RNA–Protein interactions for RNA: ENST00000551630.1

PTCH1-224, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-224ENST00000551630 GTF2E1P29083 439 aaPredicted RBP19.44■□□□□ 0.7
PTCH1-224ENST00000551630 ST5P78524 1137 aa19.44■□□□□ 0.7
PTCH1-224ENST00000551630 TRIM28Q13263 835 aaKnown RBP19.44■□□□□ 0.7
PTCH1-224ENST00000551630 BEND3Q5T5X7 828 aa19.44■□□□□ 0.7
PTCH1-224ENST00000551630 CWC25Q9NXE8 425 aaPredicted RBP19.44■□□□□ 0.7
PTCH1-224ENST00000551630 KIF13BQ9NQT8 1826 aa19.44■□□□□ 0.7
PTCH1-224ENST00000551630 RTL5Q5HYW3 569 aaPredicted RBP19.43■□□□□ 0.7
PTCH1-224ENST00000551630 SYNE4Q8N205 404 aa19.43■□□□□ 0.7
PTCH1-224ENST00000551630 CCDC191Q8NCU4 936 aa19.43■□□□□ 0.7
PTCH1-224ENST00000551630 NLGN2Q8NFZ4 835 aa19.43■□□□□ 0.7
PTCH1-224ENST00000551630 LINS1Q8NG48 757 aa19.43■□□□□ 0.7
PTCH1-224ENST00000551630 API5Q9BZZ5 524 aaKnown RBP19.43■□□□□ 0.7
PTCH1-224ENST00000551630 TRMT112Q9UI30 125 aaKnown RBP19.43■□□□□ 0.7
PTCH1-224ENST00000551630 ANKRD31Q8N7Z5 1873 aa19.43■□□□□ 0.7
PTCH1-224ENST00000551630 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
PTCH1-224ENST00000551630 PXDNLA1KZ92 1463 aa19.42■□□□□ 0.7
PTCH1-224ENST00000551630 JARID2Q92833 1246 aaPredicted RBP19.42■□□□□ 0.7
PTCH1-224ENST00000551630 FAM89AQ96GI7 184 aa19.42■□□□□ 0.7
PTCH1-224ENST00000551630 CD2APQ9Y5K6 639 aa19.42■□□□□ 0.7
PTCH1-224ENST00000551630 TRIM27P14373 513 aa19.41■□□□□ 0.7
PTCH1-224ENST00000551630 ATF7IPQ6VMQ6 1270 aa19.41■□□□□ 0.7
PTCH1-224ENST00000551630 SYT17Q9BSW7 474 aa19.41■□□□□ 0.7
PTCH1-224ENST00000551630 KIAA1551Q9HCM1 1747 aa19.41■□□□□ 0.7
PTCH1-224ENST00000551630 SH3TC1Q8TE82 1336 aa19.41■□□□□ 0.7
PTCH1-224ENST00000551630 IPO8O15397 1037 aaKnown RBP19.4■□□□□ 0.7
PTCH1-224ENST00000551630 GCKRQ14397 625 aa19.4■□□□□ 0.7
PTCH1-224ENST00000551630 ZKSCAN2Q63HK3 967 aa19.4■□□□□ 0.7
PTCH1-224ENST00000551630 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
PTCH1-224ENST00000551630 SRCIN1Q9C0H9 1055 aa19.4■□□□□ 0.7
PTCH1-224ENST00000551630 CHRNA5P30532 468 aa19.39■□□□□ 0.69
PTCH1-224ENST00000551630 ZBTB38Q8NAP3 1195 aaPredicted RBP19.39■□□□□ 0.69
PTCH1-224ENST00000551630 CLUAP1Q96AJ1 413 aa19.39■□□□□ 0.69
PTCH1-224ENST00000551630 BRIP1Q9BX63 1249 aa19.39■□□□□ 0.69
PTCH1-224ENST00000551630 ABCC4O15439 1325 aa19.39■□□□□ 0.69
PTCH1-224ENST00000551630 RNF123Q5XPI4 1314 aa19.39■□□□□ 0.69
PTCH1-224ENST00000551630 COL11A2P13942 1736 aaPredicted RBP19.39■□□□□ 0.69
PTCH1-224ENST00000551630 PCCAP05165 728 aaPredicted RBP19.38■□□□□ 0.69
PTCH1-224ENST00000551630 HCLS1P14317 486 aaPredicted RBP19.38■□□□□ 0.69
PTCH1-224ENST00000551630 DPEP1P16444 411 aa19.38■□□□□ 0.69
PTCH1-224ENST00000551630 C3orf67Q6ZVT6 689 aa19.38■□□□□ 0.69
PTCH1-224ENST00000551630 N4BP2Q86UW6 1770 aaPredicted RBP19.38■□□□□ 0.69
PTCH1-224ENST00000551630 WWC3Q9ULE0 1092 aa19.38■□□□□ 0.69
PTCH1-224ENST00000551630 DDX60Q8IY21 1712 aaKnown RBP19.37■□□□□ 0.69
PTCH1-224ENST00000551630 A0A0G2JLW4 131 aa19.37■□□□□ 0.69
PTCH1-224ENST00000551630 IRS4O14654 1257 aaPredicted RBP19.37■□□□□ 0.69
PTCH1-224ENST00000551630 PLIN1O60240 522 aa19.37■□□□□ 0.69
PTCH1-224ENST00000551630 ALDH1L1O75891 902 aa19.37■□□□□ 0.69
PTCH1-224ENST00000551630 UBE3BQ7Z3V4 1068 aa19.37■□□□□ 0.69
PTCH1-224ENST00000551630 C2CD5Q86YS7 1000 aa19.37■□□□□ 0.69
PTCH1-224ENST00000551630 RIC1Q4ADV7 1423 aa19.36■□□□□ 0.69
PTCH1-224ENST00000551630 PDE6BP35913 854 aa19.36■□□□□ 0.69
PTCH1-224ENST00000551630 TGFB2P61812 414 aa19.36■□□□□ 0.69
PTCH1-224ENST00000551630 LAMB2P55268 1798 aa19.36■□□□□ 0.69
PTCH1-224ENST00000551630 SRCAPQ6ZRS2 3230 aa19.35■□□□□ 0.69
PTCH1-224ENST00000551630 H7C1W4 665 aa19.35■□□□□ 0.69
PTCH1-224ENST00000551630 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
PTCH1-224ENST00000551630 SLC10A5Q5PT55 438 aa19.35■□□□□ 0.69
PTCH1-224ENST00000551630 CDHR2Q9BYE9 1310 aa19.34■□□□□ 0.69
PTCH1-224ENST00000551630 GRM8O00222 908 aa19.34■□□□□ 0.69
PTCH1-224ENST00000551630 RLBP1P12271 317 aa19.34■□□□□ 0.69
PTCH1-224ENST00000551630 CASP7P55210 303 aa19.34■□□□□ 0.69
PTCH1-224ENST00000551630 FTSJ3Q8IY81 847 aaKnown RBP19.34■□□□□ 0.69
PTCH1-224ENST00000551630 DZIP1LQ8IYY4 767 aaKnown RBP19.34■□□□□ 0.69
PTCH1-224ENST00000551630 TMEM57Q8N5G2 664 aa19.34■□□□□ 0.69
PTCH1-224ENST00000551630 C9orf78Q9NZ63 289 aaPredicted RBP19.34■□□□□ 0.69
PTCH1-224ENST00000551630 H0YIN7 160 aa19.33■□□□□ 0.68
PTCH1-224ENST00000551630 KCNA3P22001 575 aa19.33■□□□□ 0.68
PTCH1-224ENST00000551630 NLRP3Q96P20 1036 aa19.33■□□□□ 0.68
PTCH1-224ENST00000551630 DLEC1Q9Y238 1755 aa19.33■□□□□ 0.68
PTCH1-224ENST00000551630 KLRG2A4D1S0 409 aaPredicted RBP19.32■□□□□ 0.68
PTCH1-224ENST00000551630 SRGNP10124 158 aa19.32■□□□□ 0.68
PTCH1-224ENST00000551630 INTS3Q68E01 1043 aaKnown RBP19.32■□□□□ 0.68
PTCH1-224ENST00000551630 PANK1Q8TE04 598 aa19.32■□□□□ 0.68
PTCH1-224ENST00000551630 ZNF622Q969S3 477 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTCH1-224ENST00000551630 NBPF7P0C2Y1 421 aaPredicted RBP19.31■□□□□ 0.68
PTCH1-224ENST00000551630 CRY2Q49AN0 593 aa19.31■□□□□ 0.68
PTCH1-224ENST00000551630 PDE8AO60658 829 aa19.3■□□□□ 0.68
PTCH1-224ENST00000551630 MASTLQ96GX5 879 aa19.3■□□□□ 0.68
PTCH1-224ENST00000551630 CCDC85AQ96PX6 553 aaPredicted RBP19.3■□□□□ 0.68
PTCH1-224ENST00000551630 USP44Q9H0E7 712 aa19.3■□□□□ 0.68
PTCH1-224ENST00000551630 PDZRN3Q9UPQ7 1066 aa19.3■□□□□ 0.68
PTCH1-224ENST00000551630 BRCA1P38398 1863 aaKnown RBP19.3■□□□□ 0.68
PTCH1-224ENST00000551630 NPR1P16066 1061 aa19.29■□□□□ 0.68
PTCH1-224ENST00000551630 RRP1P56182 461 aaKnown RBP19.29■□□□□ 0.68
PTCH1-224ENST00000551630 CTSWP56202 376 aa19.29■□□□□ 0.68
PTCH1-224ENST00000551630 C20orf194Q5TEA3 1177 aa19.29■□□□□ 0.68
PTCH1-224ENST00000551630 STYK1Q6J9G0 422 aa19.29■□□□□ 0.68
PTCH1-224ENST00000551630 ITPRIPQ8IWB1 547 aa19.29■□□□□ 0.68
PTCH1-224ENST00000551630 PELP1Q8IZL8 1130 aaKnown RBP19.29■□□□□ 0.68
PTCH1-224ENST00000551630 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.29■□□□□ 0.68
PTCH1-224ENST00000551630 RPGRQ92834 1020 aaKnown RBP19.29■□□□□ 0.68
PTCH1-224ENST00000551630 SUCLG2Q96I99 432 aa19.29■□□□□ 0.68
PTCH1-224ENST00000551630 MEIS3Q99687 375 aa19.29■□□□□ 0.68
PTCH1-224ENST00000551630 UTYO14607 1347 aa19.28■□□□□ 0.68
PTCH1-224ENST00000551630 EPHA10Q5JZY3 1008 aa19.28■□□□□ 0.68
PTCH1-224ENST00000551630 PLA2G12BQ9BX93 195 aa19.28■□□□□ 0.68
PTCH1-224ENST00000551630 PIM2Q9P1W9 311 aa19.28■□□□□ 0.68
PTCH1-224ENST00000551630 CACNA1SQ13698 1873 aa19.27■□□□□ 0.68
PTCH1-224ENST00000551630 HSP90B1P14625 803 aaKnown RBP19.27■□□□□ 0.68
PTCH1-224ENST00000551630 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms