RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	RNF181	Q9P0P0	153 aa		11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	GOLGB1	Q14789	3259 aa	Known RBP	11.65	□□□□□ -0.54
ATXN2-223	ENST00000551551	NRXN2	Q9P2S2	1712 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	RIC1	Q4ADV7	1423 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	VEGFA	P15692	232 aa	Predicted RBP	11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	GOLGA2	Q08379	1002 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	PDIA6	Q15084	440 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	HLF	Q16534	295 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	CRY2	Q49AN0	593 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	MBIP	Q9NS73	344 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	ADCY9	O60503	1353 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	DLG5	Q8TDM6	1919 aa		11.64	□□□□□ -0.55
ATXN2-223	ENST00000551551	GLTPD2	A6NH11	291 aa		11.63	□□□□□ -0.55
ATXN2-223	ENST00000551551	PRPF40B	Q6NWY9	871 aa	Known RBP	11.63	□□□□□ -0.55
ATXN2-223	ENST00000551551	WWC1	Q8IX03	1113 aa		11.63	□□□□□ -0.55
ATXN2-223	ENST00000551551	SUPT20H	Q8NEM7	779 aa		11.63	□□□□□ -0.55
ATXN2-223	ENST00000551551	ZBTB3	Q9H5J0	574 aa		11.63	□□□□□ -0.55
ATXN2-223	ENST00000551551	MYH16	Q9H6N6	1097 aa		11.63	□□□□□ -0.55
ATXN2-223	ENST00000551551	SH3TC1	Q8TE82	1336 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	KDM3B	Q7LBC6	1761 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	C21orf2	O43822	256 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	PIP4K2A	P48426	406 aa	Predicted RBP	11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	FSTL1	Q12841	308 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	ERFE	Q4G0M1	354 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	TTLL7	Q6ZT98	887 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	RIC3	Q7Z5B4	369 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	XAGE3	Q8WTP9	111 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	TRMT112	Q9UI30	125 aa	Known RBP	11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	ARFGEF1	Q9Y6D6	1849 aa		11.62	□□□□□ -0.55
ATXN2-223	ENST00000551551	IQCA1L	A6NCM1	817 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	TULP1	O00294	542 aa	Predicted RBP	11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	NEXN	Q0ZGT2	675 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	AIMP1	Q12904	312 aa	Known RBP	11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	LRP10	Q7Z4F1	713 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	CCDC191	Q8NCU4	936 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	RBM46	Q8TBY0	533 aa	Known RBP	11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	JDP2	Q8WYK2	163 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	PSMD1	Q99460	953 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	CHPF2	Q9P2E5	772 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	SCN7A	Q01118	1682 aa		11.61	□□□□□ -0.55
ATXN2-223	ENST00000551551	LAMB4	A4D0S4	1761 aa		11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	SUSD4	Q5VX71	490 aa		11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	DDX46	Q7L014	1031 aa	Known RBP	11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	NLRP10	Q86W26	655 aa		11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	C7orf43	Q8WVR3	580 aa		11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	ZNF428	Q96B54	188 aa		11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	WWC3	Q9ULE0	1092 aa		11.6	□□□□□ -0.55
ATXN2-223	ENST00000551551	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.59	□□□□□ -0.55
ATXN2-223	ENST00000551551	AFDN	P55196	1824 aa	Known RBP	11.59	□□□□□ -0.55
ATXN2-223	ENST00000551551	NTSR2	O95665	410 aa		11.59	□□□□□ -0.55
ATXN2-223	ENST00000551551	GPT	P24298	496 aa		11.59	□□□□□ -0.55
ATXN2-223	ENST00000551551	FAM177B	A6PVY3	158 aa		11.58	□□□□□ -0.56
ATXN2-223	ENST00000551551	APLP1	P51693	650 aa		11.58	□□□□□ -0.56
ATXN2-223	ENST00000551551	SP8	Q8IXZ3	490 aa		11.58	□□□□□ -0.56
ATXN2-223	ENST00000551551	BRCA1	P38398	1863 aa	Known RBP	11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	BCOR	Q6W2J9	1755 aa		11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	SF3B3	Q15393	1217 aa	Known RBP	11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	TWISTNB	Q3B726	338 aa	Predicted RBP	11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	KSR2	Q6VAB6	950 aa		11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	NUTM1	Q86Y26	1132 aa		11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	SMC1B	Q8NDV3	1235 aa		11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	ZNF526	Q8TF50	670 aa	Predicted RBP	11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	NECTIN2	Q92692	538 aa		11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	ISCA1	Q9BUE6	129 aa		11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	ATP6V0A2	Q9Y487	856 aa		11.57	□□□□□ -0.56
ATXN2-223	ENST00000551551	CCER2	I3L3R5	266 aa		11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	NFKBIE	O00221	500 aa		11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	KIF3C	O14782	793 aa		11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	HSPA6	P17066	643 aa		11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	EIF6	P56537	245 aa	Known RBP	11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	PNMA8A	Q86V59	439 aa	Predicted RBP	11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	METTL22	Q9BUU2	404 aa	Predicted RBP	11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	KIAA1551	Q9HCM1	1747 aa		11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	CWC25	Q9NXE8	425 aa	Predicted RBP	11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	UBN2	Q6ZU65	1347 aa		11.56	□□□□□ -0.56
ATXN2-223	ENST00000551551	SENP3-EIF4A1	A0A087X0R7	540 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	PPEF1	O14829	653 aa	Predicted RBP	11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	PROSER3	Q2NL68	480 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	CCDC152	Q4G0S7	254 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	FAM9B	Q8IZU0	186 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	SYNE4	Q8N205	404 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	CCDC24	Q8N4L8	307 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	C8orf58	Q8NAV2	365 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	RRAGC	Q9HB90	399 aa		11.55	□□□□□ -0.56
ATXN2-223	ENST00000551551	DLEC1	Q9Y238	1755 aa		11.54	□□□□□ -0.56
ATXN2-223	ENST00000551551	ELL2	O00472	640 aa	Predicted RBP	11.54	□□□□□ -0.56
ATXN2-223	ENST00000551551	PCCA	P05165	728 aa	Predicted RBP	11.54	□□□□□ -0.56
ATXN2-223	ENST00000551551	IARS	P41252	1262 aa	Known RBP	11.54	□□□□□ -0.56
ATXN2-223	ENST00000551551	GRAP	Q13588	217 aa		11.54	□□□□□ -0.56
ATXN2-223	ENST00000551551	GPC2	Q8N158	579 aa		11.54	□□□□□ -0.56
ATXN2-223	ENST00000551551	GRAPL	Q8TC17	118 aa	Predicted RBP	11.54	□□□□□ -0.56
ATXN2-223	ENST00000551551	NUP98	P52948	1817 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551		E9PSI1	815 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	FZD9	O00144	591 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	IRS4	O14654	1257 aa	Predicted RBP	11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	PDE8A	O60658	829 aa		11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	CT47B1	P0C2W7	299 aa	Predicted RBP	11.53	□□□□□ -0.56
ATXN2-223	ENST00000551551	TNIP1	Q15025	636 aa		11.53	□□□□□ -0.56

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