RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 AMOTQ4VCS5 1084 aa8.83□□□□□ -1
BEST3-212ENST00000553096 ZNF622Q969S3 477 aaKnown RBP eCLIP8.83□□□□□ -1
BEST3-212ENST00000553096 TMX3Q96JJ7 454 aa8.83□□□□□ -1
BEST3-212ENST00000553096 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
BEST3-212ENST00000553096 LRRFIP2Q9Y608 721 aaKnown RBP8.83□□□□□ -1
BEST3-212ENST00000553096 IL17RAQ96F46 866 aa8.83□□□□□ -1
BEST3-212ENST00000553096 NUP188Q5SRE5 1749 aa8.82□□□□□ -1
BEST3-212ENST00000553096 HOXB7P09629 217 aa8.82□□□□□ -1
BEST3-212ENST00000553096 NEK4P51957 841 aa8.82□□□□□ -1
BEST3-212ENST00000553096 ATP8B2P98198 1209 aa8.82□□□□□ -1
BEST3-212ENST00000553096 TEFQ10587 303 aa8.82□□□□□ -1
BEST3-212ENST00000553096 TSHZ3Q63HK5 1081 aa8.82□□□□□ -1
BEST3-212ENST00000553096 SPATA31A3Q5VYP0 1347 aa8.82□□□□□ -1
BEST3-212ENST00000553096 WDR33Q9C0J8 1336 aaKnown RBP8.82□□□□□ -1
BEST3-212ENST00000553096 CHRNA2Q15822 529 aa8.81□□□□□ -1
BEST3-212ENST00000553096 C1orf141Q5JVX7 400 aa8.81□□□□□ -1
BEST3-212ENST00000553096 BEND3Q5T5X7 828 aa8.81□□□□□ -1
BEST3-212ENST00000553096 MYRIPQ8NFW9 859 aa8.81□□□□□ -1
BEST3-212ENST00000553096 PHLPP1O60346 1717 aa8.81□□□□□ -1
BEST3-212ENST00000553096 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
BEST3-212ENST00000553096 PDE1AP54750 535 aa8.81□□□□□ -1
BEST3-212ENST00000553096 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.81□□□□□ -1
BEST3-212ENST00000553096 NUTM2BA6NNL0 878 aaPredicted RBP8.81□□□□□ -1
BEST3-212ENST00000553096 NUTM2EB1AL46 878 aaPredicted RBP8.81□□□□□ -1
BEST3-212ENST00000553096 NBPF7P0C2Y1 421 aaPredicted RBP8.81□□□□□ -1
BEST3-212ENST00000553096 NUTM2AQ8IVF1 878 aaPredicted RBP8.81□□□□□ -1
BEST3-212ENST00000553096 ESYT1Q9BSJ8 1104 aa8.81□□□□□ -1
BEST3-212ENST00000553096 SRCIN1Q9C0H9 1055 aa8.81□□□□□ -1
BEST3-212ENST00000553096 NPHP3Q7Z494 1330 aa8.8□□□□□ -1
BEST3-212ENST00000553096 CPDO75976 1380 aa8.8□□□□□ -1
BEST3-212ENST00000553096 TJP1Q07157 1748 aa8.8□□□□□ -1
BEST3-212ENST00000553096 PI4KAP2A4QPH2 592 aa8.8□□□□□ -1
BEST3-212ENST00000553096 GNAI3P08754 354 aa8.8□□□□□ -1
BEST3-212ENST00000553096 PI4KAP1Q8N8J0 262 aa8.8□□□□□ -1
BEST3-212ENST00000553096 TMEM87AQ8NBN3 555 aa8.8□□□□□ -1
BEST3-212ENST00000553096 PIBF1Q8WXW3 757 aa8.8□□□□□ -1
BEST3-212ENST00000553096 CCDC94Q9BW85 323 aaPredicted RBP8.8□□□□□ -1
BEST3-212ENST00000553096 TPM3P06753 285 aa8.8□□□□□ -1
BEST3-212ENST00000553096 PHKG2P15735 406 aa8.8□□□□□ -1
BEST3-212ENST00000553096 POLA2Q14181 598 aa8.8□□□□□ -1
BEST3-212ENST00000553096 PDIA6Q15084 440 aa8.8□□□□□ -1
BEST3-212ENST00000553096 DNTTIP2Q5QJE6 756 aaKnown RBP8.8□□□□□ -1
BEST3-212ENST00000553096 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.8□□□□□ -1
BEST3-212ENST00000553096 AOX1Q06278 1338 aa8.8□□□□□ -1
BEST3-212ENST00000553096 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -1
BEST3-212ENST00000553096 SLC39A6Q13433 755 aa8.79□□□□□ -1
BEST3-212ENST00000553096 CCDC183Q5T5S1 534 aa8.79□□□□□ -1
BEST3-212ENST00000553096 RNF214Q8ND24 703 aa8.79□□□□□ -1
BEST3-212ENST00000553096 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
BEST3-212ENST00000553096 SSH3Q8TE77 659 aa8.79□□□□□ -1
BEST3-212ENST00000553096 NLRP2Q9NX02 1062 aa8.79□□□□□ -1
BEST3-212ENST00000553096 NSFL1CQ9UNZ2 370 aaKnown RBP8.79□□□□□ -1
BEST3-212ENST00000553096 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
BEST3-212ENST00000553096 CYP27B1O15528 508 aa8.78□□□□□ -1
BEST3-212ENST00000553096 UBTFL1P0CB47 393 aaPredicted RBP8.78□□□□□ -1
BEST3-212ENST00000553096 ATP6V1DQ9Y5K8 247 aa8.78□□□□□ -1
BEST3-212ENST00000553096 COL5A2P05997 1499 aaPredicted RBP8.78□□□□□ -1
BEST3-212ENST00000553096 COL16A1Q07092 1604 aaPredicted RBP8.78□□□□□ -1
BEST3-212ENST00000553096 ITGB4P16144 1822 aa8.78□□□□□ -1
BEST3-212ENST00000553096 ZBTB22O15209 634 aa8.78□□□□□ -1
BEST3-212ENST00000553096 UTP14CQ5TAP6 766 aaKnown RBP8.78□□□□□ -1
BEST3-212ENST00000553096 PPP1R42Q7Z4L9 355 aa8.78□□□□□ -1
BEST3-212ENST00000553096 CHMP4CQ96CF2 233 aa8.78□□□□□ -1
BEST3-212ENST00000553096 LRRCC1Q9C099 1032 aa8.78□□□□□ -1
BEST3-212ENST00000553096 SLC52A2Q9HAB3 445 aa8.78□□□□□ -1
BEST3-212ENST00000553096 JCADQ9P266 1359 aa8.78□□□□□ -1
BEST3-212ENST00000553096 KCPQ6ZWJ8 1503 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 MX1P20591 662 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 NOLC1Q14978 699 aaKnown RBP eCLIP8.77□□□□□ -1.01
BEST3-212ENST00000553096 UNC5CLQ8IV45 518 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
BEST3-212ENST00000553096 STAP2Q9UGK3 403 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 MAP3K2Q9Y2U5 619 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
BEST3-212ENST00000553096 CHMLP26374 656 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 CWF19L2Q2TBE0 894 aaKnown RBP8.77□□□□□ -1.01
BEST3-212ENST00000553096 FOXD4L5Q5VV16 416 aaPredicted RBP8.77□□□□□ -1.01
BEST3-212ENST00000553096 ZNF790Q6PG37 636 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 LRP10Q7Z4F1 713 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 NFATC2IPQ8NCF5 419 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 FOXD4L4Q8WXT5 416 aaPredicted RBP8.77□□□□□ -1.01
BEST3-212ENST00000553096 RAPGEF4Q8WZA2 1011 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 ANO2Q9NQ90 1003 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 SPTLC3Q9NUV7 552 aa8.77□□□□□ -1.01
BEST3-212ENST00000553096 AHDC1Q5TGY3 1603 aaPredicted RBP8.77□□□□□ -1.01
BEST3-212ENST00000553096 PLEKHG2Q9H7P9 1386 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
BEST3-212ENST00000553096 UBE2HP62256 183 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 DMTNQ08495 405 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 USP48Q86UV5 1035 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 DIAPH3Q9NSV4 1193 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 CHAF1AQ13111 956 aaPredicted RBP8.76□□□□□ -1.01
BEST3-212ENST00000553096 KAZALD1Q96I82 304 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 IL25Q9H293 177 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 IL1RAPL2Q9NP60 686 aa8.76□□□□□ -1.01
BEST3-212ENST00000553096 GOLGA6L6A8MZA4 724 aa8.75□□□□□ -1.01
BEST3-212ENST00000553096 PRR29P0C7W0 189 aa8.75□□□□□ -1.01
BEST3-212ENST00000553096 AXDND1Q5T1B0 1012 aaPredicted RBP8.75□□□□□ -1.01
BEST3-212ENST00000553096 MEX3CQ5U5Q3 659 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms