RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 NTSR2O95665 410 aa9.87□□□□□ -0.83
NPAS3-213ENST00000552874 MMP10P09238 476 aa9.87□□□□□ -0.83
NPAS3-213ENST00000552874 ISCA1Q9BUE6 129 aa9.87□□□□□ -0.83
NPAS3-213ENST00000552874 SPON1Q9HCB6 807 aa9.87□□□□□ -0.83
NPAS3-213ENST00000552874 ZNF330Q9Y3S2 320 aaPredicted RBP9.87□□□□□ -0.83
NPAS3-213ENST00000552874 ZPR1O75312 459 aa9.86□□□□□ -0.83
NPAS3-213ENST00000552874 IGKV5-2P06315 115 aa9.86□□□□□ -0.83
NPAS3-213ENST00000552874 KIF6Q6ZMV9 814 aa9.86□□□□□ -0.83
NPAS3-213ENST00000552874 NLGN1Q8N2Q7 840 aa9.86□□□□□ -0.83
NPAS3-213ENST00000552874 BCL2L13Q9BXK5 485 aa9.86□□□□□ -0.83
NPAS3-213ENST00000552874 STK31Q9BXU1 1019 aa9.86□□□□□ -0.83
NPAS3-213ENST00000552874 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
NPAS3-213ENST00000552874 AIMP1Q12904 312 aaKnown RBP9.85□□□□□ -0.83
NPAS3-213ENST00000552874 TRIM28Q13263 835 aaKnown RBP9.85□□□□□ -0.83
NPAS3-213ENST00000552874 PRR5LQ6MZQ0 368 aa9.85□□□□□ -0.83
NPAS3-213ENST00000552874 CHMP4AQ9BY43 222 aa9.85□□□□□ -0.83
NPAS3-213ENST00000552874 ABCC4O15439 1325 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 PTPRCP08575 1304 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 PI4KAP2A4QPH2 592 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 BCAR3O75815 825 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 TCIRG1Q13488 830 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 KSR2Q6VAB6 950 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 ANKRD13DQ6ZTN6 518 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 NLRP10Q86W26 655 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 PI4KAP1Q8N8J0 262 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
NPAS3-213ENST00000552874 YTHDC1Q96MU7 727 aaKnown RBP9.84□□□□□ -0.83
NPAS3-213ENST00000552874 ARXQ96QS3 562 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 METTL22Q9BUU2 404 aaPredicted RBP9.84□□□□□ -0.83
NPAS3-213ENST00000552874 TNNQ9UQP3 1299 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 NIP7Q9Y221 180 aaKnown RBP eCLIP9.84□□□□□ -0.83
NPAS3-213ENST00000552874 ZNF652Q9Y2D9 606 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 TIAM2Q8IVF5 1701 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 PSME4Q14997 1843 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 DUOX1Q9NRD9 1551 aa9.84□□□□□ -0.83
NPAS3-213ENST00000552874 RNF123Q5XPI4 1314 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 F6X3S4 739 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 GPTP24298 496 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 CASP7P55210 303 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 SUSD4Q5VX71 490 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 DNAAF4Q8WXU2 420 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 SMC4Q9NTJ3 1288 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 MAP3K2Q9Y2U5 619 aa9.83□□□□□ -0.84
NPAS3-213ENST00000552874 KIF16BQ96L93 1317 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 ARAP2Q8WZ64 1704 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 KLRG2A4D1S0 409 aaPredicted RBP9.82□□□□□ -0.84
NPAS3-213ENST00000552874 NEURL1BA8MQ27 555 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 SERPINB2P05120 415 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 FKBP5Q13451 457 aaPredicted RBP9.82□□□□□ -0.84
NPAS3-213ENST00000552874 PARP10Q53GL7 1025 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 HSP90AB3PQ58FF7 597 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 BEND3Q5T5X7 828 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 NLGN2Q8NFZ4 835 aa9.82□□□□□ -0.84
NPAS3-213ENST00000552874 ATP5J2-PTCD1G3V325 749 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 PRKAR2AP13861 404 aaKnown RBP9.81□□□□□ -0.84
NPAS3-213ENST00000552874 TRIM27P14373 513 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 POLD1P28340 1107 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 SYNE4Q8N205 404 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 ARHGAP45Q92619 1136 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 SETDB2Q96T68 719 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 MYD88Q99836 296 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 FHDC1Q9C0D6 1143 aaPredicted RBP9.81□□□□□ -0.84
NPAS3-213ENST00000552874 PARP3Q9Y6F1 533 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 UTYO14607 1347 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 CDHR2Q9BYE9 1310 aa9.81□□□□□ -0.84
NPAS3-213ENST00000552874 HAX1O00165 279 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 DDX58O95786 925 aaKnown RBP9.8□□□□□ -0.84
NPAS3-213ENST00000552874 KCNA3P22001 575 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 CWF19L2Q2TBE0 894 aaKnown RBP9.8□□□□□ -0.84
NPAS3-213ENST00000552874 CRY2Q49AN0 593 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 RIC3Q7Z5B4 369 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 CNBD1Q8NA66 436 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 CCDC191Q8NCU4 936 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 LINS1Q8NG48 757 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 NOB1Q9ULX3 412 aaKnown RBP9.8□□□□□ -0.84
NPAS3-213ENST00000552874 CD2APQ9Y5K6 639 aa9.8□□□□□ -0.84
NPAS3-213ENST00000552874 PCCAP05165 728 aaPredicted RBP9.79□□□□□ -0.84
NPAS3-213ENST00000552874 RLBP1P12271 317 aa9.79□□□□□ -0.84
NPAS3-213ENST00000552874 GCKRQ14397 625 aa9.79□□□□□ -0.84
NPAS3-213ENST00000552874 SLC10A5Q5PT55 438 aa9.79□□□□□ -0.84
NPAS3-213ENST00000552874 CCDC24Q8N4L8 307 aa9.79□□□□□ -0.84
NPAS3-213ENST00000552874 SYT17Q9BSW7 474 aa9.79□□□□□ -0.84
NPAS3-213ENST00000552874 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 MYH13Q9UKX3 1938 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 ATF7IPQ6VMQ6 1270 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 NPM2Q86SE8 214 aaKnown RBP9.78□□□□□ -0.84
NPAS3-213ENST00000552874 NBPF5PQ86XG9 351 aaPredicted RBP9.78□□□□□ -0.84
NPAS3-213ENST00000552874 KAZALD1Q96I82 304 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 BRIP1Q9BX63 1249 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 NYXQ9GZU5 481 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 CWC25Q9NXE8 425 aaPredicted RBP9.78□□□□□ -0.84
NPAS3-213ENST00000552874 RCAN3Q9UKA8 241 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 SH3TC1Q8TE82 1336 aa9.78□□□□□ -0.84
NPAS3-213ENST00000552874 SCN9AQ15858 1988 aa9.77□□□□□ -0.84
NPAS3-213ENST00000552874 H7C1W4 665 aa9.77□□□□□ -0.85
NPAS3-213ENST00000552874 ALDH1L1O75891 902 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms