RNA–Protein interactions for RNA: ENST00000552856.1

AC078923.1-201, humanhuman

TSL 3 BASIC

Gene AC078923.1, Length 748 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078923.1-201ENST00000552856 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
AC078923.1-201ENST00000552856 IFT57Q9NWB7 429 aa16.5■□□□□ 0.23
AC078923.1-201ENST00000552856 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
AC078923.1-201ENST00000552856 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
AC078923.1-201ENST00000552856 ZNF428Q96B54 188 aa16.49■□□□□ 0.23
AC078923.1-201ENST00000552856 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
AC078923.1-201ENST00000552856 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
AC078923.1-201ENST00000552856 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
AC078923.1-201ENST00000552856 CCDC93Q567U6 631 aa16.48■□□□□ 0.23
AC078923.1-201ENST00000552856 SLC10A5Q5PT55 438 aa16.48■□□□□ 0.23
AC078923.1-201ENST00000552856 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
AC078923.1-201ENST00000552856 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
AC078923.1-201ENST00000552856 ANKRD36CQ5JPF3 1778 aa16.47■□□□□ 0.23
AC078923.1-201ENST00000552856 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
AC078923.1-201ENST00000552856 GNAI1P63096 354 aa16.47■□□□□ 0.23
AC078923.1-201ENST00000552856 SOGA3Q5TF21 947 aa16.47■□□□□ 0.23
AC078923.1-201ENST00000552856 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
AC078923.1-201ENST00000552856 RBM46Q8TBY0 533 aaKnown RBP16.47■□□□□ 0.23
AC078923.1-201ENST00000552856 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
AC078923.1-201ENST00000552856 FKBP4Q02790 459 aaKnown RBP eCLIP16.46■□□□□ 0.23
AC078923.1-201ENST00000552856 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
AC078923.1-201ENST00000552856 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
AC078923.1-201ENST00000552856 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 PHAXQ9H814 394 aaKnown RBP16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
AC078923.1-201ENST00000552856 COL4A5P29400 1685 aa16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 VEGFAP15692 232 aaPredicted RBP16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 HSP90AB3PQ58FF7 597 aa16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 TSR2Q969E8 191 aaKnown RBP16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 NLRP3Q96P20 1036 aa16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 CRAMP1Q96RY5 1269 aa16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 CEP350Q5VT06 3117 aa16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 WDR90Q96KV7 1748 aa16.44■□□□□ 0.22
AC078923.1-201ENST00000552856 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 TCERG1O14776 1098 aaKnown RBP16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 ANP32CO43423 234 aa16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 CALD1Q05682 793 aaKnown RBP16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 RTKN2Q8IZC4 609 aa16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 TRMT112Q9UI30 125 aaKnown RBP16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 LAMB2P55268 1798 aa16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 ZNF541Q9H0D2 1346 aa16.43■□□□□ 0.22
AC078923.1-201ENST00000552856 HTRA3P83110 453 aa16.42■□□□□ 0.22
AC078923.1-201ENST00000552856 DPY19L2Q6NUT2 758 aa16.42■□□□□ 0.22
AC078923.1-201ENST00000552856 C16orf71Q8IYS4 520 aaPredicted RBP16.42■□□□□ 0.22
AC078923.1-201ENST00000552856 RBM17Q96I25 401 aaKnown RBP16.42■□□□□ 0.22
AC078923.1-201ENST00000552856 ABCC4O15439 1325 aa16.42■□□□□ 0.22
AC078923.1-201ENST00000552856 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
AC078923.1-201ENST00000552856 SH3TC1Q8TE82 1336 aa16.42■□□□□ 0.22
AC078923.1-201ENST00000552856 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
AC078923.1-201ENST00000552856 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
AC078923.1-201ENST00000552856 PSMD1Q99460 953 aa16.41■□□□□ 0.22
AC078923.1-201ENST00000552856 COL4A1P02462 1669 aa16.4■□□□□ 0.22
AC078923.1-201ENST00000552856 POTEIP0CG38 1075 aa16.4■□□□□ 0.22
AC078923.1-201ENST00000552856 POTEJP0CG39 1038 aa16.4■□□□□ 0.22
AC078923.1-201ENST00000552856 FSTL1Q12841 308 aa16.4■□□□□ 0.22
AC078923.1-201ENST00000552856 CC2D2BQ6DHV5 1058 aa16.4■□□□□ 0.22
AC078923.1-201ENST00000552856 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
AC078923.1-201ENST00000552856 FAM89AQ96GI7 184 aa16.4■□□□□ 0.22
AC078923.1-201ENST00000552856 FZD9O00144 591 aa16.39■□□□□ 0.21
AC078923.1-201ENST00000552856 APLP1P51693 650 aa16.39■□□□□ 0.21
AC078923.1-201ENST00000552856 RTL5Q5HYW3 569 aaPredicted RBP16.39■□□□□ 0.21
AC078923.1-201ENST00000552856 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
AC078923.1-201ENST00000552856 TAF1P21675 1872 aa16.39■□□□□ 0.21
AC078923.1-201ENST00000552856 DDX60Q8IY21 1712 aaKnown RBP16.39■□□□□ 0.21
AC078923.1-201ENST00000552856 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
AC078923.1-201ENST00000552856 SMC1BQ8NDV3 1235 aa16.38■□□□□ 0.21
AC078923.1-201ENST00000552856 SALL2Q9Y467 1007 aaPredicted RBP16.38■□□□□ 0.21
AC078923.1-201ENST00000552856 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
AC078923.1-201ENST00000552856 RIC3Q7Z5B4 369 aa16.37■□□□□ 0.21
AC078923.1-201ENST00000552856 L3MBTL3Q96JM7 780 aaPredicted RBP16.37■□□□□ 0.21
AC078923.1-201ENST00000552856 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
AC078923.1-201ENST00000552856 G2E3Q7L622 706 aa16.36■□□□□ 0.21
AC078923.1-201ENST00000552856 MYD88Q99836 296 aa16.36■□□□□ 0.21
AC078923.1-201ENST00000552856 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
AC078923.1-201ENST00000552856 IL16Q14005 1332 aa16.36■□□□□ 0.21
AC078923.1-201ENST00000552856 BBOX1O75936 387 aa16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 GRAPQ13588 217 aa16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 TAF1DQ9H5J8 278 aaPredicted RBP16.35■□□□□ 0.21
AC078923.1-201ENST00000552856 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
AC078923.1-201ENST00000552856 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
AC078923.1-201ENST00000552856 RTFDC1Q9BY42 306 aaPredicted RBP16.34■□□□□ 0.21
AC078923.1-201ENST00000552856 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
AC078923.1-201ENST00000552856 IRS4O14654 1257 aaPredicted RBP16.33■□□□□ 0.2
AC078923.1-201ENST00000552856 AOC3Q16853 763 aa16.33■□□□□ 0.2
AC078923.1-201ENST00000552856 GRIPAP1Q4V328 841 aa16.33■□□□□ 0.2
AC078923.1-201ENST00000552856 DDX46Q7L014 1031 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms