RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 NSD2O96028 1365 aa11.09□□□□□ -0.63
LINC02407-202ENST00000553247 PER1O15534 1290 aaPredicted RBP11.09□□□□□ -0.63
LINC02407-202ENST00000553247 R3HDM1Q15032 1099 aaKnown RBP11.09□□□□□ -0.63
LINC02407-202ENST00000553247 DDX54Q8TDD1 881 aaKnown RBP11.09□□□□□ -0.63
LINC02407-202ENST00000553247 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
LINC02407-202ENST00000553247 WNT7AO00755 349 aa11.08□□□□□ -0.64
LINC02407-202ENST00000553247 TXNRD1Q16881 649 aa11.08□□□□□ -0.64
LINC02407-202ENST00000553247 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
LINC02407-202ENST00000553247 RAPGEF4Q8WZA2 1011 aa11.08□□□□□ -0.64
LINC02407-202ENST00000553247 ADAMTS8Q9UP79 889 aa11.08□□□□□ -0.64
LINC02407-202ENST00000553247 KNSTRNQ9Y448 316 aa11.08□□□□□ -0.64
LINC02407-202ENST00000553247 SMG6Q86US8 1419 aaKnown RBP11.08□□□□□ -0.64
LINC02407-202ENST00000553247 TATP17735 454 aaPredicted RBP11.07□□□□□ -0.64
LINC02407-202ENST00000553247 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
LINC02407-202ENST00000553247 KAT6BQ8WYB5 2073 aa11.07□□□□□ -0.64
LINC02407-202ENST00000553247 RGPD3A6NKT7 1758 aaPredicted RBP11.06□□□□□ -0.64
LINC02407-202ENST00000553247 RGPD4Q7Z3J3 1758 aa11.06□□□□□ -0.64
LINC02407-202ENST00000553247 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
LINC02407-202ENST00000553247 VSIG8P0DPA2 414 aa11.06□□□□□ -0.64
LINC02407-202ENST00000553247 MORC1Q86VD1 984 aa11.06□□□□□ -0.64
LINC02407-202ENST00000553247 USHBP1Q8N6Y0 703 aa11.06□□□□□ -0.64
LINC02407-202ENST00000553247 ACSBG1Q96GR2 724 aa11.06□□□□□ -0.64
LINC02407-202ENST00000553247 EYA1Q99502 592 aa11.06□□□□□ -0.64
LINC02407-202ENST00000553247 FCF1Q9Y324 198 aaKnown RBP11.06□□□□□ -0.64
LINC02407-202ENST00000553247 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
LINC02407-202ENST00000553247 MEGF6O75095 1541 aa11.05□□□□□ -0.64
LINC02407-202ENST00000553247 RREB1Q92766 1687 aa11.05□□□□□ -0.64
LINC02407-202ENST00000553247 PRIM1P49642 420 aaKnown RBP11.05□□□□□ -0.64
LINC02407-202ENST00000553247 NKX1-1Q15270 411 aaPredicted RBP11.05□□□□□ -0.64
LINC02407-202ENST00000553247 RGPD2P0DJD1 1756 aa11.04□□□□□ -0.64
LINC02407-202ENST00000553247 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
LINC02407-202ENST00000553247 EIF4A2Q14240 407 aaKnown RBP11.04□□□□□ -0.64
LINC02407-202ENST00000553247 ANKRD26Q9UPS8 1709 aa11.04□□□□□ -0.64
LINC02407-202ENST00000553247 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
LINC02407-202ENST00000553247 CYP27B1O15528 508 aa11.03□□□□□ -0.64
LINC02407-202ENST00000553247 SLC27A3Q5K4L6 730 aa11.03□□□□□ -0.64
LINC02407-202ENST00000553247 SPSB2Q99619 263 aa11.03□□□□□ -0.64
LINC02407-202ENST00000553247 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
LINC02407-202ENST00000553247 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
LINC02407-202ENST00000553247 NHSQ6T4R5 1651 aa11.02□□□□□ -0.64
LINC02407-202ENST00000553247 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
LINC02407-202ENST00000553247 SPG7Q9UQ90 795 aa11.02□□□□□ -0.65
LINC02407-202ENST00000553247 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.65
LINC02407-202ENST00000553247 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.65
LINC02407-202ENST00000553247 BTBD11A6QL63 1104 aa11.01□□□□□ -0.65
LINC02407-202ENST00000553247 YY1P25490 414 aa11.01□□□□□ -0.65
LINC02407-202ENST00000553247 HMGB2P26583 209 aaKnown RBP11.01□□□□□ -0.65
LINC02407-202ENST00000553247 CAMK2BQ13554 666 aa11.01□□□□□ -0.65
LINC02407-202ENST00000553247 SCUBE3Q8IX30 993 aa11.01□□□□□ -0.65
LINC02407-202ENST00000553247 LRRC4BQ9NT99 713 aa11.01□□□□□ -0.65
LINC02407-202ENST00000553247 STK32BQ9NY57 414 aa11.01□□□□□ -0.65
LINC02407-202ENST00000553247 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
LINC02407-202ENST00000553247 UTRNP46939 3433 aa11□□□□□ -0.65
LINC02407-202ENST00000553247 ZBTB24O43167 697 aaPredicted RBP11□□□□□ -0.65
LINC02407-202ENST00000553247 IL13P35225 146 aa11□□□□□ -0.65
LINC02407-202ENST00000553247 Q8N3U1 123 aa11□□□□□ -0.65
LINC02407-202ENST00000553247 MRGPRX2Q96LB1 330 aa11□□□□□ -0.65
LINC02407-202ENST00000553247 SPON1Q9HCB6 807 aa11□□□□□ -0.65
LINC02407-202ENST00000553247 SHANK3Q9BYB0 1731 aa10.99□□□□□ -0.65
LINC02407-202ENST00000553247 IFNL2Q8IZJ0 200 aa10.99□□□□□ -0.65
LINC02407-202ENST00000553247 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
LINC02407-202ENST00000553247 SYTL4Q96C24 671 aaPredicted RBP10.99□□□□□ -0.65
LINC02407-202ENST00000553247 BTAF1O14981 1849 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 PHKG2P15735 406 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 IRS1P35568 1242 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 MTHFSP49914 203 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 AMOTQ4VCS5 1084 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 TRIM46Q7Z4K8 759 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 KRTAP9-9Q9BYP9 154 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 KRTAP9-4Q9BYQ2 154 aa10.98□□□□□ -0.65
LINC02407-202ENST00000553247 PDGFDQ9GZP0 370 aaPredicted RBP10.98□□□□□ -0.65
LINC02407-202ENST00000553247 PLEKHO1Q53GL0 409 aaPredicted RBP10.97□□□□□ -0.65
LINC02407-202ENST00000553247 PIGBQ92521 554 aa10.97□□□□□ -0.65
LINC02407-202ENST00000553247 SMARCC1Q92922 1105 aaPredicted RBP10.97□□□□□ -0.65
LINC02407-202ENST00000553247 KDRP35968 1356 aa10.96□□□□□ -0.65
LINC02407-202ENST00000553247 CFHP08603 1231 aa10.96□□□□□ -0.65
LINC02407-202ENST00000553247 BMP1P13497 986 aa10.96□□□□□ -0.65
LINC02407-202ENST00000553247 MPRIPQ6WCQ1 1025 aa10.96□□□□□ -0.65
LINC02407-202ENST00000553247 PKD1L3Q7Z443 1732 aa10.95□□□□□ -0.66
LINC02407-202ENST00000553247 ERVV-2B6SEH9 535 aa10.95□□□□□ -0.66
LINC02407-202ENST00000553247 HSP90AB1P08238 724 aaKnown RBP10.95□□□□□ -0.66
LINC02407-202ENST00000553247 ZNF827Q17R98 1081 aa10.95□□□□□ -0.66
LINC02407-202ENST00000553247 CC2D1BQ5T0F9 858 aaKnown RBP10.95□□□□□ -0.66
LINC02407-202ENST00000553247 SULT6B1Q6IMI4 303 aa10.95□□□□□ -0.66
LINC02407-202ENST00000553247 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
LINC02407-202ENST00000553247 KRTAP4-12Q9BQ66 201 aa10.95□□□□□ -0.66
LINC02407-202ENST00000553247 MTFR1LQ9H019 292 aa10.95□□□□□ -0.66
LINC02407-202ENST00000553247 CCNL1Q9UK58 526 aaPredicted RBP10.95□□□□□ -0.66
LINC02407-202ENST00000553247 KRTAP4-8A0A0G2JLE6 195 aa10.94□□□□□ -0.66
LINC02407-202ENST00000553247 AEBP1Q8IUX7 1158 aa10.94□□□□□ -0.66
LINC02407-202ENST00000553247 PAPPAQ13219 1627 aa10.94□□□□□ -0.66
LINC02407-202ENST00000553247 DIAPH1O60610 1272 aaKnown RBP10.93□□□□□ -0.66
LINC02407-202ENST00000553247 KCNQ4P56696 695 aa10.93□□□□□ -0.66
LINC02407-202ENST00000553247 KANK3Q6NY19 840 aa10.93□□□□□ -0.66
LINC02407-202ENST00000553247 CASZ1Q86V15 1759 aa10.93□□□□□ -0.66
LINC02407-202ENST00000553247 LY75O60449 1722 aa10.92□□□□□ -0.66
LINC02407-202ENST00000553247 DOT1LQ8TEK3 1739 aa10.92□□□□□ -0.66
LINC02407-202ENST00000553247 ZBTB7AO95365 584 aa10.92□□□□□ -0.66
LINC02407-202ENST00000553247 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
LINC02407-202ENST00000553247 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms