RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 FAM117AQ9C073 453 aa11.2□□□□□ -0.62
BEST3-211ENST00000552295 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
BEST3-211ENST00000552295 AMOTL2Q9Y2J4 779 aa11.2□□□□□ -0.62
BEST3-211ENST00000552295 ADGRB2O60241 1585 aa11.2□□□□□ -0.62
BEST3-211ENST00000552295 SLC35F4A4IF30 521 aa11.19□□□□□ -0.62
BEST3-211ENST00000552295 WAPLQ7Z5K2 1190 aa11.19□□□□□ -0.62
BEST3-211ENST00000552295 INSM2Q96T92 566 aaPredicted RBP11.19□□□□□ -0.62
BEST3-211ENST00000552295 POLMQ9NP87 494 aaPredicted RBP11.19□□□□□ -0.62
BEST3-211ENST00000552295 MYOM1P52179 1685 aa11.19□□□□□ -0.62
BEST3-211ENST00000552295 KCNA6P17658 529 aa11.18□□□□□ -0.62
BEST3-211ENST00000552295 TMF1P82094 1093 aa11.18□□□□□ -0.62
BEST3-211ENST00000552295 SAFB2Q14151 953 aaKnown RBP eCLIP11.18□□□□□ -0.62
BEST3-211ENST00000552295 POGKQ9P215 609 aa11.18□□□□□ -0.62
BEST3-211ENST00000552295 NKTRP30414 1462 aaKnown RBP11.18□□□□□ -0.62
BEST3-211ENST00000552295 ITGA6P23229 1130 aa11.17□□□□□ -0.62
BEST3-211ENST00000552295 RAB15P59190 212 aa11.17□□□□□ -0.62
BEST3-211ENST00000552295 NALCNQ8IZF0 1738 aa11.17□□□□□ -0.62
BEST3-211ENST00000552295 DZIP3Q86Y13 1208 aaKnown RBP11.16□□□□□ -0.62
BEST3-211ENST00000552295 EPS8L1Q8TE68 723 aa11.16□□□□□ -0.62
BEST3-211ENST00000552295 ZNF395Q9H8N7 513 aaPredicted RBP11.16□□□□□ -0.62
BEST3-211ENST00000552295 TMPRSS4Q9NRS4 437 aa11.16□□□□□ -0.62
BEST3-211ENST00000552295 CDC14CA4D256 554 aa11.15□□□□□ -0.62
BEST3-211ENST00000552295 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
BEST3-211ENST00000552295 SV2AQ7L0J3 742 aa11.15□□□□□ -0.62
BEST3-211ENST00000552295 VWA5B2Q8N398 1253 aa11.15□□□□□ -0.62
BEST3-211ENST00000552295 ZNF784Q8NCA9 323 aaPredicted RBP11.15□□□□□ -0.62
BEST3-211ENST00000552295 XIRP1Q702N8 1843 aaKnown RBP11.14□□□□□ -0.63
BEST3-211ENST00000552295 EVC2Q86UK5 1308 aa11.14□□□□□ -0.63
BEST3-211ENST00000552295 ADH1AP07327 375 aa11.14□□□□□ -0.63
BEST3-211ENST00000552295 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
BEST3-211ENST00000552295 RNF217Q8TC41 542 aa11.14□□□□□ -0.63
BEST3-211ENST00000552295 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
BEST3-211ENST00000552295 FMN2Q9NZ56 1722 aa11.13□□□□□ -0.63
BEST3-211ENST00000552295 CDC42BPGQ6DT37 1551 aa11.13□□□□□ -0.63
BEST3-211ENST00000552295 RNF225M0QZC1 329 aaPredicted RBP11.13□□□□□ -0.63
BEST3-211ENST00000552295 RNFT1Q5M7Z0 435 aa11.13□□□□□ -0.63
BEST3-211ENST00000552295 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
BEST3-211ENST00000552295 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
BEST3-211ENST00000552295 ERVH48-1M5A8F1 160 aa11.12□□□□□ -0.63
BEST3-211ENST00000552295 GSK3AP49840 483 aa11.12□□□□□ -0.63
BEST3-211ENST00000552295 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
BEST3-211ENST00000552295 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
BEST3-211ENST00000552295 POLR3GLQ9BT43 218 aa11.12□□□□□ -0.63
BEST3-211ENST00000552295 USP32Q8NFA0 1604 aa11.12□□□□□ -0.63
BEST3-211ENST00000552295 ADGRL3Q9HAR2 1447 aa11.11□□□□□ -0.63
BEST3-211ENST00000552295 WASLO00401 505 aaPredicted RBP11.11□□□□□ -0.63
BEST3-211ENST00000552295 PTGIRP43119 386 aa11.11□□□□□ -0.63
BEST3-211ENST00000552295 ZNF385CQ66K41 422 aaPredicted RBP11.11□□□□□ -0.63
BEST3-211ENST00000552295 TMEM151AQ8N4L1 468 aa11.11□□□□□ -0.63
BEST3-211ENST00000552295 SVOPQ8N4V2 548 aa11.11□□□□□ -0.63
BEST3-211ENST00000552295 KCTD17Q8N5Z5 321 aa11.11□□□□□ -0.63
BEST3-211ENST00000552295 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
BEST3-211ENST00000552295 RGPD8O14715 1765 aaPredicted RBP11.11□□□□□ -0.63
BEST3-211ENST00000552295 ZNF335Q9H4Z2 1342 aaPredicted RBP11.1□□□□□ -0.63
BEST3-211ENST00000552295 ESPNB1AK53 854 aa11.1□□□□□ -0.63
BEST3-211ENST00000552295 LILRA1O75019 489 aa11.1□□□□□ -0.63
BEST3-211ENST00000552295 ATAD2Q6PL18 1390 aa11.1□□□□□ -0.63
BEST3-211ENST00000552295 ATP7BP35670 1465 aa11.1□□□□□ -0.63
BEST3-211ENST00000552295 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
BEST3-211ENST00000552295 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
BEST3-211ENST00000552295 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
BEST3-211ENST00000552295 RFC5P40937 340 aa11.09□□□□□ -0.63
BEST3-211ENST00000552295 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
BEST3-211ENST00000552295 RASSF7Q02833 373 aa11.09□□□□□ -0.63
BEST3-211ENST00000552295 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
BEST3-211ENST00000552295 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
BEST3-211ENST00000552295 NCOA3Q9Y6Q9 1424 aa11.09□□□□□ -0.63
BEST3-211ENST00000552295 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
BEST3-211ENST00000552295 SENP3-EIF4A1A0A087X0R7 540 aa11.08□□□□□ -0.64
BEST3-211ENST00000552295 GDF11O95390 407 aa11.08□□□□□ -0.64
BEST3-211ENST00000552295 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
BEST3-211ENST00000552295 FOXD4L5Q5VV16 416 aaPredicted RBP11.08□□□□□ -0.64
BEST3-211ENST00000552295 PRR36Q9H6K5 1346 aa11.08□□□□□ -0.64
BEST3-211ENST00000552295 NINLQ9Y2I6 1382 aa11.07□□□□□ -0.64
BEST3-211ENST00000552295 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
BEST3-211ENST00000552295 SEPT12Q8IYM1 358 aa11.07□□□□□ -0.64
BEST3-211ENST00000552295 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
BEST3-211ENST00000552295 LYSMD3Q7Z3D4 306 aa11.06□□□□□ -0.64
BEST3-211ENST00000552295 KDF1Q8NAX2 398 aaPredicted RBP11.06□□□□□ -0.64
BEST3-211ENST00000552295 WHAMMQ8TF30 809 aa11.06□□□□□ -0.64
BEST3-211ENST00000552295 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
BEST3-211ENST00000552295 CD163L1Q9NR16 1453 aa11.06□□□□□ -0.64
BEST3-211ENST00000552295 DCCP43146 1447 aa11.05□□□□□ -0.64
BEST3-211ENST00000552295 PPIP5K1Q6PFW1 1433 aa11.05□□□□□ -0.64
BEST3-211ENST00000552295 MON2Q7Z3U7 1717 aa11.05□□□□□ -0.64
BEST3-211ENST00000552295 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
BEST3-211ENST00000552295 SLC12A5Q9H2X9 1139 aa11.05□□□□□ -0.64
BEST3-211ENST00000552295 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
BEST3-211ENST00000552295 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
BEST3-211ENST00000552295 TMC1Q8TDI8 760 aa11.04□□□□□ -0.64
BEST3-211ENST00000552295 C19orf44Q9H6X5 657 aa11.04□□□□□ -0.64
BEST3-211ENST00000552295 PANK3Q9H999 370 aa11.04□□□□□ -0.64
BEST3-211ENST00000552295 ANKRD36BQ8N2N9 1353 aa11.03□□□□□ -0.64
BEST3-211ENST00000552295 TRIM34Q9BYJ4 488 aa11.03□□□□□ -0.64
BEST3-211ENST00000552295 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
BEST3-211ENST00000552295 CPSF1Q10570 1443 aaKnown RBP11.02□□□□□ -0.64
BEST3-211ENST00000552295 ARHGEF15O94989 841 aa11.02□□□□□ -0.65
BEST3-211ENST00000552295 TMEM259Q4ZIN3 620 aa11.02□□□□□ -0.65
BEST3-211ENST00000552295 PCMTD1Q96MG8 357 aaPredicted RBP11.02□□□□□ -0.65
BEST3-211ENST00000552295 CABP1Q9NZU7 370 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms