RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, human

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCH1-223	ENST00000551623	EML1	O00423	815 aa		4.73	□□□□□ -1.65
PTCH1-223	ENST00000551623	JAG1	P78504	1218 aa		4.73	□□□□□ -1.65
PTCH1-223	ENST00000551623	CYB5RL	Q6IPT4	315 aa		4.73	□□□□□ -1.65
PTCH1-223	ENST00000551623	NEUROD4	Q9HD90	331 aa		4.73	□□□□□ -1.65
PTCH1-223	ENST00000551623	CHIC2	Q9UKJ5	165 aa		4.73	□□□□□ -1.65
PTCH1-223	ENST00000551623	GPC6	Q9Y625	555 aa	Predicted RBP	4.73	□□□□□ -1.65
PTCH1-223	ENST00000551623	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.72	□□□□□ -1.65
PTCH1-223	ENST00000551623	ZDHHC1	Q8WTX9	485 aa		4.72	□□□□□ -1.65
PTCH1-223	ENST00000551623	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.72	□□□□□ -1.65
PTCH1-223	ENST00000551623	UBE2O	Q9C0C9	1292 aa	Known RBP	4.72	□□□□□ -1.65
PTCH1-223	ENST00000551623	SLC6A14	Q9UN76	642 aa		4.72	□□□□□ -1.65
PTCH1-223	ENST00000551623	IFT140	Q96RY7	1462 aa		4.72	□□□□□ -1.65
PTCH1-223	ENST00000551623	MROH2B	Q7Z745	1585 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	SOCS7	O14512	581 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	MED26	O95402	600 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	KCNQ4	P56696	695 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	TBC1D8B	Q0IIM8	1120 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	PSAPL1	Q6NUJ1	521 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	FBXO11	Q86XK2	927 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	DTWD1	Q8N5C7	304 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	BHMT	Q93088	406 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	L3MBTL2	Q969R5	705 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	BRD7	Q9NPI1	651 aa		4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	ZNF608	Q9ULD9	1512 aa	Predicted RBP	4.71	□□□□□ -1.66
PTCH1-223	ENST00000551623	C7orf43	Q8WVR3	580 aa		4.7	□□□□□ -1.66
PTCH1-223	ENST00000551623	IGFLR1	Q9H665	355 aa		4.7	□□□□□ -1.66
PTCH1-223	ENST00000551623	GOPC	Q9HD26	462 aa		4.7	□□□□□ -1.66
PTCH1-223	ENST00000551623	KCNH4	Q9UQ05	1017 aa		4.7	□□□□□ -1.66
PTCH1-223	ENST00000551623	RGS9	O75916	674 aa	Predicted RBP	4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	NOS2	P35228	1153 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	EIF4G2	P78344	907 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	TEAD4	Q15561	434 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	MSL1	Q68DK7	614 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	IGF2-AS	Q6U949	168 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	DZIP1L	Q8IYY4	767 aa	Known RBP	4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	MTMR14	Q8NCE2	650 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	RHPN1	Q8TCX5	695 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	CEP63	Q96MT8	703 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	NAGPA	Q9UK23	515 aa		4.69	□□□□□ -1.66
PTCH1-223	ENST00000551623	CLASP1	Q7Z460	1538 aa		4.68	□□□□□ -1.66
PTCH1-223	ENST00000551623	BACH1	O14867	736 aa		4.68	□□□□□ -1.66
PTCH1-223	ENST00000551623	PTCD1	O75127	700 aa	Known RBP	4.68	□□□□□ -1.66
PTCH1-223	ENST00000551623	TGFB1	P01137	390 aa		4.68	□□□□□ -1.66
PTCH1-223	ENST00000551623	MAP7D1	Q3KQU3	841 aa		4.68	□□□□□ -1.66
PTCH1-223	ENST00000551623	EIF4G3	O43432	1585 aa	Known RBP	4.68	□□□□□ -1.66
PTCH1-223	ENST00000551623	APBB1	O00213	710 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	GSC2	O15499	205 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	TYRO3	Q06418	890 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	PLPP7	Q8NBV4	271 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	BANK1	Q8NDB2	785 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	HSH2D	Q96JZ2	352 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	KRTAP4-11	Q9BYQ6	195 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	DNAJB12	Q9NXW2	375 aa	Known RBP	4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	ZNF232	Q9UNY5	417 aa		4.67	□□□□□ -1.66
PTCH1-223	ENST00000551623	ADAMTS4	O75173	837 aa		4.66	□□□□□ -1.66
PTCH1-223	ENST00000551623	IGLV1-40	P01703	118 aa		4.66	□□□□□ -1.66
PTCH1-223	ENST00000551623	GRIK5	Q16478	980 aa		4.66	□□□□□ -1.66
PTCH1-223	ENST00000551623	SH3PXD2A	Q5TCZ1	1133 aa		4.66	□□□□□ -1.66
PTCH1-223	ENST00000551623	AKTIP	Q9H8T0	292 aa		4.66	□□□□□ -1.66
PTCH1-223	ENST00000551623	EFCC1	Q9HA90	598 aa		4.66	□□□□□ -1.66
PTCH1-223	ENST00000551623	ANKIB1	Q9P2G1	1089 aa		4.66	□□□□□ -1.66
PTCH1-223	ENST00000551623	SFI1	A8K8P3	1242 aa		4.65	□□□□□ -1.67
PTCH1-223	ENST00000551623	SPINK2	P20155	84 aa		4.65	□□□□□ -1.67
PTCH1-223	ENST00000551623	LCE4A	Q5TA78	99 aa		4.65	□□□□□ -1.67
PTCH1-223	ENST00000551623	PCDHGA11	Q9Y5H2	935 aa		4.65	□□□□□ -1.67
PTCH1-223	ENST00000551623	TARBP1	Q13395	1621 aa	Known RBP	4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	TOPBP1	Q92547	1522 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	SERTM1	A2A2V5	107 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	DEAF1	O75398	565 aa	Predicted RBP	4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	ALX3	O95076	343 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	EPHA4	P54764	986 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	TBCEL	Q5QJ74	424 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	WFDC8	Q8IUA0	241 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	SLC9A9	Q8IVB4	645 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	LPIN3	Q9BQK8	851 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	ZNF358	Q9NW07	568 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	FRRS1L	Q9P0K9	344 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	RAX	Q9Y2V3	346 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	ABCC8	Q09428	1581 aa		4.64	□□□□□ -1.67
PTCH1-223	ENST00000551623	CHD1	O14646	1710 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	DLL1	O00548	723 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	GRIK1	P39086	918 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	BRPF1	P55201	1214 aa	Predicted RBP	4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	C1orf53	Q5VUE5	145 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	OGFOD2	Q6N063	350 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	INTS5	Q6P9B9	1019 aa	Known RBP	4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	FAM35A	Q86V20	835 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	TMEM130	Q8N3G9	435 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	ZNF280C	Q8ND82	737 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	SUSD3	Q96L08	255 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	ADGRE2	Q9UHX3	823 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623	WDR97	A6NE52	1622 aa		4.63	□□□□□ -1.67
PTCH1-223	ENST00000551623		F8W735	103 aa	Predicted RBP	4.62	□□□□□ -1.67
PTCH1-223	ENST00000551623	WNT11	O96014	354 aa		4.62	□□□□□ -1.67
PTCH1-223	ENST00000551623	CPB1	P15086	417 aa		4.62	□□□□□ -1.67
PTCH1-223	ENST00000551623	DTX1	Q86Y01	620 aa		4.62	□□□□□ -1.67
PTCH1-223	ENST00000551623	ZDHHC13	Q8IUH4	622 aa		4.62	□□□□□ -1.67
PTCH1-223	ENST00000551623	PNMA5	Q96PV4	448 aa		4.62	□□□□□ -1.67

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