□□□□ -0.95
ATXN3-221ENST00000553498 TPRNQ4KMQ1 711 aa9.12□□□□□ -0.95
ATXN3-221ENST00000553498 DCTPP1Q9H773 170 aa9.12□□□□□ -0.95
ATXN3-221ENST00000553498 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
ATXN3-221ENST00000553498 PRDM11Q9NQV5 511 aa9.12□□□□□ -0.95
ATXN3-221ENST00000553498 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
ATXN3-221ENST00000553498 GNAI2P04899 355 aa9.11□□□□□ -0.95
ATXN3-221ENST00000553498 MPRIPQ6WCQ1 1025 aa9.11□□□□□ -0.95
ATXN3-221ENST00000553498 DDX17Q92841 729 aaKnown RBP9.11□□□□□ -0.95
ATXN3-221ENST00000553498 CARD10Q9BWT7 1032 aa9.11□□□□□ -0.95
ATXN3-221ENST00000553498 SLC52A2Q9HAB3 445 aa9.11□□□□□ -0.95
ATXN3-221ENST00000553498 PCDH11XQ9BZA7 1347 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 PCDH11YQ9BZA8 1340 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 GNPATO15228 680 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 GIGYF1O75420 1035 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-221ENST00000553498 BMP2KLQ5H9B9 411 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 CEP85Q6P2H3 762 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 ERICH6Q7L0X2 663 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 GPIHBP1Q8IV16 184 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 HYPKQ9NX55 129 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 ATP10DQ9P241 1426 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 ADAMTS7Q9UKP4 1686 aa9.1□□□□□ -0.95
ATXN3-221ENST00000553498 DLG5Q8TDM6 1919 aa9.09□□□□□ -0.95
ATXN3-221ENST00000553498 MRC1P22897 1456 aa9.09□□□□□ -0.95
ATXN3-221ENST00000553498 ERVV-2B6SEH9 535 aa9.09□□□□□ -0.95
ATXN3-221ENST00000553498 DDX58O95786 925 aaKnown RBP9.09□□□□□ -0.95
ATXN3-221ENST00000553498 ZNF790Q6PG37 636 aa9.09□□□□□ -0.95
ATXN3-221ENST00000553498 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
ATXN3-221ENST00000553498 CABLES1Q8TDN4 633 aa9.09□□□□□ -0.95
ATXN3-221ENST00000553498 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-221ENST00000553498 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 ALDH1L1O75891 902 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 ANKRD45Q5TZF3 282 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 TOM1L2Q6ZVM7 507 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 G2E3Q7L622 706 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 ZCRB1Q8TBF4 217 aaKnown RBP9.08□□□□□ -0.96
ATXN3-221ENST00000553498 LRCH3Q96II8 777 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 SRCIN1Q9C0H9 1055 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 DDX21Q9NR30 783 aaKnown RBP eCLIP9.08□□□□□ -0.96
ATXN3-221ENST00000553498 WBP1LQ9NX94 342 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 NOP58Q9Y2X3 529 aaKnown RBP9.08□□□□□ -0.96
ATXN3-221ENST00000553498 MEGF6O75095 1541 aa9.08□□□□□ -0.96
ATXN3-221ENST00000553498 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-221ENST00000553498 COL18A1P39060 1754 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 IL2RBP14784 551 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 CHRNA2Q15822 529 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 SLC4A10Q6U841 1118 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 TTC5Q8N0Z6 440 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 FMNL2Q96PY5 1086 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 MEIS3Q99687 375 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 CRYBG1Q9Y4K1 1723 aa9.07□□□□□ -0.96
ATXN3-221ENST00000553498 KDM6AO15550 1401 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-221ENST00000553498 CYP27B1O15528 508 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 SNRPA1P09661 255 aaKnown RBP9.06□□□□□ -0.96
ATXN3-221ENST00000553498 UBTFL1P0CB47 393 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-221ENST00000553498 CABP4P57796 275 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 EVA1CP58658 441 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 ATP8B2P98198 1209 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 HSP90AB4PQ58FF6 505 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 KSR2Q6VAB6 950 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 SKAP1Q86WV1 359 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 RBM46Q8TBY0 533 aaKnown RBP9.06□□□□□ -0.96
ATXN3-221ENST00000553498 PXYLP1Q8TE99 480 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 LNPKQ9C0E8 428 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 CHPF2Q9P2E5 772 aa9.06□□□□□ -0.96
ATXN3-221ENST00000553498 DAXXQ9UER7 740 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-221ENST00000553498 TSR3Q9UJK0 312 aaKnown RBP9.06□□□□□ -0.96
ATXN3-221ENST00000553498 NHSL1Q5SYE7 1610 aa9.05□□□□□ -0.96
ATXN3-221ENST00000553498 AHDC1Q5TGY3 1603 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-221ENST00000553498 F6X3S4 739 aa9.05□□□□□ -0.96
ATXN3-221ENST00000553498 RAB11FIP3O75154 756 aa9.05□□□□□ -0.96
ATXN3-221ENST00000553498 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
ATXN3-221ENST00000553498 SWT1Q5T5J6 900 aaKnown RBP9.05□□□□□ -0.96
ATXN3-221ENST00000553498 BEND3Q5T5X7 828 aa9.05□□□□□ -0.96
ATXN3-221ENST00000553498 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-221ENST00000553498 C1orf115Q9H7X2 142 aa9.05□□□□□ -0.96
ATXN3-221ENST00000553498 HPS5Q9UPZ3 1129 aa9.05□□□□□ -0.96
ATXN3-221ENST00000553498 XIRP1Q702N8 1843 aaKnown RBP9.05□□□□□ -0.96
ATXN3-221ENST00000553498 KDM3BQ7LBC6 1761 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 RCCD1A6NED2 376 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-221ENST00000553498 MTX1Q13505 466 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 BECN1Q14457 450 aa9.04□□□□□ -0.96
ATXN3-221ENST00000553498 LARP1Q6PKG0 1096 aaKnown RBP9.04□□□□□ -0.96
ATXN3-221ENST00000553498 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms