RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ARFGEF1Q9Y6D6 1849 aa23.66■■□□□ 1.38
PRPF40B-216ENST00000552301 ATP5J2-PTCD1G3V325 749 aa23.65■■□□□ 1.38
PRPF40B-216ENST00000552301 STYK1Q6J9G0 422 aa23.65■■□□□ 1.38
PRPF40B-216ENST00000552301 CNKSR1Q969H4 720 aa23.65■■□□□ 1.38
PRPF40B-216ENST00000552301 MASTLQ96GX5 879 aa23.65■■□□□ 1.38
PRPF40B-216ENST00000552301 TRMT112Q9UI30 125 aaKnown RBP23.65■■□□□ 1.38
PRPF40B-216ENST00000552301 SRGNP10124 158 aa23.64■■□□□ 1.37
PRPF40B-216ENST00000552301 CDCA7LQ96GN5 454 aa23.64■■□□□ 1.37
PRPF40B-216ENST00000552301 MYD88Q99836 296 aa23.64■■□□□ 1.37
PRPF40B-216ENST00000552301 ISCA1Q9BUE6 129 aa23.64■■□□□ 1.37
PRPF40B-216ENST00000552301 RIC1Q4ADV7 1423 aa23.64■■□□□ 1.37
PRPF40B-216ENST00000552301 SH3TC1Q8TE82 1336 aa23.63■■□□□ 1.37
PRPF40B-216ENST00000552301 NPR1P16066 1061 aa23.63■■□□□ 1.37
PRPF40B-216ENST00000552301 FLIIQ13045 1269 aa23.63■■□□□ 1.37
PRPF40B-216ENST00000552301 FKBP5Q13451 457 aaPredicted RBP23.63■■□□□ 1.37
PRPF40B-216ENST00000552301 KSR2Q6VAB6 950 aa23.63■■□□□ 1.37
PRPF40B-216ENST00000552301 ARHGAP27Q6ZUM4 889 aa23.63■■□□□ 1.37
PRPF40B-216ENST00000552301 MAP3K2Q9Y2U5 619 aa23.63■■□□□ 1.37
PRPF40B-216ENST00000552301 PI4KAP2A4QPH2 592 aa23.62■■□□□ 1.37
PRPF40B-216ENST00000552301 NEXNQ0ZGT2 675 aa23.62■■□□□ 1.37
PRPF40B-216ENST00000552301 G2E3Q7L622 706 aa23.62■■□□□ 1.37
PRPF40B-216ENST00000552301 PI4KAP1Q8N8J0 262 aa23.62■■□□□ 1.37
PRPF40B-216ENST00000552301 METTL22Q9BUU2 404 aaPredicted RBP23.62■■□□□ 1.37
PRPF40B-216ENST00000552301 TNRC6CQ9HCJ0 1690 aaKnown RBP23.62■■□□□ 1.37
PRPF40B-216ENST00000552301 KLRG2A4D1S0 409 aaPredicted RBP23.61■■□□□ 1.37
PRPF40B-216ENST00000552301 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
PRPF40B-216ENST00000552301 TRIM28Q13263 835 aaKnown RBP23.6■■□□□ 1.37
PRPF40B-216ENST00000552301 ZNF428Q96B54 188 aa23.6■■□□□ 1.37
PRPF40B-216ENST00000552301 NLRP3Q96P20 1036 aa23.6■■□□□ 1.37
PRPF40B-216ENST00000552301 PRPF40BQ6NWY9 871 aaKnown RBP23.59■■□□□ 1.37
PRPF40B-216ENST00000552301 ADCY9O60503 1353 aa23.59■■□□□ 1.37
PRPF40B-216ENST00000552301 CACNA1SQ13698 1873 aa23.58■■□□□ 1.37
PRPF40B-216ENST00000552301 CCDC191Q8NCU4 936 aa23.58■■□□□ 1.37
PRPF40B-216ENST00000552301 CWC25Q9NXE8 425 aaPredicted RBP23.58■■□□□ 1.37
PRPF40B-216ENST00000552301 ZNF219Q9P2Y4 722 aaPredicted RBP23.58■■□□□ 1.37
PRPF40B-216ENST00000552301 ALDH1B1P30837 517 aa23.57■■□□□ 1.36
PRPF40B-216ENST00000552301 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
PRPF40B-216ENST00000552301 SLC10A5Q5PT55 438 aa23.57■■□□□ 1.36
PRPF40B-216ENST00000552301 HCLS1P14317 486 aaPredicted RBP23.56■■□□□ 1.36
PRPF40B-216ENST00000552301 DNAAF4Q8WXU2 420 aa23.56■■□□□ 1.36
PRPF40B-216ENST00000552301 RBM17Q96I25 401 aaKnown RBP23.56■■□□□ 1.36
PRPF40B-216ENST00000552301 C21orf2O43822 256 aa23.55■■□□□ 1.36
PRPF40B-216ENST00000552301 CT47B1P0C2W7 299 aaPredicted RBP23.55■■□□□ 1.36
PRPF40B-216ENST00000552301 HSP90B1P14625 803 aaKnown RBP23.55■■□□□ 1.36
PRPF40B-216ENST00000552301 RTL5Q5HYW3 569 aaPredicted RBP23.55■■□□□ 1.36
PRPF40B-216ENST00000552301 SOGA3Q5TF21 947 aa23.55■■□□□ 1.36
PRPF40B-216ENST00000552301 TRMT2AQ8IZ69 625 aaKnown RBP23.55■■□□□ 1.36
PRPF40B-216ENST00000552301 FAM89AQ96GI7 184 aa23.55■■□□□ 1.36
PRPF40B-216ENST00000552301 SLX4Q8IY92 1834 aa23.54■■□□□ 1.36
PRPF40B-216ENST00000552301 SYNE4Q8N205 404 aa23.54■■□□□ 1.36
PRPF40B-216ENST00000552301 ZBTB38Q8NAP3 1195 aaPredicted RBP23.54■■□□□ 1.36
PRPF40B-216ENST00000552301 IRS4O14654 1257 aaPredicted RBP23.53■■□□□ 1.36
PRPF40B-216ENST00000552301 C3orf67Q6ZVT6 689 aa23.53■■□□□ 1.36
PRPF40B-216ENST00000552301 GOLGB1Q14789 3259 aaKnown RBP23.52■■□□□ 1.36
PRPF40B-216ENST00000552301 PCCAP05165 728 aaPredicted RBP23.52■■□□□ 1.36
PRPF40B-216ENST00000552301 HOXA10P31260 410 aaPredicted RBP23.52■■□□□ 1.36
PRPF40B-216ENST00000552301 IGKV5-2P06315 115 aa23.51■■□□□ 1.35
PRPF40B-216ENST00000552301 CWF19L2Q2TBE0 894 aaKnown RBP23.51■■□□□ 1.35
PRPF40B-216ENST00000552301 SSH1Q8WYL5 1049 aa23.51■■□□□ 1.35
PRPF40B-216ENST00000552301 CRAMP1Q96RY5 1269 aa23.51■■□□□ 1.35
PRPF40B-216ENST00000552301 SMC4Q9NTJ3 1288 aa23.51■■□□□ 1.35
PRPF40B-216ENST00000552301 ZBED9Q6R2W3 1325 aa23.51■■□□□ 1.35
PRPF40B-216ENST00000552301 NEURL1BA8MQ27 555 aa23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 ALDH1L2Q3SY69 923 aa23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 CCDC93Q567U6 631 aa23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 DDX46Q7L014 1031 aaKnown RBP23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 MRPL50Q8N5N7 158 aaKnown RBP23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 LINS1Q8NG48 757 aa23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 BCL2L13Q9BXK5 485 aa23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 DDX60Q8IY21 1712 aaKnown RBP23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 LAMB2P55268 1798 aa23.5■■□□□ 1.35
PRPF40B-216ENST00000552301 F6X3S4 739 aa23.49■■□□□ 1.35
PRPF40B-216ENST00000552301 RASSF7Q02833 373 aa23.49■■□□□ 1.35
PRPF40B-216ENST00000552301 TMX4Q9H1E5 349 aaPredicted RBP23.49■■□□□ 1.35
PRPF40B-216ENST00000552301 C9orf131Q5VYM1 1079 aa23.48■■□□□ 1.35
PRPF40B-216ENST00000552301 TAOK3Q9H2K8 898 aa23.48■■□□□ 1.35
PRPF40B-216ENST00000552301 RNF181Q9P0P0 153 aa23.48■■□□□ 1.35
PRPF40B-216ENST00000552301 PPEF1O14829 653 aaPredicted RBP23.47■■□□□ 1.35
PRPF40B-216ENST00000552301 SLC4A10Q6U841 1118 aa23.47■■□□□ 1.35
PRPF40B-216ENST00000552301 JARID2Q92833 1246 aaPredicted RBP23.47■■□□□ 1.35
PRPF40B-216ENST00000552301 ABCC4O15439 1325 aa23.47■■□□□ 1.35
PRPF40B-216ENST00000552301 PTPRCP08575 1304 aa23.47■■□□□ 1.35
PRPF40B-216ENST00000552301 NFKBIEO00221 500 aa23.46■■□□□ 1.35
PRPF40B-216ENST00000552301 LMNB1P20700 586 aa23.46■■□□□ 1.35
PRPF40B-216ENST00000552301 CC2D2BQ6DHV5 1058 aa23.46■■□□□ 1.35
PRPF40B-216ENST00000552301 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
PRPF40B-216ENST00000552301 PDE8AO60658 829 aa23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 GCKRQ14397 625 aa23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 SF3B3Q15393 1217 aaKnown RBP23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 UBE3BQ7Z3V4 1068 aa23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 RTKN2Q8IZC4 609 aa23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 ZNF784Q8NCA9 323 aaPredicted RBP23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 C7orf43Q8WVR3 580 aa23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 FER1L6Q2WGJ9 1857 aa23.45■■□□□ 1.34
PRPF40B-216ENST00000552301 GRAPQ13588 217 aa23.44■■□□□ 1.34
PRPF40B-216ENST00000552301 CCDC152Q4G0S7 254 aa23.44■■□□□ 1.34
PRPF40B-216ENST00000552301 GRAPLQ8TC17 118 aaPredicted RBP23.44■■□□□ 1.34
PRPF40B-216ENST00000552301 LTBP3Q9NS15 1303 aa23.43■■□□□ 1.34
PRPF40B-216ENST00000552301 BBOX1O75936 387 aa23.43■■□□□ 1.34
PRPF40B-216ENST00000552301 BEND3Q5T5X7 828 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 622.4 ms