RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 ERFEQ4G0M1 354 aa23.75■■□□□ 1.39
DDX54-209ENST00000551912 CCDC191Q8NCU4 936 aa23.75■■□□□ 1.39
DDX54-209ENST00000551912 PXDNLA1KZ92 1463 aa23.75■■□□□ 1.39
DDX54-209ENST00000551912 PDE6BP35913 854 aa23.74■■□□□ 1.39
DDX54-209ENST00000551912 CWC25Q9NXE8 425 aaPredicted RBP23.74■■□□□ 1.39
DDX54-209ENST00000551912 A0A0G2JLW4 131 aa23.73■■□□□ 1.39
DDX54-209ENST00000551912 IGKV5-2P06315 115 aa23.73■■□□□ 1.39
DDX54-209ENST00000551912 DPEP1P16444 411 aa23.73■■□□□ 1.39
DDX54-209ENST00000551912 PDZRN3Q9UPQ7 1066 aa23.73■■□□□ 1.39
DDX54-209ENST00000551912 SH3TC1Q8TE82 1336 aa23.73■■□□□ 1.39
DDX54-209ENST00000551912 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
DDX54-209ENST00000551912 LINS1Q8NG48 757 aa23.72■■□□□ 1.39
DDX54-209ENST00000551912 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
DDX54-209ENST00000551912 KIF16BQ96L93 1317 aa23.72■■□□□ 1.39
DDX54-209ENST00000551912 ANKRD31Q8N7Z5 1873 aa23.72■■□□□ 1.39
DDX54-209ENST00000551912 KIAA1551Q9HCM1 1747 aa23.71■■□□□ 1.39
DDX54-209ENST00000551912 NEURL1BA8MQ27 555 aa23.71■■□□□ 1.39
DDX54-209ENST00000551912 H0YIN7 160 aa23.71■■□□□ 1.39
DDX54-209ENST00000551912 BCAR3O75815 825 aa23.71■■□□□ 1.39
DDX54-209ENST00000551912 CHRNA5P30532 468 aa23.71■■□□□ 1.39
DDX54-209ENST00000551912 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
DDX54-209ENST00000551912 SLC4A10Q6U841 1118 aa23.71■■□□□ 1.39
DDX54-209ENST00000551912 C2CD5Q86YS7 1000 aa23.71■■□□□ 1.39
DDX54-209ENST00000551912 N4BP2Q86UW6 1770 aaPredicted RBP23.7■■□□□ 1.39
DDX54-209ENST00000551912 RIC1Q4ADV7 1423 aa23.7■■□□□ 1.38
DDX54-209ENST00000551912 ZBTB38Q8NAP3 1195 aaPredicted RBP23.7■■□□□ 1.38
DDX54-209ENST00000551912 FAM89AQ96GI7 184 aa23.7■■□□□ 1.38
DDX54-209ENST00000551912 KCNA3P22001 575 aa23.69■■□□□ 1.38
DDX54-209ENST00000551912 SLC10A5Q5PT55 438 aa23.69■■□□□ 1.38
DDX54-209ENST00000551912 BEND3Q5T5X7 828 aa23.69■■□□□ 1.38
DDX54-209ENST00000551912 SYNE4Q8N205 404 aa23.69■■□□□ 1.38
DDX54-209ENST00000551912 GOLGB1Q14789 3259 aaKnown RBP23.69■■□□□ 1.38
DDX54-209ENST00000551912 KLRG2A4D1S0 409 aaPredicted RBP23.68■■□□□ 1.38
DDX54-209ENST00000551912 PCCAP05165 728 aaPredicted RBP23.68■■□□□ 1.38
DDX54-209ENST00000551912 RTL5Q5HYW3 569 aaPredicted RBP23.68■■□□□ 1.38
DDX54-209ENST00000551912 API5Q9BZZ5 524 aaKnown RBP23.68■■□□□ 1.38
DDX54-209ENST00000551912 IPO8O15397 1037 aaKnown RBP23.67■■□□□ 1.38
DDX54-209ENST00000551912 GCKRQ14397 625 aa23.67■■□□□ 1.38
DDX54-209ENST00000551912 ARHGAP45Q92619 1136 aa23.67■■□□□ 1.38
DDX54-209ENST00000551912 NLRP3Q96P20 1036 aa23.67■■□□□ 1.38
DDX54-209ENST00000551912 PIM2Q9P1W9 311 aa23.67■■□□□ 1.38
DDX54-209ENST00000551912 HCLS1P14317 486 aaPredicted RBP23.66■■□□□ 1.38
DDX54-209ENST00000551912 FRAT1Q92837 279 aaPredicted RBP23.66■■□□□ 1.38
DDX54-209ENST00000551912 SRCIN1Q9C0H9 1055 aa23.66■■□□□ 1.38
DDX54-209ENST00000551912 TNRC6CQ9HCJ0 1690 aaKnown RBP23.65■■□□□ 1.38
DDX54-209ENST00000551912 DCAF8L1A6NGE4 600 aa23.65■■□□□ 1.38
DDX54-209ENST00000551912 IRS4O14654 1257 aaPredicted RBP23.65■■□□□ 1.38
DDX54-209ENST00000551912 ALDH1L1O75891 902 aa23.65■■□□□ 1.38
DDX54-209ENST00000551912 SRGNP10124 158 aa23.65■■□□□ 1.38
DDX54-209ENST00000551912 HSP90B1P14625 803 aaKnown RBP23.65■■□□□ 1.38
DDX54-209ENST00000551912 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
DDX54-209ENST00000551912 MASTLQ96GX5 879 aa23.65■■□□□ 1.38
DDX54-209ENST00000551912 WWC3Q9ULE0 1092 aa23.65■■□□□ 1.38
DDX54-209ENST00000551912 GPR162Q16538 588 aa23.64■■□□□ 1.37
DDX54-209ENST00000551912 CRY2Q49AN0 593 aa23.64■■□□□ 1.37
DDX54-209ENST00000551912 ZNF622Q969S3 477 aaKnown RBP eCLIP23.64■■□□□ 1.374e-8■■□□□ 12.5
DDX54-209ENST00000551912 RCAN3Q9UKA8 241 aa23.64■■□□□ 1.37
DDX54-209ENST00000551912 COL11A2P13942 1736 aaPredicted RBP23.64■■□□□ 1.37
DDX54-209ENST00000551912 DLEC1Q9Y238 1755 aa23.63■■□□□ 1.37
DDX54-209ENST00000551912 NPR1P16066 1061 aa23.63■■□□□ 1.37
DDX54-209ENST00000551912 STYK1Q6J9G0 422 aa23.63■■□□□ 1.37
DDX54-209ENST00000551912 C3orf67Q6ZVT6 689 aa23.63■■□□□ 1.37
DDX54-209ENST00000551912 JARID2Q92833 1246 aaPredicted RBP23.63■■□□□ 1.37
DDX54-209ENST00000551912 CDHR2Q9BYE9 1310 aa23.62■■□□□ 1.37
DDX54-209ENST00000551912 BRCA1P38398 1863 aaKnown RBP23.62■■□□□ 1.37
DDX54-209ENST00000551912 H7C1W4 665 aa23.62■■□□□ 1.37
DDX54-209ENST00000551912 DALRD3Q5D0E6 543 aaKnown RBP23.62■■□□□ 1.37
DDX54-209ENST00000551912 ATF7IPQ6VMQ6 1270 aa23.62■■□□□ 1.37
DDX54-209ENST00000551912 UBE3BQ7Z3V4 1068 aa23.62■■□□□ 1.37
DDX54-209ENST00000551912 RPGRQ92834 1020 aaKnown RBP23.62■■□□□ 1.37
DDX54-209ENST00000551912 BCS1LQ9Y276 419 aa23.62■■□□□ 1.37
DDX54-209ENST00000551912 ZKSCAN2Q63HK3 967 aa23.61■■□□□ 1.37
DDX54-209ENST00000551912 TTLL6Q8N841 843 aa23.61■■□□□ 1.37
DDX54-209ENST00000551912 CNKSR1Q969H4 720 aa23.61■■□□□ 1.37
DDX54-209ENST00000551912 DDX60Q8IY21 1712 aaKnown RBP23.61■■□□□ 1.37
DDX54-209ENST00000551912 TRIM27P14373 513 aa23.6■■□□□ 1.37
DDX54-209ENST00000551912 YBX3P16989 372 aaKnown RBP eCLIP23.6■■□□□ 1.37
DDX54-209ENST00000551912 CCT4P50991 539 aaKnown RBP23.6■■□□□ 1.37
DDX54-209ENST00000551912 C9orf78Q9NZ63 289 aaPredicted RBP23.6■■□□□ 1.37
DDX54-209ENST00000551912 GRM8O00222 908 aa23.59■■□□□ 1.37
DDX54-209ENST00000551912 PDE8AO60658 829 aa23.59■■□□□ 1.37
DDX54-209ENST00000551912 LAMB2P55268 1798 aa23.59■■□□□ 1.37
DDX54-209ENST00000551912 ABCC4O15439 1325 aa23.59■■□□□ 1.37
DDX54-209ENST00000551912 ALDH1B1P30837 517 aa23.58■■□□□ 1.37
DDX54-209ENST00000551912 HOXA10P31260 410 aaPredicted RBP23.58■■□□□ 1.37
DDX54-209ENST00000551912 CASP7P55210 303 aa23.58■■□□□ 1.37
DDX54-209ENST00000551912 SF3B3Q15393 1217 aaKnown RBP23.58■■□□□ 1.37
DDX54-209ENST00000551912 RBM17Q96I25 401 aaKnown RBP23.58■■□□□ 1.37
DDX54-209ENST00000551912 GRIN3BO60391 1043 aa23.56■■□□□ 1.36
DDX54-209ENST00000551912 PRPF40BQ6NWY9 871 aaKnown RBP23.56■■□□□ 1.36
DDX54-209ENST00000551912 CLUAP1Q96AJ1 413 aa23.56■■□□□ 1.36
DDX54-209ENST00000551912 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
DDX54-209ENST00000551912 INTS3Q68E01 1043 aaKnown RBP23.55■■□□□ 1.36
DDX54-209ENST00000551912 PLA2G12BQ9BX93 195 aa23.55■■□□□ 1.36
DDX54-209ENST00000551912 TNNQ9UQP3 1299 aa23.55■■□□□ 1.36
DDX54-209ENST00000551912 UTRNP46939 3433 aa23.55■■□□□ 1.36
DDX54-209ENST00000551912 CTSWP56202 376 aa23.54■■□□□ 1.36
DDX54-209ENST00000551912 CCDC152Q4G0S7 254 aa23.54■■□□□ 1.36
DDX54-209ENST00000551912 DDX46Q7L014 1031 aaKnown RBP23.54■■□□□ 1.36
DDX54-209ENST00000551912 FTSJ3Q8IY81 847 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms