RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
RAB3IP-216ENST00000552199 ATG3Q9NT62 314 aa17■□□□□ 0.31
RAB3IP-216ENST00000552199 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
RAB3IP-216ENST00000552199 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
RAB3IP-216ENST00000552199 IL27Q8NEV9 243 aa17■□□□□ 0.31
RAB3IP-216ENST00000552199 CWC22Q9HCG8 908 aaKnown RBP17■□□□□ 0.31
RAB3IP-216ENST00000552199 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
RAB3IP-216ENST00000552199 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
RAB3IP-216ENST00000552199 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
RAB3IP-216ENST00000552199 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
RAB3IP-216ENST00000552199 LRP6O75581 1613 aa16.98■□□□□ 0.31
RAB3IP-216ENST00000552199 EXOC5O00471 708 aa16.98■□□□□ 0.31
RAB3IP-216ENST00000552199 TFCP2Q12800 502 aa16.98■□□□□ 0.31
RAB3IP-216ENST00000552199 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
RAB3IP-216ENST00000552199 TNNI3KQ59H18 835 aa16.98■□□□□ 0.31
RAB3IP-216ENST00000552199 ISCA1Q9BUE6 129 aa16.98■□□□□ 0.31
RAB3IP-216ENST00000552199 FPGT-TNNI3KV9GXZ4 949 aa16.98■□□□□ 0.31
RAB3IP-216ENST00000552199 BCL9O00512 1426 aa16.97■□□□□ 0.31
RAB3IP-216ENST00000552199 HIP1O00291 1037 aa16.97■□□□□ 0.31
RAB3IP-216ENST00000552199 STARD3NLO95772 234 aa16.97■□□□□ 0.31
RAB3IP-216ENST00000552199 SSFA2P28290 1259 aa16.97■□□□□ 0.31
RAB3IP-216ENST00000552199 BOLA2Q9H3K6 86 aa16.97■□□□□ 0.31
RAB3IP-216ENST00000552199 NUCB2P80303 420 aa16.96■□□□□ 0.31
RAB3IP-216ENST00000552199 TCIRG1Q13488 830 aa16.96■□□□□ 0.31
RAB3IP-216ENST00000552199 TMX3Q96JJ7 454 aa16.96■□□□□ 0.31
RAB3IP-216ENST00000552199 TRAK2O60296 914 aa16.96■□□□□ 0.3
RAB3IP-216ENST00000552199 TRIM28Q13263 835 aaKnown RBP16.96■□□□□ 0.3
RAB3IP-216ENST00000552199 CLEC17AQ6ZS10 378 aa16.96■□□□□ 0.3
RAB3IP-216ENST00000552199 SNX14Q9Y5W7 946 aa16.96■□□□□ 0.3
RAB3IP-216ENST00000552199 ATP5JP18859 108 aa16.95■□□□□ 0.3
RAB3IP-216ENST00000552199 CUL4AQ13619 759 aa16.95■□□□□ 0.3
RAB3IP-216ENST00000552199 ZGPATQ8N5A5 531 aaKnown RBP16.95■□□□□ 0.3
RAB3IP-216ENST00000552199 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
RAB3IP-216ENST00000552199 CHMP3Q9Y3E7 222 aa16.95■□□□□ 0.3
RAB3IP-216ENST00000552199 PHLPP1O60346 1717 aa16.95■□□□□ 0.3
RAB3IP-216ENST00000552199 CYP2E1P05181 493 aaPredicted RBP16.94■□□□□ 0.3
RAB3IP-216ENST00000552199 KIF6Q6ZMV9 814 aa16.94■□□□□ 0.3
RAB3IP-216ENST00000552199 PTH1RQ03431 593 aa16.94■□□□□ 0.3
RAB3IP-216ENST00000552199 AEBP2Q6ZN18 517 aaPredicted RBP16.94■□□□□ 0.3
RAB3IP-216ENST00000552199 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
RAB3IP-216ENST00000552199 SNRKQ9NRH2 765 aa16.94■□□□□ 0.3
RAB3IP-216ENST00000552199 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
RAB3IP-216ENST00000552199 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
RAB3IP-216ENST00000552199 PTMSP20962 102 aa16.93■□□□□ 0.3
RAB3IP-216ENST00000552199 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
RAB3IP-216ENST00000552199 ATG9AQ7Z3C6 839 aa16.93■□□□□ 0.3
RAB3IP-216ENST00000552199 RASEFQ8IZ41 740 aa16.93■□□□□ 0.3
RAB3IP-216ENST00000552199 FSD1Q9BTV5 496 aa16.93■□□□□ 0.3
RAB3IP-216ENST00000552199 CDCA7Q9BWT1 371 aaPredicted RBP16.93■□□□□ 0.3
RAB3IP-216ENST00000552199 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 KCNB2Q92953 911 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 FAM227BQ96M60 508 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 SLC4A9Q96Q91 983 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 NRAPQ86VF7 1730 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 DBNDD2Q9BQY9 259 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 GPR108Q9NPR9 543 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 THRAP3Q9Y2W1 955 aaKnown RBP16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 MAP3K15Q6ZN16 1313 aa16.92■□□□□ 0.3
RAB3IP-216ENST00000552199 PCCAP05165 728 aaPredicted RBP16.91■□□□□ 0.3
RAB3IP-216ENST00000552199 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
RAB3IP-216ENST00000552199 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
RAB3IP-216ENST00000552199 CCDC171Q6TFL3 1326 aa16.91■□□□□ 0.3
RAB3IP-216ENST00000552199 BAG4O95429 457 aaKnown RBP16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 PRIM1P49642 420 aaKnown RBP16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 GIGYF2Q6Y7W6 1299 aaKnown RBP16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 SYTL4Q96C24 671 aaPredicted RBP16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 TTC14Q96N46 770 aa16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 EYA2O00167 538 aa16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 CIAO1O76071 339 aa16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 PKP1Q13835 747 aa16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
RAB3IP-216ENST00000552199 DOT1LQ8TEK3 1739 aa16.89■□□□□ 0.3
RAB3IP-216ENST00000552199 A0A0D9SFI3 127 aa16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 SKOR2Q2VWA4 1001 aaPredicted RBP16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 MAP4K1Q92918 833 aa16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 EDC3Q96F86 508 aaKnown RBP16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 HAUS7Q99871 368 aa16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 PLA2G12BQ9BX93 195 aa16.89■□□□□ 0.29
RAB3IP-216ENST00000552199 MED23Q9ULK4 1368 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 LRRC24Q50LG9 513 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 ZBTB38Q8NAP3 1195 aaPredicted RBP16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 ZNF594Q96JF6 807 aaPredicted RBP16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 ARXQ96QS3 562 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 ZDHHC9Q9Y397 364 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 RFX7Q2KHR2 1363 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 GOLGA6L22H0YM25 854 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 DDB1Q16531 1140 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 HLFQ16534 295 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 TM6SF1Q9BZW5 370 aa16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 RBM8AQ9Y5S9 174 aaKnown RBP16.88■□□□□ 0.29
RAB3IP-216ENST00000552199 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
RAB3IP-216ENST00000552199 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
RAB3IP-216ENST00000552199 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
RAB3IP-216ENST00000552199 GZF1Q9H116 711 aaPredicted RBP16.87■□□□□ 0.29
RAB3IP-216ENST00000552199 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms