RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 NUTM1Q86Y26 1132 aa15.65■□□□□ 0.1
HNRNPC-206ENST00000553444 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
HNRNPC-206ENST00000553444 GPR101Q96P66 508 aaPredicted RBP15.65■□□□□ 0.1
HNRNPC-206ENST00000553444 CCDC85CA6NKD9 419 aa15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 TRAF5O00463 557 aa15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 HOXA10P31260 410 aaPredicted RBP15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 RGS19P49795 217 aa15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 CNGB1Q14028 1251 aaPredicted RBP15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 USP50Q70EL3 339 aaPredicted RBP15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 LARGE2Q8N3Y3 721 aa15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 BEGAINQ9BUH8 593 aa15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 NYXQ9GZU5 481 aa15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 TLL2Q9Y6L7 1015 aa15.64■□□□□ 0.09
HNRNPC-206ENST00000553444 MLLT1Q03111 559 aaPredicted RBP15.63■□□□□ 0.09
HNRNPC-206ENST00000553444 DCTN1Q14203 1278 aa15.63■□□□□ 0.09
HNRNPC-206ENST00000553444 GRIPAP1Q4V328 841 aa15.63■□□□□ 0.09
HNRNPC-206ENST00000553444 SLC51AQ86UW1 340 aa15.63■□□□□ 0.09
HNRNPC-206ENST00000553444 VIRMAQ69YN4 1812 aaKnown RBP15.63■□□□□ 0.09
HNRNPC-206ENST00000553444 ERVV-1B6SEH8 477 aa15.62■□□□□ 0.09
HNRNPC-206ENST00000553444 GRM1Q13255 1194 aa15.62■□□□□ 0.09
HNRNPC-206ENST00000553444 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
HNRNPC-206ENST00000553444 CFAP53Q96M91 514 aa15.62■□□□□ 0.09
HNRNPC-206ENST00000553444 RIC1Q4ADV7 1423 aa15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 AOC2O75106 756 aa15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 MAP2K2P36507 400 aa15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 NUDCQ9Y266 331 aa15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 MAP3K15Q6ZN16 1313 aa15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 IBTKQ9P2D0 1353 aaPredicted RBP15.61■□□□□ 0.09
HNRNPC-206ENST00000553444 LTBP1Q14766 1721 aa15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 U2AF1L5P0DN76 240 aaPredicted RBP15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 U2AF1Q01081 240 aaKnown RBP eCLIP15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 TAF7Q15545 349 aaPredicted RBP15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 NGEFQ8N5V2 710 aa15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 CRAMP1Q96RY5 1269 aa15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 ADARB2Q9NS39 739 aaKnown RBP15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 TSKSQ9UJT2 592 aa15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
HNRNPC-206ENST00000553444 SUSD4Q5VX71 490 aa15.59■□□□□ 0.09
HNRNPC-206ENST00000553444 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
HNRNPC-206ENST00000553444 SAPCD2Q86UD0 394 aa15.59■□□□□ 0.09
HNRNPC-206ENST00000553444 RBM17Q96I25 401 aaKnown RBP15.59■□□□□ 0.09
HNRNPC-206ENST00000553444 MIS18AQ9NYP9 233 aa15.59■□□□□ 0.09
HNRNPC-206ENST00000553444 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
HNRNPC-206ENST00000553444 PPIP5K2O43314 1243 aa15.58■□□□□ 0.08
HNRNPC-206ENST00000553444 CA12O43570 354 aa15.58■□□□□ 0.08
HNRNPC-206ENST00000553444 GPTP24298 496 aa15.58■□□□□ 0.08
HNRNPC-206ENST00000553444 TTLL7Q6ZT98 887 aa15.58■□□□□ 0.08
HNRNPC-206ENST00000553444 MCOLN1Q9GZU1 580 aa15.58■□□□□ 0.08
HNRNPC-206ENST00000553444 CACNA1SQ13698 1873 aa15.58■□□□□ 0.08
HNRNPC-206ENST00000553444 TCERG1O14776 1098 aaKnown RBP15.57■□□□□ 0.08
HNRNPC-206ENST00000553444 CELF2O95319 508 aaKnown RBP15.57■□□□□ 0.08
HNRNPC-206ENST00000553444 NTSR2O95665 410 aa15.57■□□□□ 0.08
HNRNPC-206ENST00000553444 AOC3Q16853 763 aa15.57■□□□□ 0.08
HNRNPC-206ENST00000553444 KIF6Q6ZMV9 814 aa15.57■□□□□ 0.08
HNRNPC-206ENST00000553444 HHIPL1Q96JK4 782 aa15.57■□□□□ 0.08
HNRNPC-206ENST00000553444 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 CXCL9Q07325 125 aa15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 ZNF34Q8IZ26 560 aa15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 GLIS2Q9BZE0 524 aaPredicted RBP15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 VPS33BQ9H267 617 aa15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 ZBTB3Q9H5J0 574 aa15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 ZNRF3Q9ULT6 936 aa15.56■□□□□ 0.08
HNRNPC-206ENST00000553444 GMPSP49915 693 aaPredicted RBP15.55■□□□□ 0.08
HNRNPC-206ENST00000553444 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
HNRNPC-206ENST00000553444 RTFDC1Q9BY42 306 aaPredicted RBP15.55■□□□□ 0.08
HNRNPC-206ENST00000553444 PGAP2Q9UHJ9 254 aa15.55■□□□□ 0.08
HNRNPC-206ENST00000553444 RRP7AQ9Y3A4 280 aaKnown RBP15.55■□□□□ 0.08
HNRNPC-206ENST00000553444 ATP6V0A2Q9Y487 856 aa15.55■□□□□ 0.08
HNRNPC-206ENST00000553444 MYL6BP14649 208 aa15.54■□□□□ 0.08
HNRNPC-206ENST00000553444 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
HNRNPC-206ENST00000553444 ABCC4O15439 1325 aa15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 CDHR2Q9BYE9 1310 aa15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 PPP2R1AP30153 589 aa15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 GIGYF2Q6Y7W6 1299 aaKnown RBP15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 SUPT20HQ8NEM7 779 aa15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 ZC3H15Q8WU90 426 aaKnown RBP15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 NLRP3Q96P20 1036 aa15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 PCDH10Q9P2E7 1040 aa15.53■□□□□ 0.08
HNRNPC-206ENST00000553444 HIRAP54198 1017 aaPredicted RBP15.52■□□□□ 0.08
HNRNPC-206ENST00000553444 PARP10Q53GL7 1025 aa15.52■□□□□ 0.08
HNRNPC-206ENST00000553444 CIAPIN1Q6FI81 312 aa15.52■□□□□ 0.08
HNRNPC-206ENST00000553444 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
HNRNPC-206ENST00000553444 TRPM4Q8TD43 1214 aa15.52■□□□□ 0.08
HNRNPC-206ENST00000553444 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
HNRNPC-206ENST00000553444 KIAA2012Q0VF49 1180 aa15.51■□□□□ 0.07
HNRNPC-206ENST00000553444 DGKZQ13574 1117 aa15.51■□□□□ 0.07
HNRNPC-206ENST00000553444 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
HNRNPC-206ENST00000553444 DPP8Q6V1X1 898 aaPredicted RBP15.51■□□□□ 0.07
HNRNPC-206ENST00000553444 CDC37L1Q7L3B6 337 aa15.51■□□□□ 0.07
HNRNPC-206ENST00000553444 ZNF408Q9H9D4 720 aa15.51■□□□□ 0.07
HNRNPC-206ENST00000553444 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
HNRNPC-206ENST00000553444 RAD17O75943 681 aa15.5■□□□□ 0.07
HNRNPC-206ENST00000553444 NOGQ13253 232 aa15.5■□□□□ 0.07
HNRNPC-206ENST00000553444 LRP10Q7Z4F1 713 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms