RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 DDX21Q9NR30 783 aaKnown RBP eCLIP18.09■□□□□ 0.49
LETMD1-235ENST00000552739 DDX19BQ9UMR2 479 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 PDZRN3Q9UPQ7 1066 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 ARFGEF2Q9Y6D5 1785 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 ANXA1P04083 346 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 PRR5LQ6MZQ0 368 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 CHPF2Q9P2E5 772 aa18.09■□□□□ 0.49
LETMD1-235ENST00000552739 KIF16BQ96L93 1317 aa18.08■□□□□ 0.48
LETMD1-235ENST00000552739 KCNA3P22001 575 aa18.08■□□□□ 0.48
LETMD1-235ENST00000552739 SLC4A3P48751 1232 aa18.08■□□□□ 0.48
LETMD1-235ENST00000552739 TSR2Q969E8 191 aaKnown RBP18.08■□□□□ 0.48
LETMD1-235ENST00000552739 GRIN3BO60391 1043 aa18.07■□□□□ 0.48
LETMD1-235ENST00000552739 ALDH1L2Q3SY69 923 aa18.07■□□□□ 0.48
LETMD1-235ENST00000552739 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
LETMD1-235ENST00000552739 ZBTB3Q9H5J0 574 aa18.07■□□□□ 0.48
LETMD1-235ENST00000552739 WWC3Q9ULE0 1092 aa18.07■□□□□ 0.48
LETMD1-235ENST00000552739 NIP7Q9Y221 180 aaKnown RBP eCLIP18.07■□□□□ 0.48
LETMD1-235ENST00000552739 TNRC6CQ9HCJ0 1690 aaKnown RBP18.07■□□□□ 0.48
LETMD1-235ENST00000552739 FTSJ3Q8IY81 847 aaKnown RBP18.06■□□□□ 0.48
LETMD1-235ENST00000552739 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
LETMD1-235ENST00000552739 DBF4Q9UBU7 674 aaPredicted RBP18.06■□□□□ 0.48
LETMD1-235ENST00000552739 CACNA1SQ13698 1873 aa18.06■□□□□ 0.48
LETMD1-235ENST00000552739 CHRNA5P30532 468 aa18.06■□□□□ 0.48
LETMD1-235ENST00000552739 IBTKQ9P2D0 1353 aaPredicted RBP18.05■□□□□ 0.48
LETMD1-235ENST00000552739 ATF7IPQ6VMQ6 1270 aa18.05■□□□□ 0.48
LETMD1-235ENST00000552739 GIGYF2Q6Y7W6 1299 aaKnown RBP18.05■□□□□ 0.48
LETMD1-235ENST00000552739 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
LETMD1-235ENST00000552739 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-235ENST00000552739 IPO8O15397 1037 aaKnown RBP18.04■□□□□ 0.48
LETMD1-235ENST00000552739 COPS6Q7L5N1 327 aa18.04■□□□□ 0.48
LETMD1-235ENST00000552739 NBPF5PQ86XG9 351 aaPredicted RBP18.04■□□□□ 0.48
LETMD1-235ENST00000552739 SMC5Q8IY18 1101 aa18.04■□□□□ 0.48
LETMD1-235ENST00000552739 BRIP1Q9BX63 1249 aa18.04■□□□□ 0.48
LETMD1-235ENST00000552739 PIM2Q9P1W9 311 aa18.04■□□□□ 0.48
LETMD1-235ENST00000552739 UBN2Q6ZU65 1347 aa18.04■□□□□ 0.48
LETMD1-235ENST00000552739 SEC24BO95487 1268 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 ST5P78524 1137 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 TRIM27P14373 513 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 YY1P25490 414 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 CCDC24Q8N4L8 307 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 CHMP4BQ9H444 224 aaKnown RBP18.03■□□□□ 0.48
LETMD1-235ENST00000552739 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 BCS1LQ9Y276 419 aa18.03■□□□□ 0.48
LETMD1-235ENST00000552739 CACNA1FO60840 1977 aa18.02■□□□□ 0.48
LETMD1-235ENST00000552739 RIC1Q4ADV7 1423 aa18.02■□□□□ 0.48
LETMD1-235ENST00000552739 NPHP1O15259 732 aa18.02■□□□□ 0.48
LETMD1-235ENST00000552739 PDE6BP35913 854 aa18.02■□□□□ 0.48
LETMD1-235ENST00000552739 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.48
LETMD1-235ENST00000552739 AIMP1Q12904 312 aaKnown RBP18.02■□□□□ 0.48
LETMD1-235ENST00000552739 C2CD5Q86YS7 1000 aa18.02■□□□□ 0.48
LETMD1-235ENST00000552739 ZNF34Q8IZ26 560 aa18.02■□□□□ 0.48
LETMD1-235ENST00000552739 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
LETMD1-235ENST00000552739 FRAT2O75474 233 aaPredicted RBP18.01■□□□□ 0.47
LETMD1-235ENST00000552739 TPTE2Q6XPS3 522 aa18.01■□□□□ 0.47
LETMD1-235ENST00000552739 SSH1Q8WYL5 1049 aa18.01■□□□□ 0.47
LETMD1-235ENST00000552739 H0YIN7 160 aa18.01■□□□□ 0.47
LETMD1-235ENST00000552739 GPTP24298 496 aa18.01■□□□□ 0.47
LETMD1-235ENST00000552739 DALRD3Q5D0E6 543 aaKnown RBP18.01■□□□□ 0.47
LETMD1-235ENST00000552739 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
LETMD1-235ENST00000552739 CHMP4AQ9BY43 222 aa18.01■□□□□ 0.47
LETMD1-235ENST00000552739 LAMB2P55268 1798 aa18■□□□□ 0.47
LETMD1-235ENST00000552739 ABCC12Q96J65 1359 aa18■□□□□ 0.47
LETMD1-235ENST00000552739 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
LETMD1-235ENST00000552739 CCDC30Q5VVM6 783 aa18■□□□□ 0.47
LETMD1-235ENST00000552739 NYXQ9GZU5 481 aa18■□□□□ 0.47
LETMD1-235ENST00000552739 FAM177BA6PVY3 158 aa17.99■□□□□ 0.47
LETMD1-235ENST00000552739 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
LETMD1-235ENST00000552739 PLBD2Q8NHP8 589 aa17.99■□□□□ 0.47
LETMD1-235ENST00000552739 PARP10Q53GL7 1025 aa17.98■□□□□ 0.47
LETMD1-235ENST00000552739 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
LETMD1-235ENST00000552739 ZBTB40Q9NUA8 1239 aa17.98■□□□□ 0.47
LETMD1-235ENST00000552739 NTSR2O95665 410 aa17.98■□□□□ 0.47
LETMD1-235ENST00000552739 SUSD4Q5VX71 490 aa17.98■□□□□ 0.47
LETMD1-235ENST00000552739 SLX4Q8IY92 1834 aa17.98■□□□□ 0.47
LETMD1-235ENST00000552739 DDX60Q8IY21 1712 aaKnown RBP17.97■□□□□ 0.47
LETMD1-235ENST00000552739 KLRG2A4D1S0 409 aaPredicted RBP17.97■□□□□ 0.47
LETMD1-235ENST00000552739 SBF1O95248 1867 aa17.97■□□□□ 0.47
LETMD1-235ENST00000552739 ANKRD13DQ6ZTN6 518 aa17.97■□□□□ 0.47
LETMD1-235ENST00000552739 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
LETMD1-235ENST00000552739 SRGNP10124 158 aa17.96■□□□□ 0.47
LETMD1-235ENST00000552739 TCIRG1Q13488 830 aa17.96■□□□□ 0.47
LETMD1-235ENST00000552739 PPP1R42Q7Z4L9 355 aa17.96■□□□□ 0.47
LETMD1-235ENST00000552739 NUTM1Q86Y26 1132 aa17.96■□□□□ 0.47
LETMD1-235ENST00000552739 TTLL6Q8N841 843 aa17.96■□□□□ 0.47
LETMD1-235ENST00000552739 FER1L6Q2WGJ9 1857 aa17.96■□□□□ 0.47
LETMD1-235ENST00000552739 GTF2E1P29083 439 aaPredicted RBP17.95■□□□□ 0.46
LETMD1-235ENST00000552739 ERFEQ4G0M1 354 aa17.95■□□□□ 0.46
LETMD1-235ENST00000552739 STYK1Q6J9G0 422 aa17.95■□□□□ 0.46
LETMD1-235ENST00000552739 TBC1D2Q9BYX2 928 aa17.95■□□□□ 0.46
LETMD1-235ENST00000552739 ADCY9O60503 1353 aa17.95■□□□□ 0.46
LETMD1-235ENST00000552739 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
LETMD1-235ENST00000552739 STK31Q9BXU1 1019 aa17.95■□□□□ 0.46
LETMD1-235ENST00000552739 ITPRIPQ8IWB1 547 aa17.94■□□□□ 0.46
LETMD1-235ENST00000552739 IL27Q8NEV9 243 aa17.94■□□□□ 0.46
LETMD1-235ENST00000552739 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.46
LETMD1-235ENST00000552739 MASTLQ96GX5 879 aa17.94■□□□□ 0.46
LETMD1-235ENST00000552739 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms